Os03g0370000

From RiceWiki
Revision as of 19:36, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0370000

Description

Similar to Pyruvate dehydrogenase kinase isoform 1 (EC 2.7.1.99)

Version

NM_001056731.1 GI:115453190 GeneID:4332932

Length

4153 bp

Definition

Oryza sativa Japonica Group Os03g0370000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15077311..15081463

Sequence Coding Region

15077484..15077726,15078696..15078957,15079470..15079650,15079978..15080125,15080673..15080877
,15081141..15081199

Expression

GEO Profiles:Os03g0370000

Genome Context

<gbrowseImage1> name=NC_008396:15077311..15081463 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:15077311..15081463 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggcgtactcggagccggcggcgagggcggtggcggaggaggtggcgcggtggggagggatgaggcagacgggggtgacgctgcggtacatgatggagttcggggcgcgccccacggagaggaacctgctgcggtcggcgcagttcctgcgcagggagctccccatccgcatcgcccgccgcgcgctcgacctcgactccctccccttcggcctctccaccaagcccgccatcctcaaggtgagagattggtatttggactcattccgcgacttacggtgcttcccggaggtgaggaaccgggatgatgagcttgcattcaccgagatgatcaagatgattcgagtgcggcacaacaatgtggtgcccaccatggcgttgggtgtgcggcagctgaagaaagacctgggtggcacaaaggcctttccccctggcattgatgagatccatcagttcctcgaccgcttctacatgtcaaggattgggatccgcatgctgatagggcagcatgttgctttgcatgagcctgatccagaacctggtgttattggactcataagcaaaagattatcccccatgctggtggctcaacatgctactgaagatgcacgtgctatttgcatgagggaatatggatcagcccctgatgtgaacatatatggagacccagatttcacatttccatatgttaaactacatctacaactgatgatgtttgaattggtgaagaattccctccgtgcagtacaggaacgatatatgaactctgataagcatgcgcctcctgttagaatcatagtcgctgatggagcagaggacgtaacaatcaagattagtgatgaaggtggtggaatacccagaagtggtctctcgagaattttcacatatctctacagcacagcagaaaacccacctgatctggatggccgtaacgaaggagtgaccatggccgggtacggctatgggatcccgattagccgtctttatgctcgatattttggcggggacctgcagatcatttctatggaaggatatggaaccgatgcttacctccacctatcacggctaggagattcggaggagcccttgcattag</cdnaseq>

Protein Sequence

<aaseq>MMAYSEPAARAVAEEVARWGGMRQTGVTLRYMMEFGARPTERNL LRSAQFLRRELPIRIARRALDLDSLPFGLSTKPAILKVRDWYLDSFRDLRCFPEVRNR DDELAFTEMIKMIRVRHNNVVPTMALGVRQLKKDLGGTKAFPPGIDEIHQFLDRFYMS RIGIRMLIGQHVALHEPDPEPGVIGLISKRLSPMLVAQHATEDARAICMREYGSAPDV NIYGDPDFTFPYVKLHLQLMMFELVKNSLRAVQERYMNSDKHAPPVRIIVADGAEDVT IKISDEGGGIPRSGLSRIFTYLYSTAENPPDLDGRNEGVTMAGYGYGIPISRLYARYF GGDLQIISMEGYGTDAYLHLSRLGDSEEPLH</aaseq>

Gene Sequence

<dnaseqindica>174..416#1386..1647#2160..2340#2668..2815#3363..3567#3831..3889#gcttcttccacgcgctcacgcggctcccgttttcgcggctgcgttttctcgctttcgccgcagctcctcccttcgtcgtccgtacgacgccggccggccgatgcgccgccggtccaggggcgccgcggggtggtgctgttgtcggtagggagggagtgggggtgggtggggggatgatggcgtactcggagccggcggcgagggcggtggcggaggaggtggcgcggtggggagggatgaggcagacgggggtgacgctgcggtacatgatggagttcggggcgcgccccacggagaggaacctgctgcggtcggcgcagttcctgcgcagggagctccccatccgcatcgcccgccgcgcgctcgacctcgactccctccccttcggcctctccaccaagcccgccatcctcaaggtgaccacccccctcctctcttttctttccccaccagagaggatgagaggaggatgaggagtgctccaccgctttgcgtttctctctagatttgggccaaccagtgcctcgacttttcgggaagattttttttttttgctctccttttggagaaatccgatttgggactgggattttctatgaagttcttttttttcccatttgctaaaagtagtagtactagctttctagtaggagtattggttaatctactgggatgtttatttgcgaccatttttaaaaataaaaactgttctgttaggatttagtgatatgttcttccaactcgattgttaaaattttaataaattatcaccccgctccattcctctttttggtgagttttttttggaggaggaacgggagagatggccagtgttgagacggcctcatttgttggggaataacaaattaaattggtccttctaaattatagtagtatctgttttttttacggaaaaccaaattttatctgttgtgttgctttcgtttaattacgcagatttttgtgagtggtgaccgtcaattctcgactaacactgtagagtagtttaaatgtcacactctttcatatcattcgcttgaaataacatcaccgaaatcttcttgttcaatcccagccagcttttcaaattttgctaaattttccatttgtttggtcgtttcagttcttcggaagtagtgtagcacagctgtgttttaggactagaggaatttgttaggttccttctcgccaacttgcttaaatcgctagtgtctttttttaaaagacgcattgactcctcgaaattatcagctcggccaatctaaaggccctgaacttgtcaaattgtaaattttctaggaggatttgcaaagttgagtcattatgttcttgccagggaaagatccatttgcaggactaacttttggtctttctccactgtgaaggtgagagattggtatttggactcattccgcgacttacggtgcttcccggaggtgaggaaccgggatgatgagcttgcattcaccgagatgatcaagatgattcgagtgcggcacaacaatgtggtgcccaccatggcgttgggtgtgcggcagctgaagaaagacctgggtggcacaaaggcctttccccctggcattgatgagatccatcagttcctcgaccgcttctacatgtcaaggattgggatccgcatgctgataggttagcagattccgcatgaagtatttattaaatgatgatggaaatggaatctatctactaatataatggccttacttttaggccattgatattccttggcccttgcctgctggataaaactggctaaaagccttgtcagcacttaacaatctggaaaatatagtttttctttgcacatgaatattttatttattttggtataacatgttggctatattagagcagcaatagctgtaatgtccaatcaggatgtctttttcctcagaatgtggtgattagaggatactcaatcatatcgttctagcttcttgtccagaaactaaagttaccacagagcagctatcaaccatttacggttacatgtcaataagaataatccttttttactttatttatgaatggaagaaattgtttttctttttttgatgtgaaagtgatgctaacataacaaataagtgacaattgctactgcacttttttttactgagttgtactaacttgcttgatttcagggcagcatgttgctttgcatgagcctgatccagaacctggtgttattggactcataagcaaaagattatcccccatgctggtggctcaacatgctactgaagatgcacgtgctatttgcatgagggaatatggatcagcccctgatgtgaacatatatggagacccagatttcacatttccgtaaatccctgatttaaatacttgctacatgtttttgtttaatttgatttaatagcacttcattgttagttcttctttgctattagaaatatttgttggccacctagtttctgttgtcatttaaatcttccatgacttctacgcaattgtcaactaagctgctctgcttactagtccatgcacaaatcacattttttggccttatttctgtttgtcagaaaccactctagctgaacaacctctatactgaattttaatcagaatatggctgaaggacaggaagtattaaaacagttgtcctgaactgctttgccttcttgatttcagatatgttaaactacatctacaactgatgatgtttgaattggtgaagaattccctccgtgcagtacaggaacgatatatgaactctgataagcatgcgcctcctgttagaatcatagtcgctgatggagcagaggacgtaacaatcaaggtatgactccttccccaagaattatgctgactttgaagtgttttctggactcaaatcatgctagcagatatcagttttcgcaatttttattgatgtgtaaacaatacacagtagtgattagaaattctgagctatttttaaatatggttttgagtttatttaaatagtatggtggtcactttggtcttgcagtttctgtttaaagaaagactggtgttgcaatagcatagcaagttctgctgcattttctaaagtgatcgttattctgtgctgatagtaataaggtcattactgttacagaaaattgggtcagtttttatgtgaaagcatcacccatttctccctttatttttcatgttcttctctctttcctagtttctccgcgtatgatagctttgttgtgactttttatatagatagttcttatgtatatgagattacaaaaagatattacgggtttatctatctttgatagtttaattatttgcagttacccaatgtatttattataggtacgcctatttcagttagaacctttttggtgcagattagtgatgaaggtggtggaatacccagaagtggtctctcgagaattttcacatatctctacagcacagcagaaaacccacctgatctggatggccgtaacgaaggagtgaccatggccgggtacggctatgggatcccgattagccgtctttatgctcgatattttggcggggacctgcagatcatttctatggaaggatatggtatgtccacagttcactttctatgtcctgtgaattgaagctcttcttttttatatggtaaagaagagtaatggccaaaagcccaaaacccttgggatttggaggctttcatctaccatgcgttctctctctataatcttcataaactgctgtgagaacttaccactcatgaaacatgatgcagatgttatactatcatcataattttgcataaacaagacagtttcatcatctaattgactgtcattacctcttttgtgtaggaaccgatgcttacctccacctatcacggctaggagattcggaggagcccttgcattaggagatctggaggaggaaaccctttgcctcagttctgataccactgctgtaattaggatgctattgcttttaccattgctgtgctggtatgcaaatacatagttcccaaggccagccagctctatgtgcttccagtttgctggagcgtgatcataattcagatttcagaatcccctctggttcacattgccattagaactcgttatccctcgccctcggtggctgcctgaaaaatgtgatgtacagttgtccgttttcggagttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0370000, RefSeq:Os03g0370000