Os03g0314200

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Annotated Information

Function

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Expression

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Structured Information

Gene Name	Os03g0314200
Description	Cas1p-like family protein
Version	NM_001056467.1 GI:115452662 GeneID:4332646
Length	5219 bp
Definition	Oryza sativa Japonica Group Os03g0314200, complete gene.
Source	Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome	Chromosome 3
Location	Chromosome 3:11292925..11298143
Sequence Coding Region	11293315..11293473,11293552..11293648,11293749..11293805,11293911..11293973,11294066..11294154 ,11294238..11294324,11294595..11294710,11294801..11295056,11295136..11295285 ,11295723..11295881,11296081..11296153,11296231..11296287,11296382..11296516 ,11296747..11296838,11297960..11298028
Expression	GEO Profiles:Os03g0314200
Genome Context	<gbrowseImage1> name=NC_008396:11292925..11298143 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>
Gene Structure	<gbrowseImage2> name=NC_008396:11292925..11298143 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>
Coding Sequence	<cdnaseq>atggcggaggcgatcgcgtccgcgggtgggatcgccatggccgcctcgacctccctcacgccgggccaggtctctgctcttctgggatttctttgggttttcaccgcctgggcatatgcggaggttctctattataggaagaatgctgcttctattaaagcacactcggatgtaaatttagcagtaatggattctagctcaaacaaaggagaggatcaagtgatgttattggaggagggtgtccaagcaccagtgcaaaagccagtttatgcttctctcacatcacaaatgttcagacttttcttgttggaccaggcacttattctagagaatcgattgacgttgagagcaatatctgagtttggaggtcatctgctttacttttacatatgtgatcgcacaaatctactgggagagtctgcgaagaattacagccgagatatgttccttttcctttactttcttcttattatcgtagcagctatgacttctttcaaggtccaccaagacaagtcgtcattcacggggaaatctatactgtatctgaataggcaccaaactgaggaatggaagggttggatgcaggtgctgtttttgatgtaccactacttcaatgctaaagagatatacaatgcaattcgtgtgttcattgctgcatatgtctggatgactggatttggtaacttctcctattattatgtgcggaaggatttcagccttgcacgatttgctcagatgatgtggcgcctcaattttttcgtggcattctgttgtattgtgctaaataatgactacaccctctattatatttgccctatgcacacactttttacccttatggtttatggtgctcttggaatactaaataagtataacgagattggatcagtgatggctataaagtttgttgcctgctttttggtggttatcctgatatgggaaatcccaggagtcttcgagattgtctggagcccattcacgtttcttctcggctatactgatccatctaaacctgatctccctcgattgcatgagtggcatttccgatctggactggatcgctacatatggattgtggggatgatttatgcttattaccatccaactgttgagaagtggatggagaagcttgaagaagctgaaacgaaaactaaactctatattaaggccttgatagtttcaattgctttaacggctggttgtttgtggtacgagtacatttataagctagacaagattacctacaacaaataccatccctatacatcctggatccccataactgtgtacatctgcttacgcaacttcactcaagaattccggtgctgctctctcacactatttgcctggctcggaaagattaccttagaaacgtacatatcacagttccatatttggctcagatcaaaagtgcccaatgggcaacctaaatggctattgacaataatcccaaattacccaatgctgaatttcatgctcacaactgctatatatgttgcagtctcccataggctatttgagttgactaacaccttgaagatcgcatttgtgcctagtcgtgacaacaagcgcctctcgtacaattttgtggcgggaattgcaatttcagtggcgctatattctttatcatttcttatagttggcgttgcaggatactag</cdnaseq>
Protein Sequence	<aaseq>MAEAIASAGGIAMAASTSLTPGQVSALLGFLWVFTAWAYAEVLY YRKNAASIKAHSDVNLAVMDSSSNKGEDQVMLLEEGVQAPVQKPVYASLTSQMFRLFL LDQALILENRLTLRAISEFGGHLLYFYICDRTNLLGESAKNYSRDMFLFLYFLLIIVA AMTSFKVHQDKSSFTGKSILYLNRHQTEEWKGWMQVLFLMYHYFNAKEIYNAIRVFIA AYVWMTGFGNFSYYYVRKDFSLARFAQMMWRLNFFVAFCCIVLNNDYTLYYICPMHTL FTLMVYGALGILNKYNEIGSVMAIKFVACFLVVILIWEIPGVFEIVWSPFTFLLGYTD PSKPDLPRLHEWHFRSGLDRYIWIVGMIYAYYHPTVEKWMEKLEEAETKTKLYIKALI VSIALTAGCLWYEYIYKLDKITYNKYHPYTSWIPITVYICLRNFTQEFRCCSLTLFAW LGKITLETYISQFHIWLRSKVPNGQPKWLLTIIPNYPMLNFMLTTAIYVAVSHRLFEL TNTLKIAFVPSRDNKRLSYNFVAGIAISVALYSLSFLIVGVAGY</aaseq>
Gene Sequence	<dnaseqindica>4671..4829#4496..4592#4339..4395#4171..4233#3990..4078#3820..3906#3434..3549#3088..3343#2859..3008#2263..2421#1991..2063#1857..1913#1628..1762#1306..1397#116..184#acctaattttcttcgtcctctccctctcttcttctcttctcttctctgctcggctcctgtacgcggctggatccgagcggcgcaggaaggaggcggggcggatgctgtagagagaatggcggaggcgatcgcgtccgcgggtgggatcgccatggccgcctcgacctccctcacgccgggccaggtgagccctaaatcgcaccgtcgatccggggaggggggggctgctgctctgttgttggtgcgggtgcggggaccgcgcggcatttgctgccccctaggcgatttcgtcgggggaatccgcggttggcgaggtggctcaaggatttcgtcggggggaatgggaaggcatcgcccgtgtgccgggcgccgggcgcggccgcggccgcggaagtgcggcttgggttttgggtttaggtggctgggactgggaggaagcgcgctggagatgatggcatgcgcgtggaatctctggcgggagcttgtgttgctttaacgctgctgttggctaaattggcgggattgggtgatgatcggtgagatggttgtggatatcggttggttgtctggtttgcttttttgttgatacgacaagtattagtgctaggttttaggattcggtggtattcggataggaggctaactattttggctgatgcgggatttgaatttgtggctggtttcagggatgtggatcaaagggtgtaaatcatcaggtcatagctgtgcttttgtatggtaggctagtagcaccaaatatatggtggaggtttcattcatccgagctgttggaaaattggcgatataatagcttatatgtagggtttaaggttggaaattcgtaagtggctgcggtttcagatctggaggtattggatgttagagtaagaccgtcattaagatctggcagcatgggctattctgttatattttctaagagatggtagcagtatcgatgtgctgaccaacctgttagaattggtgtcaatctgcttgattttctagcgcacggttgttccttactttggtagttgttaggaagttcaggttggtaaaaatactaaaactagatagtaatttagttgcagaaatacatattggtgtggattgcaagaatccggactatgatgagctacttttaccccacaagttcaaataacacaattacagtgtttgattgcaacttgaaagccgtagaactattgtctactatacagatgactgagtgatattcttctaatagtaggattttgttttgggggtcctcaatcactggatctgagatagctggcaactttctgacaggtctctgctcttctgggatttctttgggttttcaccgcctgggcatatgcggaggttctctattataggaagaatgctgcttctattaaagcgtaagtaattgtgacagctatatttacagttctggtatccatgcattttaattttcgtatatgctaagtgatatactctcatgttgccactgagattgaaatatctacttatgttacaagaagcataactcaagagtcgtacttcgtctggactgaatgtgtgctgcaccattattttgcttgaaatgtaccacttattggaatttctgtttctttatctttgttagtagacactcggatgtaaatttagcagtaatggattctagctcaaacaaaggagaggatcaagtgatgttattggaggagggtgtccaagcaccagtgcaaaagccagtttatgcttctctcacatcacaaatgttcaggttgtttgtgatgtatgatttctccttcatgttgtatataaacgttgagatatcaacattactaaggcactgacaaagataatctgttgcacagacttttcttgttggaccaggcacttattctagagaatcgattgacgttgagagcaatgtaagctacagctgcatcttgcattcacgtgttcttctatgttgcattatttggctgagcagttattattttttcagatctgagtttggaggtcatctgctttacttttacatatgtgatcgcacaaatctactgggagagtctgcgaaggtgctattacattgatgtttattacaagcctgatttcacgtttgaaaagtagttgcaaaaatattgtatctagttgagatatcttttacgaatacattctaagccttactaatatttcatggaaagtgcctatataatgtgctgttctttcaatgggacattttttgttctgaccttttctgttatcctgtatctgcagaattacagccgagatatgttccttttcctttactttcttcttattatcgtagcagctatgacttctttcaaggtccaccaagacaagtcgtcattcacggggaaatctatactgtatctgaataggcaccaaactgaggaatggaagggttggatgcaggtatcttttttggggaaaaaaaactccgtcttccttttcatatatttatggggtatcttatactagttggcttctgtttgtgcataacactaatttatcataagtcagaactatgcaaagagggtataaatgcattcagtattaaacatcttttgtcatattgttggtttccgtttgtgcataatactaatttatcagaactcagaactcagaactatgcaaagaggatataaatgtgttcattattaaacatcttttgtcatattgttctacatgtatgcttacctagtcttcattaatgaacctctcttagttttagtaagttaattagtcaatgctcaatgcctcaatagcatacatgtgtggttagtaagtttttcatctatgttcaagtgcatgcatatcacttgttttcagcattgatttccctcattcaggtgctgtttttgatgtaccactacttcaatgctaaagagatatacaatgcaattcgtgtgttcattgctgcatatgtctggatgactggatttggtaacttctcctattattatgtgcggaaggatttcagccttgcacgatttgctcaggttcattcttagacccttcattccccttcattctttcttccataagtaggaccttcctgacatgttttcaccttgacagatgatgtggcgcctcaattttttcgtggcattctgttgtattgtgctaaataatgactacaccctctattatatttgccctatgcacacactttttacccttatggtttatggtgctcttggaatactaaataagtataacgagattggatcagtgatggctataaagtttgttgcctgctttttggtggttatcctgatatgggaaatcccaggagtcttcgagattgtctggagcccattcacgtttcttctcggtaagttttctctgtaaacttttagtgagtttgatagtttatatatatatttttagtaaggatgatcaatgtaatttaccttgtgtgcaggctatactgatccatctaaacctgatctccctcgattgcatgagtggcatttccgatctggactggatcgctacatatggattgtggggatgatttatgcttattaccatccaactgtatgtttcctgccaactgtgctatacttttacatagtgttcagttatagatgttctatttctttagttttatcaaatttcataaatcgcataaaagttgtttgtatgagtgcatgtctctgcgcgcctgcgcatatgcatgtgtgagagaaatgtgctgatataaattttctggttctttcagttttgagggtgttgagtcatttgtaaaattgtgggcatacgagagaatagtattttacatcaataaatcatttgtttgtgttgcaggttgagaagtggatggagaagcttgaagaagctgaaacgaaaactaaactctatattaaggccttgatagtttcaattgctttaacggtaattatcaaataactgaataagccacttattgttgcatatccatcttttggtaagaccaccttgctttactgtgatcacaggctggttgtttgtggtacgagtacatttataagctagacaagattacctacaacaaataccatccctatacatcctggatccccataacgtatgtattttttccatatcgattttttttataaaaaaaaatccttggtgtactgcaataactgattgctcaatgcttattgtactcaaaagtgtgtacatctgcttacgcaacttcactcaagaattccggtgctgctctctcacactatttgcgtaagttttgtgtttgtgaagcatgttccacttttatgttggactttatcttactgtaatgcgatattgtgaatatgcaattaatgtactcttcatctgtgctagctggctcggaaagattaccttagaaacgtacatatcacagttccatatttggctcaggtaaccagctgctgtctctacaatattacctccgtggttcgtgccactagaagttcctcttgttcttgtcaatgactgaaaattgtctttactcctgcagatcaaaagtgcccaatgggcaacctaaatggctattgacaataatcccaaattacccaatgctgaatttcatgctcacaactgctatatatgttgcagtaagtagatcttccctgtgactttgaagagtttagaccttacaggcaacctgcttatgttataacttattcctacaggtctcccataggctatttgagttgactaacaccttgaagatcgcatttgtgcctagtcgtgacaacaagcgcctctcgtacaattttgtggcgggaattgcaatttcagtggcgctatattctttatcatttcttatagttggcgttgcaggatactagcaagtcctatagttggccttatgtggcatctgcaaagctgatttgattaccttcacggcttggagacttccattgtttcaccctgagcttcgttttttatgagtgttacatggtgaaaaggagtcgggatgcagaacaaaaaatgatcagggagagtgtaacatgtagcattaaaccccaaatgggaatataatgaagtagatatatgcctgtatagccgttgaaaattgaaatgcatatgtaagcgagctcgttggctatagaaacttctctctcttggcctcttggcccgttgagattgagatttgaaataggatagtggaaacatgtaagaatattattcttttgacccttctcgaaataacgttgttagcttggtgcaagctgggt</dnaseqindica>
External Link(s)	NCBI Gene:Os03g0314200, RefSeq:Os03g0314200