Os03g0278300

From RiceWiki
Revision as of 19:33, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0278300

Description

Similar to ALY protein

Version

NM_001056260.2 GI:297600720 GeneID:4332426

Length

3077 bp

Definition

Oryza sativa Japonica Group Os03g0278300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9500618..9503694

Sequence Coding Region

9501517..9501721,9502191..9502369,9502459..9502527,9503009..9503164,9503313..9503333
,9503555..9503641

Expression

GEO Profiles:Os03g0278300

Genome Context

<gbrowseImage1> name=NC_008396:9500618..9503694 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9500618..9503694 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cgccgctctcgcctccaccccccaaatcccgaatccgccgcctcttcgttcgtcgtcgagctcgctcgctcgcccaaccctagcgcggggccctaccagccgcccaaggcccctgaatcggcgtggcagcacgacatgtactcggatgtcgcggcaggcggcggcggcggcagcggcggaggcgggagggtctcggctatcgagactggcaccaagctctacatctccaatttggacttcggcgtctcgaccgaggatatcaaggagcttttctctgaattaggtgatcttaagaaatacgtaattcactatgacagaagtgggaggtctaagggaacagctgaagttgtatttgcaaggcgtggcgatgctgtcgcagcagtgaagaaatataacaatgtgcaacttgatggtaagccaatgaaaatagagattcttgggaccaatactcctacagctgcagctgctcttccagcaaataacggaggctacgttagaaatgttgctaagagtgcaccaaggggtggcccagctggactaccgcagggtagacctcgtccaagggggggtgggaggcgccgtggtggcggaggaggcagtggtggtcctggtggatccggtggtcgccgtggcaaagagcgtagccagccaaagtctgctgaagaacttgatgctgacttggagaaataccatgcagatgcgatgcagaccaactag</cdnaseq>

Protein Sequence

<aaseq>RRSRLHPPNPESAASSFVVELARSPNPSAGPYQPPKAPESAWQH DMYSDVAAGGGGGSGGGGRVSAIETGTKLYISNLDFGVSTEDIKELFSELGDLKKYVI HYDRSGRSKGTAEVVFARRGDAVAAVKKYNNVQLDGKPMKIEILGTNTPTAAAALPAN NGGYVRNVAKSAPRGGPAGLPQGRPRPRGGGRRRGGGGGSGGPGGSGGRRGKERSQPK SAEELDADLEKYHADAMQTN</aaseq>

Gene Sequence

<dnaseqindica>1974..2178#1326..1504#1168..1236#531..686#362..382#54..140#atcgcgcccgccaccgaaaagacgaaaaaaatctcccaattccccaaccctaacgccgctctcgcctccaccccccaaatcccgaatccgccgcctcttcgttcgtcgtcgagctcgctcgctcgcccaaccctagcgcgccagatctacccgcccccgagcagccgccatggcggagaccctcgacatgacgctcgacgacatcatcaagaacaacaagaaggccaacccctcgtccggccgcggccgccgcggatctgccgctggcggcggcggcggcgggggtgggggtgttggtggtggcggcggcggcggcgtggggccgacgaggcggcccttcaagaggtcggggaacagggcggggccctaccagccgcccaaggtacgaacagcaacggatcgaacgtggggctagggtttgctgcgcgccgtcggcggaggagctgggcttccgcttttcgacggcgaggcggggaaggatgtggatggatggtcgggtggttttctcactgtggtatgacgcgatccaggcccctgaatcggcgtggcagcacgacatgtactcggatgtcgcggcaggcggcggcggcggcagcggcggaggcgggagggtctcggctatcgagactggcaccaagctctacatctccaatttggacttcggcgtctcgaccgaggatatcaaggtatataataatcgcgttgagttagtcgcttctgagcaattagcgctagaggaaagcagatatttggttgcatatgtgattagcttaagctattcgccagatctagcatgaacatgtgtaaaattccagcaatattttggttttgttcatactgctagcttcgatctgatgttaaataattctggtccatcgagatctgatcttttttcctctgaaaaaaggtcttgattaatttgtgcaaagatagtgatatgctctagttagtgatttgtatgttgacccatgggttatttgaattttttaagacaattaattattgtctacttctaggatatttttttactgtcctatttcatcaaattccatgtcaatgtgatcatttaagtagatatcattagccagtagaaattgcctgaaatcttcatgtgacatgtttttcccttaagcatttttctgagttatttattttttaatgatgcaggagcttttctctgaattaggtgatcttaagaaatacgtaattcactatgacagaagtgggaggtctaaggtacagattcaatcttacacttctttacatgcatttgtttttttttttgttttttatgtgatagcctgacttttgtctatcccttccagggaacagctgaagttgtatttgcaaggcgtggcgatgctgtcgcagcagtgaagaaatataacaatgtgcaacttgatggtaagccaatgaaaatagagattcttgggaccaatactcctacagctgcagctgctcttccagcaaataacggaggctacgttagaaatgttgctaagaggtatgttcggattgctacattatcctttatttgtttgtatgctaaagttttgcatgattgctcatcactgctgtgatgtattttgattgtgagggctgatgctaaaatactactgagtattttctataatttgatatctgtgctccacaaaataacacttgcatgatttttcatttcatttcatcatcttcagaaaattcttgcacatgaattttttattcaagtcaaacatggtgactgattatatacattggttgtttgtgatgctttctgttaattgtttataattgcacttgttgctaaaagcctaaaattgtatctatgtatcagagatgttgatatctcattatcgattgatttgtttttttgcttttcaaaacgttcttgttattttgtgtgcacttctgatcattctccagttcatataagatcttgccaacttacctttattgtttttgaaatgttacagtgcaccaaggggtggcccagctggactaccgcagggtagacctcgtccaagggggggtgggaggcgccgtggtggcggaggaggcagtggtggtcctggtggatccggtggtcgccgtggcaaagagcgtagccagccaaagtctgctgaagaacttgatgctgacttggagaaataccatgcagatgcgatgcagaccaactagatcttcacggtgttgatatttcaacatgaaatctgaaggatgtttatctgcttgttcctgctatttgtgctaccatgttcagtggcaacaacaaaacctttgtttgtcgggtcttggtttactgaattgtacggttttatgtgtctacatagaactagagttaagtggatgctggtgaacactgttatgaatattacttggttgccacttatgttcctttttctgcggagtgaaggcctgctcgagttgctccacatacagaagttactgaagatgtatgaggtgctcgtatcttctgactcctttaacatacatcatcttcaacggcattgttgcatggttatttggacattgttcctctctgtacaagggttataaggctcagccatcctcaatgaggtatgcatcatctcttatctgtttatctatatttactactgtttattggtctttttatttatttgcttctgtttcatgtgtttaaaggttcttttattctcatcttgcaggtggctggtgctttttttgttatttatcattctgctattgttgattttgggcttagcaatattcttctacccgttagtgattcatatgacagcggctggaggggtcactttcattttaaagttgatttcctccttgcaaaatctgcaccgtcatatgattattctatcttctagccagctgatcgtcagtttgaagaagcatcgaggtgcaaattctgatttaaaatttgctattgatatttgatagttattcaagtcttaacagcatatgtaggctttggacttcatttcttggccctccatccattgccttcttattctgtgtgatgttagcattgcagtggatcttcattttcattaaaaatagccatcaaactcctttagtatccc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0278300, RefSeq:Os03g0278300