Os03g0617500

From RiceWiki
Revision as of 19:39, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0617500

Description

Cyclin-like domain containing protein

Version

NM_001057200.1 GI:115454128 GeneID:4333455

Length

2496 bp

Definition

Oryza sativa Japonica Group Os03g0617500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:24170420..24172915

Sequence Coding Region

24171266..24171487,24171576..24171709,24171800..24172106,24172207..24172293,24172390..24172452
,24172635..24172742

Expression

GEO Profiles:Os03g0617500

Genome Context

<gbrowseImage1> name=NC_008396:24170420..24172915 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:24170420..24172915 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tggaggcagaggacgagtactcggccgggtgctccttctccctcatgtgccaggaggatagcaccgacctcgacgacgacggcggcggcggtggctgcttcgccggcggcggcggcgccgatggactggttcgcactcgcgcggcgcgccaccgtgaagtggatcctcgagacgcgagggtgcttcggattctgccaccgcacggcgtacctggccatcgcctacttcgaccgtttctgcctccggcgatgcatcgacaggtcggtgatgccgtgggcggcgcggctgctggcggtggcgtgcgtgtcgctggcggcgaagatggaggagtaccgggcgccggcgctgtcggagttccgcgccggcgtcggcgacgacggctacgagttcagctgcgtctgcatccgccgcatggagctgctcgtgctctccacgctcgactggcgcatggccgccgtcacgccgttcgactacctcccctgcctctcctccaggctccggcgacacgtcggcggcggcggcggcgcgggcgcgtccgccgccctcatcttctccgccgccgaagcggcgagcgtgctcgaccaccggccgtccacggtggccgccgccgcggtgctcgcggcgacacacggcgcgctgacgagggaggcattggagtccaagatgagcggcctctccccatctttcctcctcgacaaggaggacgtgttcgcgtgctacagcgcgatgctgagccagccaacttcaccggcgagcaagtcgacgacgacgacgaccggcaagagatcgtcgtcgtcgtcgtgctccgagtccaccgacgccgcgagttcatacgacgccaccgccgcctccttcccggcggcggcgagctgtggcagcaagaggatgaggctggagctgccgggaggcatcctccgatga</cdnaseq>

Protein Sequence

<aaseq>WRQRTSTRPGAPSPSCARRIAPTSTTTAAAVAASPAAAAPMDWF ALARRATVKWILETRGCFGFCHRTAYLAIAYFDRFCLRRCIDRSVMPWAARLLAVACV SLAAKMEEYRAPALSEFRAGVGDDGYEFSCVCIRRMELLVLSTLDWRMAAVTPFDYLP CLSSRLRRHVGGGGGAGASAALIFSAAEAASVLDHRPSTVAAAAVLAATHGALTREAL ESKMSGLSPSFLLDKEDVFACYSAMLSQPTSPASKSTTTTTGKRSSSSSCSESTDAAS SYDATAASFPAAASCGSKRMRLELPGGILR</aaseq>

Gene Sequence

<dnaseqindica>1429..1650#1207..1340#810..1116#623..709#464..526#174..281#attgccaccacctcgctctctccttccttctccgaccatccgctcccactccggcggccggagtccggccgggagaggtcgcactcatggctgtctagccggtgagccgctcatcggcggtcgtacgtcatcgctagctaagtagctagggggtcgaacggttgtgggtttgatggaggcagaggacgagtactcggccgggtgctccttctccctcatgtgccaggaggatagcaccgacctcgacgacgacggcggcggcggtggctgcttcgccggcgacggccgcgccgacctgctcctggtttacaatgccgccgccgccgccgacgacgaggatgaggaggaggtggaggagtacatggaccatctcgtgtccaaggagagcagcttctgctcctcttcttcttctacgtcgtcgtcgtcgtgctgcttctccgacgccggcggcgagtcggcggcggcggcggcgccgatggactggttcgcactcgcgcggcgcgccaccgtgaagtggatcctcgaggtgaatgatcgttttctccggtttgggtttttcttgatggaacagagcatctctgacctgacatctcgccgccgccgccgccgccgccatttgcagacgcgagggtgcttcggattctgccaccgcacggcgtacctggccatcgcctacttcgaccgtttctgcctccggcgatgcatcgacgtgggttgatctcgctggtcaacggttgctagctatagcttctttcccctgtttcttggatggcttccattgatgggtcatgggtgtgggtggggtgcagaggtcggtgatgccgtgggcggcgcggctgctggcggtggcgtgcgtgtcgctggcggcgaagatggaggagtaccgggcgccggcgctgtcggagttccgcgccggcgtcggcgacgacggctacgagttcagctgcgtctgcatccgccgcatggagctgctcgtgctctccacgctcgactggcgcatggccgccgtcacgccgttcgactacctcccctgcctctcctccaggctccggcgacacgtcggcggcggcggcggcgcgggcgcgtccgccgccctcatcttctccgccgccgaaggtatgacacccacatcgatcgatcgatcgatccattgatgcgttcgaggaggaaccaatccgtgtgctctgtttttttttttggttgcagcggcgagcgtgctcgaccaccggccgtccacggtggccgccgccgcggtgctcgcggcgacacacggcgcgctgacgagggaggcattggagtccaagatgagcggcctctccccatctttcctcctcgacaaggtcggtcgccgtcgaacacctgcatgctcatgctcatctccatggattattaacaaaatctcccttgttttggtgttcgatcgatcaggaggacgtgttcgcgtgctacagcgcgatgctgagccagccaacttcaccggcgagcaagtcgacgacgacgacgaccggcaagagatcgtcgtcgtcgtcgtgctccgagtccaccgacgccgcgagttcatacgacgccaccgccgcctccttcccggcggcggcgagctgtggcagcaagaggatgaggctggagctgccgggaggcatcctccgatgagcggcggcggcggccgggacacgcatggtttttgtccgtcgtctcgagcacgtcatcaccatttctcttccaatttccttacaaatttttttcacttctttgatcgatgcaacagcatttgccaaacaatttgttcttggcagtgcgctcgctgatcgatcccggattggattggcttggttaaattaatcccagcagcacgcgagatcgagaggatcaaacaaacaaaaacaccaaaaaaaacacaaaggatatcaagatcgatggagcttgatcgagcttctcctaaggagaggagaaaactcaaactgctcgtgtgagacagtgacagagtgagtgagagtgagagtgtatcactgtacacaaggatggaagaaaaaaaaaacactttagcctgcacattgcactcacactgcacttcccgggaaggagtcaagaagaagagagagaagctgaagaacagtgctactaggaacagtagctgcagataaaaacgatgggagtaatgtctaatccgtctgccagttcaatgcaagcgaaggagagagcaaagaaagctgttgctgcagcagctgcaagtaccatggtccatggccttaactctgatttgatcaaaagccttctcctgctcaaagtgagtgtgtgtgtgtgtgcgcgcgcatgttgctactatggcggcgccggtgcatggctgccaaatgcatgtggctgctacactggttgcctgtaacctgtagtagtgagctactgccattgttgtagcctttgcaactttgcattgtattttcttgagtgtgtgtgagagagatggataattcagacagagtttgtagggttcttggttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0617500, RefSeq:Os03g0617500