Os03g0672900
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os03g0672900 |
|---|---|
| Description |
Similar to RXF12 protein (Xylan endohydrolase) (F19C14.2 protein) |
| Version |
NM_001057411.1 GI:115454550 GeneID:4333697 |
| Length |
2474 bp |
| Definition |
Oryza sativa Japonica Group Os03g0672900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:27337009..27339482 |
| Sequence Coding Region |
27337009..27337394,27337478..27337658,27337779..27339482 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:27337009..27339482 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:27337009..27339482 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgatcggcggcgacgcggggcaggtggttggcgatggcggcgccggtgccggcgacgacaacatcatcctgaacccggagttcgacagcgggctggacaactggtccgggagcgggtgcaagatcgagctgcacgactcgctcgacgacggcaaggtgctcgccgtcagcggcaagtacttcgtggcggcgacggggaggacggacacgtggaacggcgtgcagcaggacgtcacgtcgcggctgcagcggaagctgctgtacgaggtcgccgccacggtgcgcctctccggcgccgccgcgacgccgtcgccgtgcgaggtccgggccaccgtcgccgtgcagaacaccgacggccggcagcaatacatcagcgtcgccaagtcgccggcggtgtcggacaaggagtgggtgcagctgcaggggaagttcctgctgaacggcacggtggccaaggcggcgatctacatcgagggcccacctgccggcgtcgacctgctgctcgacagccttgtggtcaagcacgcccagaaggccacgccggcgccggcgccggacttcaagaacctggaatatggcgcgaacatcctgcagaacagcgacctggacgacggcgtgaacgggtggttcgggctcggctcgtgcgcgctctccgtccacggcggtgcgccgcgcgtgctcccgcccatggcgcggcagtcgctgtcgccgctcgacggcgacgacggcgacggcgacgagccgctcaacgggaagcacatccacgtcacgaaccgggcgcagacgtggatgggccccgcgcaggtcatcaccgacagggtgacgccgtacgcgacgtaccaggtgtcggcgtgggtgcgcgtcggcgggcagcaggcggccggcaagccgcagaacatcaacgtcgccgtcgccgtcgacagccagtggctcaacggcgggcaggtcatggcgctggacgagcggtggtacgagatcggcgggtcgttccgcgtcgagtcgtcgtccacgccgccgtcgcgcgtgatgctctacgtccagggccccgaccccggcgtcgacctcatggtcgccggcctccgcgtgttccccgtcgaccgcaaggcccgcgccaagcacctccgcaagctcaccgacaaggtgcgcaagcgcgacgtggtggtgaaggtgacggcggcggcgggcggcgccgccgccgccgacggcgtggaggtgcgggtgcggcaggtgtcgaacagcttcccgctgggcgcgtgcatcatgcggaccaacatggacaacgaggactacgtggacttcttcaccaagcacttcaactgggcggtgttcgggaacgagctcaagtggtactggacggagccggagaaggggcagctcaactacgccgacgccgacgacctcctcaagctctgcgccgaccacggcatgtgcgtgcgcggccactgcatcttctgggaggtggacagcgcggtgcagcagtgggtgaaggcgctgcccgccgacgagctctccgccgccgtggccagccgcatcaacggcctcctcacccggtacaagggcaagttccggcactacgacgtcaacaacgagatgctgcacgggtccttctaccaggacaagctcggcgccggcgcgcgcgccgccatgttccgggcggcgagcgagctggacccggatgcgctgctgttcgtcaacgactacaacgtcgagggcgcgtgcgtcgacgtccgcgcgacgcccgaggcgtacatcgcgcaggtgaccgggctgcaggagcagggcgcggcggtgggcggcgtcgggctgcagggccacgtgaccgcgcccgtcggcgccgtcgtgcgcgcggcgctcgaccggctcgccgtgctgggcctgccgctgtggttcacggagctggacgtgtcgtcggcgaacgagcacgtccgcgccgacgacctggaggcgatgctccgggaggcgtacgcgcacccggcggtggacggcgtcgtgctctgggggttctgggagctctccatgagccgcgacgacgcccacctcgtcgacgccgagggggaggtgaacgaggccggccgccgcctgctgcagctcaagcgggagtggctcacccgcgcgcacggccgcgccgacggcaacggcgagttcaggttccggggccaccacggcgcgtaccacgtcgacgtcgtcacgcccgccggcgccaagatctcccaggagttcaccgtcgacaaggatgacgcgccgctcgtgctcaacatcaccgtgtga</cdnaseq> |
| Protein Sequence |
<aaseq>MAIGGDAGQVVGDGGAGAGDDNIILNPEFDSGLDNWSGSGCKIE LHDSLDDGKVLAVSGKYFVAATGRTDTWNGVQQDVTSRLQRKLLYEVAATVRLSGAAA TPSPCEVRATVAVQNTDGRQQYISVAKSPAVSDKEWVQLQGKFLLNGTVAKAAIYIEG PPAGVDLLLDSLVVKHAQKATPAPAPDFKNLEYGANILQNSDLDDGVNGWFGLGSCAL SVHGGAPRVLPPMARQSLSPLDGDDGDGDEPLNGKHIHVTNRAQTWMGPAQVITDRVT PYATYQVSAWVRVGGQQAAGKPQNINVAVAVDSQWLNGGQVMALDERWYEIGGSFRVE SSSTPPSRVMLYVQGPDPGVDLMVAGLRVFPVDRKARAKHLRKLTDKVRKRDVVVKVT AAAGGAAAADGVEVRVRQVSNSFPLGACIMRTNMDNEDYVDFFTKHFNWAVFGNELKW YWTEPEKGQLNYADADDLLKLCADHGMCVRGHCIFWEVDSAVQQWVKALPADELSAAV ASRINGLLTRYKGKFRHYDVNNEMLHGSFYQDKLGAGARAAMFRAASELDPDALLFVN DYNVEGACVDVRATPEAYIAQVTGLQEQGAAVGGVGLQGHVTAPVGAVVRAALDRLAV LGLPLWFTELDVSSANEHVRADDLEAMLREAYAHPAVDGVVLWGFWELSMSRDDAHLV DAEGEVNEAGRRLLQLKREWLTRAHGRADGNGEFRFRGHHGAYHVDVVTPAGAKISQE FTVDKDDAPLVLNITV</aaseq> |
| Gene Sequence |
<dnaseqindica>1..386#470..650#771..2474#atggcgatcggcggcgacgcggggcaggtggttggcgatggcggcgccggtgccggcgacgacaacatcatcctgaacccggagttcgacagcgggctggacaactggtccgggagcgggtgcaagatcgagctgcacgactcgctcgacgacggcaaggtgctcgccgtcagcggcaagtacttcgtggcggcgacggggaggacggacacgtggaacggcgtgcagcaggacgtcacgtcgcggctgcagcggaagctgctgtacgaggtcgccgccacggtgcgcctctccggcgccgccgcgacgccgtcgccgtgcgaggtccgggccaccgtcgccgtgcagaacaccgacggccggcagcaatacatcagcgtcgccaagtacgacacacgcacacacatctctcgaatcgatcctctcctcgatcgccggttcttctgatggatcggtggcggcggtgcaggtcgccggcggtgtcggacaaggagtgggtgcagctgcaggggaagttcctgctgaacggcacggtggccaaggcggcgatctacatcgagggcccacctgccggcgtcgacctgctgctcgacagccttgtggtcaagcacgcccagaaggccacgccggcgccggcgccggacttcaaggtgacagactgacagtcacctcacctcgccgccggccaactctgcttcatcactgatggagcacgaatcttaaagcacccgtacgtcatcgtgtttttttttttaaattcttttttgcagaacctggaatatggcgcgaacatcctgcagaacagcgacctggacgacggcgtgaacgggtggttcgggctcggctcgtgcgcgctctccgtccacggcggtgcgccgcgcgtgctcccgcccatggcgcggcagtcgctgtcgccgctcgacggcgacgacggcgacggcgacgagccgctcaacgggaagcacatccacgtcacgaaccgggcgcagacgtggatgggccccgcgcaggtcatcaccgacagggtgacgccgtacgcgacgtaccaggtgtcggcgtgggtgcgcgtcggcgggcagcaggcggccggcaagccgcagaacatcaacgtcgccgtcgccgtcgacagccagtggctcaacggcgggcaggtcatggcgctggacgagcggtggtacgagatcggcgggtcgttccgcgtcgagtcgtcgtccacgccgccgtcgcgcgtgatgctctacgtccagggccccgaccccggcgtcgacctcatggtcgccggcctccgcgtgttccccgtcgaccgcaaggcccgcgccaagcacctccgcaagctcaccgacaaggtgcgcaagcgcgacgtggtggtgaaggtgacggcggcggcgggcggcgccgccgccgccgacggcgtggaggtgcgggtgcggcaggtgtcgaacagcttcccgctgggcgcgtgcatcatgcggaccaacatggacaacgaggactacgtggacttcttcaccaagcacttcaactgggcggtgttcgggaacgagctcaagtggtactggacggagccggagaaggggcagctcaactacgccgacgccgacgacctcctcaagctctgcgccgaccacggcatgtgcgtgcgcggccactgcatcttctgggaggtggacagcgcggtgcagcagtgggtgaaggcgctgcccgccgacgagctctccgccgccgtggccagccgcatcaacggcctcctcacccggtacaagggcaagttccggcactacgacgtcaacaacgagatgctgcacgggtccttctaccaggacaagctcggcgccggcgcgcgcgccgccatgttccgggcggcgagcgagctggacccggatgcgctgctgttcgtcaacgactacaacgtcgagggcgcgtgcgtcgacgtccgcgcgacgcccgaggcgtacatcgcgcaggtgaccgggctgcaggagcagggcgcggcggtgggcggcgtcgggctgcagggccacgtgaccgcgcccgtcggcgccgtcgtgcgcgcggcgctcgaccggctcgccgtgctgggcctgccgctgtggttcacggagctggacgtgtcgtcggcgaacgagcacgtccgcgccgacgacctggaggcgatgctccgggaggcgtacgcgcacccggcggtggacggcgtcgtgctctgggggttctgggagctctccatgagccgcgacgacgcccacctcgtcgacgccgagggggaggtgaacgaggccggccgccgcctgctgcagctcaagcgggagtggctcacccgcgcgcacggccgcgccgacggcaacggcgagttcaggttccggggccaccacggcgcgtaccacgtcgacgtcgtcacgcccgccggcgccaagatctcccaggagttcaccgtcgacaaggatgacgcgccgctcgtgctcaacatcaccgtgtga</dnaseqindica> |
| External Link(s) |
