Os03g0691800

From RiceWiki
Revision as of 19:41, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0691800

Description

Similar to HIPL1 protein precursor

Version

NM_001057492.1 GI:115454712 GeneID:4333783

Length

5425 bp

Definition

Oryza sativa Japonica Group Os03g0691800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28429446..28434870

Sequence Coding Region

28429468..28429573,28429666..28429835,28430676..28431467,28431648..28431864,28432438..28432616
,28433058..28433299,28434128..28434518

Expression

GEO Profiles:Os03g0691800

Genome Context

<gbrowseImage1> name=NC_008396:28429446..28434870 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28429446..28434870 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaacagcaagagcctgctcctctgctggtgctcgctcctcctcctcctcctcgccgccgcagcgccgcccgccctcgccctcccgctctgcaccgactccagggcgccggtgccgctgaacgggacgacgctgggcttctgcggcggcggggggagcgggagcagcagctgctgcggcgccgcggatgatgccgcgctgaggaagcggttcgaggcgatgaacgtctccgacgccgcgtgcgccggggtcgtcaagtccgtcctctgcgcgaaatgtaatccatattcggctgagttgttcaactcaagctcaaagattcggatggttcccgtcctgtgcaatggatcagcttcagctagttctactcaatcgaaggattctacacaagactactgcaaactagtttgggaaacatgcaagaatgtgacaatactgaattctccttttcaatctcctttgcaaggtggtgcaacattacctagttcatcatcaaaacttactgatgtttggcagtcagaaaatgacttttgtacatcatttggtggctcatctgacaaccagtcagtatgcttaaatggaaatgaagtttcatttagcacttcagaaccatcacccagtcctaaaggggtgtgtattgagagaattggaaacgggacatacttgaacatggctcctcatccggatggatccaacagagttttcttgtctagccaagcaggtaaaatatggttggcaactgtcccagaacaaggctctggaggcattctgcaatttgatgaagccagcccatttattgatctaactgatgaagtccactttgattctgagtttggactcatgggtatagcatttcacccaaagtttgctaccaatgggcgcttctttgtttcttataattgtgacagaactcagtcatctaactgtgctggtaggtgttcatgtaattctgatgttaactgtgatccttcaaagcttggatctgataatggtgcccagccatgccagtaccaagttgttgttgcagagtactctgcgaaagtctcatcatcaaatgtttcggaggcaacatctgctaatccatccgaggttagaaggatatttacaatgggactgccatatacagcccaccatgggggacagatactttttggacctacagatggatatctgtaccttatgatgggtgatggtggaaacaaaggcgacccttttaatttttctcaaaataagagatcacttttggggaaaattatgaggcttgatgttgatggcgttcaaagccagagtcaaatcattaaccagagcttgtggggtaattattctgttcctaaagacaacccattcagtgacgaccgagacttacaaccagagatttgggccttgggcttgaggaacccatggagatgtaattttgattctgagaggccttcctatttctactgtgcagatgttgggcaggatttatatgaagaggtagatttgatctcgaagggtggaaactatggatggcgtgcatatgagggcccatacatttatcatccagaatggactcctggagggaatacatcgcttaattctataaatgccatcttccctgttatgggctacagccattctgctatcaacaagaacactgggtctgcatcaattacaggtggatttgtttatcgagggtcttctgatccctgcctatatggaaggtacatatatgctgatctttacgcgtcagcaatgtggaccggcacagagaccccagagagcagcggaaactacacctcaactctgattccgttcagctgctccaagaactctccaataccctgcgaatctgcatcaggcagcaaccaaccatcgttgggctacattttctccttcggcgaggacaacaacaaggatgtcttccttctaacatacaaaggcgtctaccgagttgtccggcctagcctctgcggctacacctgtgccgcggagaaaccagagaccaacaacaatggaacgtctccctcaggctcttcatcatttgcttcaggaaggaggatagggaagttggcagtagtaatggcgtttgttttgtgtgcattattcttctga</cdnaseq>

Protein Sequence

<aaseq>MANSKSLLLCWCSLLLLLLAAAAPPALALPLCTDSRAPVPLNGT TLGFCGGGGSGSSSCCGAADDAALRKRFEAMNVSDAACAGVVKSVLCAKCNPYSAELF NSSSKIRMVPVLCNGSASASSTQSKDSTQDYCKLVWETCKNVTILNSPFQSPLQGGAT LPSSSSKLTDVWQSENDFCTSFGGSSDNQSVCLNGNEVSFSTSEPSPSPKGVCIERIG NGTYLNMAPHPDGSNRVFLSSQAGKIWLATVPEQGSGGILQFDEASPFIDLTDEVHFD SEFGLMGIAFHPKFATNGRFFVSYNCDRTQSSNCAGRCSCNSDVNCDPSKLGSDNGAQ PCQYQVVVAEYSAKVSSSNVSEATSANPSEVRRIFTMGLPYTAHHGGQILFGPTDGYL YLMMGDGGNKGDPFNFSQNKRSLLGKIMRLDVDGVQSQSQIINQSLWGNYSVPKDNPF SDDRDLQPEIWALGLRNPWRCNFDSERPSYFYCADVGQDLYEEVDLISKGGNYGWRAY EGPYIYHPEWTPGGNTSLNSINAIFPVMGYSHSAINKNTGSASITGGFVYRGSSDPCL YGRYIYADLYASAMWTGTETPESSGNYTSTLIPFSCSKNSPIPCESASGSNQPSLGYI FSFGEDNNKDVFLLTYKGVYRVVRPSLCGYTCAAEKPETNNNGTSPSGSSSFASGRRI GKLAVVMAFVLCALFF</aaseq>

Gene Sequence

<dnaseqindica>23..128#221..390#1231..2022#2203..2419#2993..3171#3613..3854#4683..5073#agacccctccacggcgacggccatggcgaacagcaagagcctgctcctctgctggtgctcgctcctcctcctcctcctcgccgccgcagcgccgcccgccctcgccctcccgctctgcaccgactccagtgagtagtgtgattccggcgtgccgttcctctgttctggactcctttttgttttttgttgttgagttttgtgtgtggttgatcgggtgcaggggcgccggtgccgctgaacgggacgacgctgggcttctgcggcggcggggggagcgggagcagcagctgctgcggcgccgcggatgatgccgcgctgaggaagcggttcgaggcgatgaacgtctccgacgccgcgtgcgccggggtcgtcaagtccgtcctctgcgcggtacgcacggatcgttactacctctgcttatcaatttatcatgagtttccgtggccgtctcgtcttcaggggaaaaaaaatctgaagaccaaaaaaaaaaaagtactagtgttggttcagcagtttctgctgtttgggttgcataccaagtgttcgatgttttgcctgatcaggctgatattccggggggaggttctaagctgagcacttttttttttcattctcggggatgatgatagtgttgatcagtcgtattagcattccaaatgttggtagccgaaatctctaaaccaaactcatgaaccaccctcacagcgaacaacttaactgaatccttgggcattattcttcccatgttgtgatgactgctgagtccacgcgctgcacacctctgcccaacactatcactcgttgacttcatagagggatgggcagcaatccaagtaccatttattcttgaatcagatattggataggtgtgttgtgattcaagactcttaacataccaggatatagccgtactcttattactataagaatctaaaaaggaaaagcaatagaattttcatgtaaaccgcctttggttctaataaaaagttcgtctaaatcattaaaaaggaggtgtgactgggtcatgcatggggtaaagccattgggttttactgtgtataatgataataacaacaacactgcctgactgccatgtgatgatcagtacttgcagtaggacatggatttcaagagatattctgctgtttattttttctgtgagctgatagttactacttatttgttgctcgtagacatcaatgctaaaatattttctaatcttgtatccagaaatgtaatccatattcggctgagttgttcaactcaagctcaaagattcggatggttcccgtcctgtgcaatggatcagcttcagctagttctactcaatcgaaggattctacacaagactactgcaaactagtttgggaaacatgcaagaatgtgacaatactgaattctccttttcaatctcctttgcaaggtggtgcaacattacctagttcatcatcaaaacttactgatgtttggcagtcagaaaatgacttttgtacatcatttggtggctcatctgacaaccagtcagtatgcttaaatggaaatgaagtttcatttagcacttcagaaccatcacccagtcctaaaggggtgtgtattgagagaattggaaacgggacatacttgaacatggctcctcatccggatggatccaacagagttttcttgtctagccaagcaggtaaaatatggttggcaactgtcccagaacaaggctctggaggcattctgcaatttgatgaagccagcccatttattgatctaactgatgaagtccactttgattctgagtttggactcatgggtatagcatttcacccaaagtttgctaccaatgggcgcttctttgtttcttataattgtgacagaactcagtcatctaactgtgctggtaggtgttcatgtaattctgatgttaactgtgatccttcaaagcttggatctgataatggtgcccagccatgccagtaccaagttgttgttgcagagtactctgcgaaagtctcatcatcaaatgtttcggaggtatgcattttgatacactcttctgtgcaaatattgacatcaatgctctttgcttatccttattcttcttccgtgtgttctcttattttcgaagacacaatgcagcatgtatataaaatgaaagaagatatcacagagttgacatttcagtagcattctcatcatatatttattttctaggcaacatctgctaatccatccgaggttagaaggatatttacaatgggactgccatatacagcccaccatgggggacagatactttttggacctacagatggatatctgtaccttatgatgggtgatggtggaaacaaaggcgacccttttaatttttctcaaaataagagatcacttttggggaaaattatgaggcttgatgttgatggcgttcaaagtaagttagtaatatggattttgttttcatggttgttcgtaatgtcatttcattgactattccattattataatttgttaaattgatgccatgtgtaactgtttcatctccatgttcctgttgtatagaaagattattctgttggaaattttataattgctttattcaaatgcccactatgtataatttaatattctttccttcctgaataccagggtactagtaactatactaaatgaagcagcctacactaagaaaatgatagcattaaaaatttgcaccgtttggtgtttacataattatttaatgtgcacatgtttctggatggttgagattataaaaaaatatagctgacaatggtaaattgtaattttgtgtctgcggtcctagtttgatatcagaataacattacgtgactgtttacatttgtcagccaaagctattttatcaggtgaacacactgtcctttcggaactttctggatgaaaatagtcatgccattactgcatcttcatgatatggtatttactttttattagattattgctccttcacagtattgttgcttttcaggccagagtcaaatcattaaccagagcttgtggggtaattattctgttcctaaagacaacccattcagtgacgaccgagacttacaaccagagatttgggccttgggcttgaggaacccatggagatgtaattttgattctgagaggccttcctatttctactgtgcagatgttgggcaggtaatgtttctgaaaatattggcaagtgggcaaccacttcatattgtcatgtgcatgttacacaactcatttaagtctcttctttgcaactgagctcttttaatatgggctactgaactagatttggacatgatcatgcattctcttgctaaaatttccatttttatgtaagggtttgtagttactatgcacatgtttaagcctttttaaaaccccatacgggtccatattttgtgaagattcacatatggaaaatcgtgtaagaatcttgccttgttttcatcatctatggtattcttttgcagtatgtactgttctttttgctcattatgtttgaaggctgagaattatttcgggtacaatataatatggactgtcaggatgcattttgatctgaccatttgcttttattggcatttttaccttgacatacatccataggatttatatgaagaggtagatttgatctcgaagggtggaaactatggatggcgtgcatatgagggcccatacatttatcatccagaatggactcctggagggaatacatcgcttaattctataaatgccatcttccctgttatgggctacagccattctgctatcaacaagaacactgggtctgcatcaattacaggtggatttgtttatcgagggtcttctgatccctgcctatatggaaggtttgtatctgctattagttggtttcttaacatttcataattttggagcaaatgacgtaaaaaatgactccatgcagcatgagtaaagttttccatgtatctagtttcattaggtaacgtgtacgctggaattcatcatttagaaccagttacactacctattcacaaccaatcatggcacatgctatatttctatcatgtcaagccaacagtgcaacttcacttttttttagaacttatggtgcgcaaaatagtttgtgcattaattgtaaaacaaatgcatatatacagtatatttctaatgaaaaaataaaaatatggattgagcatgtagaaaagcactttgttgggctttgcaagacagaagcatataacatgttaagtgcagaacttttcactctgatgcttattcatcaatccctatttttgtaggtagtcaccctagtactagtttttgtgtataccatttgcagttacaatagcaccctaaccatacattttcatctttgcacaccgacatatattcaccaatccttccattgaagaacatgactttaatagcaacttgaggattgatgaatatcaatatcattcacatttacaagctgcatagtaattaaccaaacgactatttgttcttctagtaatgagccgtgatagtaacatatcatctattctgatatatattaatcaatcctcatagtaatatgcatattgccagtattgttcttctagtactattatttgtgtttaccatttacaattacaagttgcgcagcaaaattagctatagaaattacaatttctatccccttgatatgtgttcaggtacatatatgctgatctttacgcgtcagcaatgtggaccggcacagagaccccagagagcagcggaaactacacctcaactctgattccgttcagctgctccaagaactctccaataccctgcgaatctgcatcaggcagcaaccaaccatcgttgggctacattttctccttcggcgaggacaacaacaaggatgtcttccttctaacatacaaaggcgtctaccgagttgtccggcctagcctctgcggctacacctgtgccgcggagaaaccagagaccaacaacaatggaacgtctccctcaggctcttcatcatttgcttcaggaaggaggatagggaagttggcagtagtaatggcgtttgttttgtgtgcattattcttctgagatgtccatccctgttagcttgttatatatcatgtatggtttctttcgcacctgctgtacagcattgacgagccctacacgtctgtgtgactgtttgtgattattagtagtatttggttgtgcttagttctcaagtggtgggcttgtgcaatgtagcattgtgatgactgaaaattaattagccgtgcttgcctttaggattgggcaatgggcaagaatatttggcaagtggaaccacgttactgttataaatgaaagttgtacggggggtaagctttgttctgaacctttagttttcgggcttgtttggtttggtgctaaattatgcccaactaattcattggtaattttg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0691800, RefSeq:Os03g0691800