Os03g0644000
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os03g0644000 |
|---|---|
| Description |
Autophagy protein Apg6 family protein |
| Version |
NM_001057291.1 GI:115454310 GeneID:4333557 |
| Length |
5698 bp |
| Definition |
Oryza sativa Japonica Group Os03g0644000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:25595907..25601604 |
| Sequence Coding Region |
25596316..25596472,25596683..25597035,25597261..25597431,25597773..25597897,25598402..25598450 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:25595907..25601604 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:25595907..25601604 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaagccccctgcatcctccgccgccgctgccggcgacaagggcggcggggtcgacccgtctctgccgcggttcaagtgccaggagtgccaacgcgcgctcgtcgtcgtcggcgtcgagtccttcaccgataagctccccgctcatgccgtctccggtatgaacgtgtcctctgttcagggcagcgttatgggtgctagcaggatggacaactcttatgtcgtgctatcgaagcaaaatagatcacatagccatggaattcccccacgcccgccaagcgcagggatcccgcgtgccgagccgaaccaaccaacaagagcaatggagggatcatatatagtgcttccacctgctgccgcttccatatacaagacatctgcctctgaaggaggtggtgcgcagttgtcaccaacaagtatgaaccccggtagccctttaccaggaaataattttcactctagcgtgactgtattaaaacgggcatttgagattgctacatcacaaacacagattgaacagccactctgtctggactgtatgaggttgctgtctgataaaatggagaaggaaattgaagatgttaatactgacaataaagcttatgaggcctgtcttcaacgtctggagcaggaaacctataacatcctcagtgaaactgactttcagaaggagagacaaaagattgaggaagaagaaaagaaacttaaagctgcaattgaggaagctgaaaagcaatattcagaaatttgttccgagatgaagtgccttgaaacaaaatctaaacagttcgaagaactggaagaaaggtattgccatgatctcaatagctttcagtttcagtggatatctcaccaggaagaaagagatgcggttttggccaagatagaagtttcgcaggttcatctagaattgttaaagcgtacaaatgttctcaatgatgcattctatatttcacatgatggggtgatcggaacaataaacaactttcgtcttggccgccttcctaatgtacaggtggagtgggatgagataaatgctgcttggggccaggctgctcttctgttgcataccatggctcagtacttcttcccaaaatttgaataccggatcaaaattcaccctatgggaagctatccaaaagttacagacatcaaccaaaatacatatgaactgttcggtcctgtgaatttattctggagtacccgatttgacaaagccatgacatggtttctgacttgcttgcaagaatttgctgattttgctgttagtttggataaagagaacaatgtaccacctgacaagtcattgaagctcccatataagattgaaggtgacaaagtagggagctatacaatcttcttaagtttcaataaacttgacaattggacaaaagcactaaaatacatgctgtgcaacttgaagtgggttctctactggtttatcggcaatacaagttttgccccaccctctggatctttacacgtagcacagtcttccaagggatga</cdnaseq> |
| Protein Sequence |
<aaseq>MKPPASSAAAAGDKGGGVDPSLPRFKCQECQRALVVVGVESFTD KLPAHAVSGMNVSSVQGSVMGASRMDNSYVVLSKQNRSHSHGIPPRPPSAGIPRAEPN QPTRAMEGSYIVLPPAAASIYKTSASEGGGAQLSPTSMNPGSPLPGNNFHSSVTVLKR AFEIATSQTQIEQPLCLDCMRLLSDKMEKEIEDVNTDNKAYEACLQRLEQETYNILSE TDFQKERQKIEEEEKKLKAAIEEAEKQYSEICSEMKCLETKSKQFEELEERYCHDLNS FQFQWISHQEERDAVLAKIEVSQVHLELLKRTNVLNDAFYISHDGVIGTINNFRLGRL PNVQVEWDEINAAWGQAALLLHTMAQYFFPKFEYRIKIHPMGSYPKVTDINQNTYELF GPVNLFWSTRFDKAMTWFLTCLQEFADFAVSLDKENNVPPDKSLKLPYKIEGDKVGSY TIFLSFNKLDNWTKALKYMLCNLKWVLYWFIGNTSFAPPSGSLHVAQSSKG</aaseq> |
| Gene Sequence |
<dnaseqindica>410..566#777..1129#1355..1525#1867..1991#2496..2544#3226..3384#3522..3607#4052..4123#4581..4730#5012..5195#acacgcacgctacctctctctctctcgactcccgagcaggcgactcctccctccccggcgattccgccgctccgaccgccgtctctccgcgccgcgcacgtgagccccccgtcgccttcctcgcacggactctgcccccgccggaatctcatctcctacgcctcaaacccccaccccgcgacgccgcctagccgcgattttcctgcggggtactccaccgcccctggaggctggagccgtgctctccggatcggcgttggattggtgagcccgcgtgctggagctcgtgagctgtctatagggttttgattggagggattttcgtttgatccgttgtttctggtgaggtgaatgatgccggattcgtggatgcaggtagcgctcgcgtcctgctctgtcgggcggcgatatgaagccccctgcatcctccgccgccgctgccggcgacaagggcggcggggtcgacccgtctctgccgcggttcaagtgccaggagtgccaacgcgcgctcgtcgtcgtcggcgtcgagtccttcaccgataagctccccgctcatgccgtctccggtaacccttgcctcctcaaccgattagctcccttttccctttgttggctcgtcgtaattccatcgactcgaatcggaatcgataggtagaaaatttattcggttttggtatggtattagcatcgcatgagccaggaaattggggcatgattggttgaaaaatgctaggaattgctgcactatttgttacaagagctttttatcaatgcaggtatgaacgtgtcctctgttcagggcagcgttatgggtgctagcaggatggacaactcttatgtcgtgctatcgaagcaaaatagatcacatagccatggaattcccccacgcccgccaagcgcagggatcccgcgtgccgagccgaaccaaccaacaagagcaatggagggatcatatatagtgcttccacctgctgccgcttccatatacaagacatctgcctctgaaggaggtggtgcgcagttgtcaccaacaagtatgaaccccggtagccctttaccaggaaataattttcactctagcgtgactgtattaaaacgggcatttgagattgctacatcacaaacacaggtactacaatgacttctgtaagatgcctctgtattgaatgagaacacgtgcttttgccatttctgtcattttacctttgtttcccatttattagcttgtgcagttgctagttattgcatcagatttgcatgtttttgctactatatgttgagggttcattgccatctgttagtattttgagaggaacaatgtcaagaccgctgataatctggaatatacttgtagattgaacagccactctgtctggactgtatgaggttgctgtctgataaaatggagaaggaaattgaagatgttaatactgacaataaagcttatgaggcctgtcttcaacgtctggagcaggaaacctataacatcctcagtgaaactgactttcagaaggagagacaaaaggtggtaatctttcttacatatttatggtcatatcgtgattaatgagatcctaaagtgcatgacagcctgctgctttggacaaaaataagtaaggcagaagtttcttttgatagatgaaacacataggtagtgagcaatgttttaaatgaacaaataattcccttgtaacttctctgtaagagaattcttgcccacttataaaaatgttgaagtgcaacagttcctgaagaagttgcctacttgacctttcttatgtgaaaaaaaaaagaataagcacctctgactggtcagtggccatgattttcatggaactaaatgtattatgtgttctgccatttcagattgaggaagaagaaaagaaacttaaagctgcaattgaggaagctgaaaagcaatattcagaaatttgttccgagatgaagtgccttgaaacaaaatctaaacagttcgaagaactggaagaaaggttaaaattttaattaaccttttcattttgtcctttcttgaatgttcttattattaactctgaagtttctctacaagaatcagtgatatagagtcttcagtgatttataatttgcttttgggtgtgcatgtgcatacttgcaggaggctctcgactcttctctgtctctcttttttttctgatgagtcgtaacattgttataggctatgaatacaactgttatattgaaaacattaatgtgtacctatatttgtcacctgaaactagacattattcaacagagtgtcagtgtgctattcaatataattggcaattcgacatcagaaaataggagtatcattatttgggaataataacataatacatcccacacatgttttgttatatcgctacaacaattgctagtggttttgtgcaatctgaaatatttggttggctcatgttatttgtgaagttctacagttacttgttaaacaaatctgatttatcatatttttgaaacaggtattgccatgatctcaatagctttcagtttcagtggatatctcaccaggtaaatacctactacaggccctataaatatttacttagcactattttcttgatgtcatgttttgacttcttgttagcacaaaaacctaaaaacattgttattttctagcagaacatagaaacaaccaaatgcactatattccagatttgtcatatactcaatagctaaagctatataaactaagtctatagctgccatgttttgtacttttgttggtataaataaacctctttaaaaattaacattgtttgtgaataatgctctgtgtctgtactatcatgttttgcgctgccttcataatagaaaataactagctgaatgcccatgccttgctacgttatactatagtattgcctaaaataaataaaaatatattttacatgaaatgtgttgcccatccttttgttataaggaatattcaccttaatttgattttatatgtggctatccatttagatttggttgtcttttaacatgaagacgctcaaggagtaatttataaaattttcaatgggactaagtgggttggcagattcactgccatcaccagttcaccactaccttctattataggagcatagatattataatatgtattggttccttatacataagcttcataatgtctgggctgtttgcaagcatttgcctgtcaataactcatttttttgtcactttcaggaagaaagagatgcggttttggccaagatagaagtttcgcaggttcatctagaattgttaaagcgtacaaatgttctcaatgatgcattctatatttcacatgatggggtgatcggaacaataaacaactttcgtcttggccgccttcctaatgtacaggtaattatgcaaaatgtgcagatatcacgtccattcactatcttttagtgctttccttgaattctattcaagatgtacatggaatgttcatgttgatcctttgtgttaatgtaacaactgtgttactcttttcttaggtggagtgggatgagataaatgctgcttggggccaggctgctcttctgttgcataccatggctcagtacttcttcccaaaatttgagtatcctttatacagtgacattatttttgctacagtttatttgctggtcattctcttgagaagtaattcatacatggcatttacctccatcaactagttatacaacattacgacatacatgtttcagtgcattttagttgttactccatgtagttgtttgctttgttctttctgtatggctctgtgttcaaaatatgtttattctatatgaatcgagcttgtctatatgttataacaagttggaaagatagtgttggatggttattggttagggtgaatgcataattgcatattatagtcttttattggattgcatgatgtgtttttagcagatcttctctcataagtagcattaaaaatgtgtatgtacattgaaaaggacaaatcctaatactctacaattgttgacgaaatgataattgtgctacctgaacatttatctagataccggatcaaaattcaccctatgggaagctatccaaaagttacagacatcaaccaaaatacatatgaactgtaagcttcctgctggaaattgtactccctttgttattctcttttcaaaaacttgtaaaatattggtactgtaatattccttattttcataatgtatattatatttttttctgaagaacaaattctgctgctagtaaggaatctaggatgtccctcatgaaataggcaacttatgcttattttgtcatacctgatcactttcctggtggtaataattttcttttacattggttaacacatccacaaacttttaaataaatcatgttgtcaattcgctttcactgagcacatgttatgttgagtggtgcaattatttgggactggtataaaatcatcatttggcggccgttctaattttggaaaattcactctgggggtttactttgtatatttattcttatcttgcacagtggaattacattataccaagttaataggctgcactgttaatgttcaggttcggtcctgtgaatttattctggagtacccgatttgacaaagccatgacatggtttctgacttgcttgcaagaatttgctgattttgctgttagtttggataaagagaacaatgtaccacctgacaagtcattgaagctcccatataagtaagttttattgcaactttcctatactatgatctcttagtatatgaattgcatggttcatgctaagacacaaattagccatcattgaacatcacctaagtgaaatcaatgtaaatactttaggttttactagtgataaaacaaaataattaagacaggttagtaagttatgcggttatggtttctcttttgttcatatgactagtattttgacagttggatatatcttatatacacaacgttgcttgtgccgctctttacttgaataacttcgcttgcaggattgaaggtgacaaagtagggagctatacaatcttcttaagtttcaataaacttgacaattggacaaaagcactaaaatacatgctgtgcaacttgaagtgggttctctactggtttatcggcaatacaagttttgccccaccctctggatctttacacgtagcacagtcttccaagggatgaagtcactggcttgtgatgctgattataagcgcatattggcaaatggcattgactaggctcgtttgtaatttacagtagtacatacagctagttttttttttccttttggccgccttcagttgtacttcctccgtttcacaatgtaagtcatcatagcatttcccatatttataatgatgttaatgaatctatatagatatatatgtctagatttattaacgtcaatatgaatataggaaatgctagaatgacttacattgtgaaacggggggagtatatatggttgaaatctgcacaggagaaattgcagatgatggtgcaactcagcttatagtcggcttgatcattattcatgtaattatttagccatgtgtgacagaaaatgcgagtgatacgagatcctagagcaattcatgcagctctggttaggtgagtttgtgatggtgcaatcaacagcatatccaatcaacattaagatttataagagatgaaatgtcttcagc</dnaseqindica> 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| External Link(s) |
