Os03g0325500

From RiceWiki
Revision as of 19:34, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0325500

Description

Similar to Phosphate starvation regulator protein (Regulatory protein of P- starvation acclimation response Psr1)

Version

NM_001056519.1 GI:115452766 GeneID:4332704

Length

2248 bp

Definition

Oryza sativa Japonica Group Os03g0325500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11889633..11891880

Sequence Coding Region

11889910..11890123,11890200..11890276,11890400..11890457,11890528..11890615,11890685..11890754
,11890946..11891503

Expression

GEO Profiles:Os03g0325500

Genome Context

<gbrowseImage1> name=NC_008396:11889633..11891880 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:11889633..11891880 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtatcatcatcaacaacagctccaaagccacaaccaactcttgccatctaggcagagtttcccttcagaacggcacttgcttatgcaaggaggaagtgtttcaggggaatcagggcttgttctctcaactgatgcaaagcctaggttaaaatggacccctgagctacatgagcgatttgtggaggcagtaaatcaacttggtggtccagaaaaagctaccccaaaaacaatcatgaggctcatgggcgtccctggattaacactgtatcatctcaagagtcatcttcagaaatacagactaagcaaaaatctccacgctcaagccaatgcgggaaatgtgaaaaatgcgctagtttgcaccacagcaacagagaaaccatctgaagcaaatggatcaccagttagtcacctaaacctgggaacccagacaaacaaatctgtgcacataggtgaagcccttcaaatgcaaattgaagttcagagacggctacatgagcaactagaggtacagagacacctgcaactccgaattgaagcacaaggaaagtatctacaatcggtgctggaaaaggcacaggagacacttgcaaagcagaatgcaggttcggttggtcttgaaactgcaaagatggaactgtcagaattggtctccaaagtatcaaccgaatgcctccagcatgctttttcaggctttgagattgaaagttcacaaatgctacaagggcacaccatgcatctcggtgatggatcggttgacagctgtttaactgcatgtgatggttcccagaaggatcaagatatcctatcaattagcctttcagcccaaaaaggaaaagagattggttgcatgtcatttgatatgcatgtgaaagaaagaggaagtgaggatttgtttctcgacaagctaaacagaaggccttcaaatcatccagaaaggtgtgagaggagaggtggctttagtatgtcatgccagacagcaaacttggatctgaacatgaacgacacttatgacgggcctaaacactgcaagaaatttgatttaaacgggttcagctgggcctag</cdnaseq>

Protein Sequence

<aaseq>MYHHQQQLQSHNQLLPSRQSFPSERHLLMQGGSVSGESGLVLST DAKPRLKWTPELHERFVEAVNQLGGPEKATPKTIMRLMGVPGLTLYHLKSHLQKYRLS KNLHAQANAGNVKNALVCTTATEKPSEANGSPVSHLNLGTQTNKSVHIGEALQMQIEV QRRLHEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLAKQNAGSVGLETAKMELSELVS KVSTECLQHAFSGFEIESSQMLQGHTMHLGDGSVDSCLTACDGSQKDQDILSISLSAQ KGKEIGCMSFDMHVKERGSEDLFLDKLNRRPSNHPERCERRGGFSMSCQTANLDLNMN DTYDGPKHCKKFDLNGFSWA</aaseq>

Gene Sequence

<dnaseqindica>278..491#568..644#768..825#896..983#1053..1122#1314..1871#atagttagttagagcagctaaaggccatctgactcccaaagaatagaactgcaacgtaccatgaactacccctgattaccagaaacagagggctgataaaacatcaccaggcggttcctcacaggggggttgtgcagtctacaagcaaattgtacataagaggaattgaaagaggtatgagttatgtgtttatgtgttgcaagtaagtttggtttgttcaaacatagaaaaagagatatcttgtcatagatcctaacatgagatatattcttgccagatgtatcatcatcaacaacagctccaaagccacaaccaactcttgccatctaggcagagtttcccttcagaacggcacttgcttatgcaaggaggaagtgtttcaggggaatcagggcttgttctctcaactgatgcaaagcctaggttaaaatggacccctgagctacatgagcgatttgtggaggcagtaaatcaacttggtggtccagaaagtgagcattcgattaaacctttctgccataagagcaagcacataaaaatcatcatctaaacacttcaatcttgcagaagctaccccaaaaacaatcatgaggctcatgggcgtccctggattaacactgtatcatctcaagagtcatcttcaggtatacatggaacttagtatcacagttctttcatctctttgttttaatgggacaccactcggtttcttttcattttacatgccttcaagcaatatattgatttttttttctcttttgcactagaaatacagactaagcaaaaatctccacgctcaagccaatgcgggaaatgtgaaaaatggtaaatttcagttctcaaatgatcagcttaccataaagctcaatactgaacttcctttccattttgtcagcgctagtttgcaccacagcaacagagaaaccatctgaagcaaatggatcaccagttagtcacctaaacctgggaacccagacaaacaagtaagagacaagtgtacttttgctcaagcgcgttcgcagaaggttaacacccttttgtatttctatcagatctgtgcacataggtgaagcccttcaaatgcaaattgaagttcagagacggctacatgagcaactagaggtacaaaaacagcacgagtttataacataaatttatatttattgtaataaacacttttgacatccctttgaattcattgaaatattacattttggttgaaaaattaatgcaaagaggcgcacataatataggttggattttatgattaaatatccaataaatacaaagagctaacaatggcttttgaacaggtacagagacacctgcaactccgaattgaagcacaaggaaagtatctacaatcggtgctggaaaaggcacaggagacacttgcaaagcagaatgcaggttcggttggtcttgaaactgcaaagatggaactgtcagaattggtctccaaagtatcaaccgaatgcctccagcatgctttttcaggctttgagattgaaagttcacaaatgctacaagggcacaccatgcatctcggtgatggatcggttgacagctgtttaactgcatgtgatggttcccagaaggatcaagatatcctatcaattagcctttcagcccaaaaaggaaaagagattggttgcatgtcatttgatatgcatgtgaaagaaagaggaagtgaggatttgtttctcgacaagctaaacagaaggccttcaaatcatccagaaaggtgtgagaggagaggtggctttagtatgtcatgccagacagcaaacttggatctgaacatgaacgacacttatgacgggcctaaacactgcaagaaatttgatttaaacgggttcagctgggcctaggaaatgagcactaacaattgccatgtcctttagcactatcagtgagaacaagtgaaaacagattttttcttccgatgatcaatggtattgccatgccttcgattgaaagatcaacgccacttcacaatttgaccatctctgctgttataaaatggtaattcactgaaataagtgatggaattagcgataagatgcttcttgtgcaccacacaagttaccaatttggccatgtagatcccattcccggagtcggtagcatttgagaacttggcactctccattattctgccttaccgtgattgtagtttgtaccatagaaatataacaaattttgttaaaaattccatttgagctaatgattactagttactactgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0325500, RefSeq:Os03g0325500