Os03g0149200

From RiceWiki
Revision as of 19:28, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0149200

Description

HR-like lesion-inducer family protein

Version

NM_001055506.2 GI:297600332 GeneID:4331628

Length

3481 bp

Definition

Oryza sativa Japonica Group Os03g0149200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2717980..2721460

Sequence Coding Region

2718216..2718317,2718402..2718500,2719417..2719506,2719586..2719700,2721269..2721336

Expression

GEO Profiles:Os03g0149200

Genome Context

<gbrowseImage1> name=NC_008396:2717980..2721460 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:2717980..2721460 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggttcgtctccttcgccgggagggtcctcttcgcctccgtcttcctcctctccgcctaccaggagtttagtgaatttggagctgatggtggaccggctgcaaaggcccttcggcctaagtataacgtcttcaccaaaaatatttctgcacatttgggagtagcagtgcctcatgttgagttgaagcacattgttgctgctaccattggtctgaagggtctgggaggtctcctttttatcctgagcagttcgtttggtgcttatctcctgctgatttacctcgcttttatcacacctgttgtctacgacttctacaactacgacatggagaagtccgaatttgtgcagctcttcatgaagttcacacagaatttggctctctttggggcgcttcttttcttcctgggcatgaagaactccattcccaagaggcaggccaagaagaaggctcccaagtcgaagacgaactag</cdnaseq>

Protein Sequence

<aaseq>MGFVSFAGRVLFASVFLLSAYQEFSEFGADGGPAAKALRPKYNV FTKNISAHLGVAVPHVELKHIVAATIGLKGLGGLLFILSSSFGAYLLLIYLAFITPVV YDFYNYDMEKSEFVQLFMKFTQNLALFGALLFFLGMKNSIPKRQAKKKAPKSKTN</aaseq>

Gene Sequence

<dnaseqindica>3144..3245#2961..3059#1955..2044#1761..1875#125..192#ctctccccgtctccatccccatagctgcactgcacggaggtcgccgcggctaccccatcgccaccaccaccaccaccgcatctctctcccctcgccgtcgccgtcgccgtcgccgcagcgcgagatggggttcgtctccttcgccgggagggtcctcttcgcctccgtcttcctcctctccgcctaccaggagtacgtttgtttacttgttattgcgtcgccttccatctctctctctcttctcagctccactctcccctgcggttatggctctcattgtcgtcgtgtgtggatcgctgggttcggtttggggtcggtttcggtagatctggtgtggtggccgcggaatctgaggggacttgtgggggtttggaacgtcgaactctctctctctctcaggtgcttagatctcgcggtgggcttagtggctggttggtttgtgtgatgcactgatgcctggatctggtgggggccgattcggtttctataatggaaacggggccagttttggtttctgcatgttttgatccaactttgggctgctgaattgtggcattgggatggcgatttgcagagaaataagctagagattcctggagtgaccgctgtttcgtctcattttgtttgatctggtgagcattaggtttgagttttacatatttgctgctgggcttgagcatgttttgatgcctccttgatttgtgccactccactggattttctggaagctttcggtttgaaatgaaatggcgccccattgagtgagttatattatacagtgaaatgcagttccactttgatacgaaatgatgtgactgctgctggaattagcgttgataatcacttaatttttgcacctaatttactctgctactaagatctaagacacgaaatctggaatacctttttttttaaaaaaaatcagccagttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatattgcgtagttagttcagggaaatcctggggaaaaaaatactccagatgtacctgctcttccgtacctatcaaatttgctcccagagttgtggaaagatgaggtgttggttttggaattttatagctttcctccaatcttgtggcgcactcaacggatataacagtacatggacatccgtatgtacatggaatcttcggatgtgacactgatatctcgtcttatgtaacaacaatatcctttttttttaatgaataacgggaaaccactgttttaactcgtaacgtacccgaagcttcagtcccattaagatgctcccaccaaaacagtgtgaaataatctatcaaaccatacagtaaattaaagcttatttgtaatatttatcctgaattggcaattagtgtggttccacaattttttgccgtttcacacaatgacgcgtgatgtggtttaataagtgtgcatgcatctcttgattgacttggttctttgatcttgggatgaaagggacaaatgactgaaacggtagtgatgagtttggcagtccaatatacattttaacagcaaatctgttaatgttaatgtttcaatttctcatcaaatgttcataatttacctgactagatggatggtaagtacttgataatattccatccttttgattgtgcggtactaagtactaaacatctgatcgttctgaacgtgcgttcatttgttaagttataattggttctggatgcaggtttagtgaatttggagctgatggtggaccggctgcaaaggcccttcggcctaagtataacgtcttcaccaaaaatatttctgcacatttgggagtagcagtgcctcatgttgaggtgaagatttgctgctttagccattatatactttatgtagctgtgatgctctaatcactaacttgttctgtttatccagttgaagcacattgttgctgctaccattggtctgaagggtctgggaggtctcctttttatcctgagcagttcgtttggtgcttatctcctggtatgtactcagtacttgttatgctatattacatttttctttatatttaatcttcacattctcctcggtgccaatgttcttttaacacttcacagaagattaggggctttacttgaaagtattcttgatgggaatcttgacaattatctgatgaatatgtgatttgaaacttttagtgctttggctgaaaacttagctgttccacaatccgcatgctggattgtttgattatcagtcatttaaatgtgagcaatttatttgggactggaattttcacttcagggtcatcattttttttttgctcacttatctgatgtaagctctgtgcaagtgaacatttggggcttgcatgttgtttcctcccaacttcaagcctgataaaaatttttagtgcatagtgtttgcctctgtaatctgctgatgctcttgttcgtagttcctaaaccctgtaactatggtgttcatcgtaaaggcgtaaactccacataattgaccaataaagtctagaattcatttacagaatgtgcgctactgtatttatatactcaccttccatagatgtgcccatttccttgtttcatcagtctgaatgatggattgatggagctctttctgtggttccttgtttttttccacaaatctgtttgtgctaggtgcatattgtcaaagctagaagatagttacttcttaattttctgctttcactcctatggatcctatagatcagtagaagttggtttatctttttaccctgcttatctaactaaccaccatttccagccaaccacagggctatggtgatttgtgctctactccaattctgttcattgtgaatttggaccagcttgaattgttttttcctctgcaacttcgtttgggcatggtctaatggactacttttttttcccctctgcagctgatttacctcgcttttatcacacctgttgtctacgacttctacaactacgacatggagaagtccgaatttgtgcagctcttcatgaagttcacacaggtatatacacaattttctctgttcggagatctgccaaatttaccttaccctgccaatgtgatgaaataatatgactcgttgtagaatttggctctctttggggcgcttcttttcttcctgggcatgaagaactccattcccaagaggcaggccaagaagaaggctcccaagtcgaagacgaactagggcgttttagatagccatggcctccggcggtgatgggggacagtttattttggagtacaagcttacagtaccagttgtgctgcccttagatgtatcggattcatttttgaagggcacgaccctaatgaggtgtgagtggagggttaggggactagattgtatcagtatatgtactcgcgatttgtttgttgaactaggcttccaaggattaaattacccatttgattattttgcac</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0149200, RefSeq:Os03g0149200