Os02g0809500

From RiceWiki
Revision as of 19:25, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0809500

Description

Conserved hypothetical protein

Version

NM_001054998.1 GI:115449422 GeneID:4331088

Length

3350 bp

Definition

Oryza sativa Japonica Group Os02g0809500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35483499..35486848

Sequence Coding Region

35483864..35484101,35484234..35484610,35484701..35484950,35485074..35485239,35485623..35485725
,35485821..35485946,35486086..35486299,35486396..35486676

Expression

GEO Profiles:Os02g0809500

Genome Context

<gbrowseImage1> name=NC_008395:35483499..35486848 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:35483499..35486848 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgagtaatggccacagcaacagcagcaagagccttgaaaggtttatatctcggagggctctgcagatggggagctctgctccctgcaagacatgggcactgggcttcttctgtggtgtctgcattgtgtacctgtttggtgttgctctcccacctatccaaatcctgatgatccgatcggtacatccaccggttcggcgagcaatcttgttgaattcaacatcaactgaacctggtggagctacagaaacagatgacttatctgttttacaagaaaagatagaaatagccaccaatagcaaggacatcaatgaagctgataaaatgcatttgtataatgcttggagcactttactggatacgaccagtgatgaagttatgaaaagttcagacgtgccgcggccgcctcatctggagaattgcaggcttaaatgggaaagaaataagaaatttgacagttatagcgacaacggcgtatttcctccttggacattatggaaagggtcacttggtcttgagttattcaaccagaactattcagattcagaagagtggaggcaaatgtttttcaggtcaaatgctaaatctgacagggcgccatatccaccttggattgcaggatcagatgaagaaaactatccactgaccagacaagtgcagagagatgtatggattcatcaacatcctccaaactgcagtgatccaagcttgaggtttctctatgcagactgggagaggctaccgggatttggtataggtgcgcaactcgctggaatgtcgggacttcttgctattgctataaaagagagaaggattctagttgcaggatactacaaccgtgctgatcacaatggttgtaaaggcctagcaagatctagctggtcatgctactttttacctgaaacatctgcagactgccagaaacgtgctttagatctcatgcaaagcaaagattctagggaaaatggaattataaaagttaaggaaaactatacctccaagcaaatatgggctgggcatatacctaggatatgggggagaccatggaaatatatgcaaccgacaacagagatagatgggagattggttaaaaatcattgtaaaatggatcggagatggtggattgcacaggccctgagatacctaatgaggttccagtcagagtacatgtgcagattactgaatgtggctagacattcagcatttggcatgcaggcagcaaagatggttcttgaaaatgtcccagatccaccaaagcctagcattagcagaacagaatctgacattgagcgacttgtgtggtcggagcataaaccatatatacccgggcctcttatcagtatgcatgtaaggatgggagataaagcttgtgaaatggaagtagttggctttgagaaatacatggagttggctggtcgtcttcgaaaacgttttccaagtctcaagaacatctggctttctactgaaatgcaggaagttatcgacgaaacaaaattatatcccaaatggaatttctatttcacaaatgtgacgcgccaagatgtcaatgtgagcatggcaatgtatgaggccagcctgggccgtgagaccagcacaaactatccccttgtcaatttcatcatggccactgaagcagatttcttcattggagccctgggatcaacctggtgctacctcatcgacggcatgcggaacaccgcaggaaaggtgatgtctggctatctgtcggtgaacaaggaccggttctggtaa</cdnaseq>

Protein Sequence

<aaseq>MMSNGHSNSSKSLERFISRRALQMGSSAPCKTWALGFFCGVCIV YLFGVALPPIQILMIRSVHPPVRRAILLNSTSTEPGGATETDDLSVLQEKIEIATNSK DINEADKMHLYNAWSTLLDTTSDEVMKSSDVPRPPHLENCRLKWERNKKFDSYSDNGV FPPWTLWKGSLGLELFNQNYSDSEEWRQMFFRSNAKSDRAPYPPWIAGSDEENYPLTR QVQRDVWIHQHPPNCSDPSLRFLYADWERLPGFGIGAQLAGMSGLLAIAIKERRILVA GYYNRADHNGCKGLARSSWSCYFLPETSADCQKRALDLMQSKDSRENGIIKVKENYTS KQIWAGHIPRIWGRPWKYMQPTTEIDGRLVKNHCKMDRRWWIAQALRYLMRFQSEYMC RLLNVARHSAFGMQAAKMVLENVPDPPKPSISRTESDIERLVWSEHKPYIPGPLISMH VRMGDKACEMEVVGFEKYMELAGRLRKRFPSLKNIWLSTEMQEVIDETKLYPKWNFYF TNVTRQDVNVSMAMYEASLGRETSTNYPLVNFIMATEADFFIGALGSTWCYLIDGMRN TAGKVMSGYLSVNKDRFW</aaseq>

Gene Sequence

<dnaseqindica>366..603#736..1112#1203..1452#1576..1741#2125..2227#2323..2448#2588..2801#2898..3178#tggtttgtcagtgacttctgcatgtggctgtgttgtgcgactaccttggtccttcctgattagtgatggggtttagcgcatggtaatctgtttaatgtgcatgcatgccgatgatctttcatgtagactgtatattcctgtgcttagaagccatctgtggatcaaatccatgttgtcttccaagcaattagctcatctgtgatttgatttgtactttactctttgggaagaatttttttgtctttatagcttttcttgcatgaattccattccatgatgcatttggtgtttcttgattggaggcagtgtttgaatgcaagggtcaggttgcgctggtaggtatctgaggaattcaggaattgaggatgatgagtaatggccacagcaacagcagcaagagccttgaaaggtttatatctcggagggctctgcagatggggagctctgctccctgcaagacatgggcactgggcttcttctgtggtgtctgcattgtgtacctgtttggtgttgctctcccacctatccaaatcctgatgatccgatcggtacatccaccggttcggcgagcaatcttgttgaattcaacatcaactgaacctggtattttgcgaacaccatttcgcataaaaaattcagtagtagtgtagtactatatgttcatctaggctgaatgtattttttcttttccttttagctgtgacaatgtctgtgtaaccagcttcttccatgcaggtggagctacagaaacagatgacttatctgttttacaagaaaagatagaaatagccaccaatagcaaggacatcaatgaagctgataaaatgcatttgtataatgcttggagcactttactggatacgaccagtgatgaagttatgaaaagttcagacgtgccgcggccgcctcatctggagaattgcaggcttaaatgggaaagaaataagaaatttgacagttatagcgacaacggcgtatttcctccttggacattatggaaagggtcacttggtcttgagttattcaaccagaactattcagattcagaagagtggaggcaaatgtttttcaggtcaaatgctaaatctgacagggcgccatatccaccttgggtgtgtaaacttgcctgaactcgtaattgtcttgtcagtactactatgaatgcagtattctaacttttgagttacaacaaaactttaaagattgcaggatcagatgaagaaaactatccactgaccagacaagtgcagagagatgtatggattcatcaacatcctccaaactgcagtgatccaagcttgaggtttctctatgcagactgggagaggctaccgggatttggtataggtgcgcaactcgctggaatgtcgggacttcttgctattgctataaaagagagaaggattctagttgcaggatactacaaccgtgctgatcacaatggttgtaaaggtaggaacaatccagcttaccttgtagattatgaattgataatatgatatgtgtagtgctacctcaagttgtaacttttaactgacatgataactgagataactgtcaatgttcaattttcaggcctagcaagatctagctggtcatgctactttttacctgaaacatctgcagactgccagaaacgtgctttagatctcatgcaaagcaaagattctagggaaaatggaattataaaagttaaggaaaactatacctccaagcaaatatgggctgggcatatacctaggtaccatttcgatgcgctggtcctgtttctggaaagctaaacacgcacccaatactgatgagctatacacatttactccctccgttcctaaatatttgacaccgttgattttttaaaacatgtttaaccattcgtcttattcaaaaaatttaagtaactattaattcttttcctatcatttgattcattgttaaatatacttttatgtatacatatagttttacatatttcacaaagttttttgaataagacgaatgatcatgtttaaaaaagtcaacggcgtcaaatatttagggacggagggagtatatctcattcatcgctctgttcttgtggctcttgccgattcatgcacatgttttctgaaacctgctgttatgcaggatatgggggagaccatggaaatatatgcaaccgacaacagagatagatgggagattggttaaaaatcattgtaaaatggatcggagatggtggattgcacaggtgtgtacctcatgccaagatgaatgatgagcatattttgtgctattcataatggggatgcaaatatgcttcatcaacctgaaacttccatgtaggccctgagatacctaatgaggttccagtcagagtacatgtgcagattactgaatgtggctagacattcagcatttggcatgcaggcagcaaagatggttcttgaaaatgtcccagatccaccaaaggtttgtattagcaatctgaagatttttatgttgctttgttccgtggagagttttgtctgcgcatcattcggataaagcaacattagcactaaccaccttacttttttagataagtaactgaaagatttcacaattgcagcctagcattagcagaacagaatctgacattgagcgacttgtgtggtcggagcataaaccatatatacccgggcctcttatcagtatgcatgtaaggatgggagataaagcttgtgaaatggaagtagttggctttgagaaatacatggagttggctggtcgtcttcgaaaacgttttccaagtctcaagaacatctggctttctactgaaatgcaggcaatttaactcctcaattctcatccctcgtatggtgtaaattaatttcttcatttcattggtctgtaatttaactctgctaatgctgaaatgtaggaagttatcgacgaaacaaaattatatcccaaatggaatttctatttcacaaatgtgacgcgccaagatgtcaatgtgagcatggcaatgtatgaggccagcctgggccgtgagaccagcacaaactatccccttgtcaatttcatcatggccactgaagcagatttcttcattggagccctgggatcaacctggtgctacctcatcgacggcatgcggaacaccgcaggaaaggtgatgtctggctatctgtcggtgaacaaggaccggttctggtaagcaattcagaagctgctaaaccttgttcattgtattttagctcctctgaatagatatgtttggcctaagtttgcttctgtacggcaatagggcatgtatatatgcaccatcctagcagataactttagcgtgtgaaacttctgagctaataggaaaacagtatcgttatatc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0809500, RefSeq:Os02g0809500