Os03g0738000

From RiceWiki
Revision as of 19:42, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0738000

Description

Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 domain containing protein

Version

NM_001057742.1 GI:115455212 GeneID:4334044

Length

3586 bp

Definition

Oryza sativa Japonica Group Os03g0738000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:31025608..31029193

Sequence Coding Region

31025609..31025659,31025736..31025929,31026041..31026102,31026242..31026322,31026437..31026510
,31026593..31026675,31027090..31027193,31027572..31027711,31027782..31027829
,31027985..31028037,31028224..31028308,31028392..31028458,31028542..31028652
,31028746..31028798

Expression

GEO Profiles:Os03g0738000

Genome Context

<gbrowseImage1> name=NC_008396:31025608..31029193 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:31025608..31029193 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cttcgcttcgccggaggagggggagatggaggaggaggaagcggcgccggagcggagtattcgtggcctcagctccggttcgacctcccgccccgccgcctctaccacttcgctggccagttccgctccgccgccgccgccgcctccgcctccgcgggcaacttcctcaagggcgtgaagtggtcgcctgacgggtcctccttcctcaccagctgcgacgacaactccctccgcctcttctacctgccggaggaagcgtacagtaccgaggccgagcaccctgctgaggccgctgttggaggtgaagattcctatggtgcaagcatccaagtgaacgagggtgagcctgtatatgacttctgctggtacccctacatgtctgtatctgatcctgctacgtgtgtatttgcgacgaccagtcgtgatcatccaatacacctctgggacgctaccactggggagcttcggtgtacttacagagcgtatgatgccatggacgagataacggctgcactttctatatccttcaattctactggtactaagctctttgctgggtacaacaaagcaattagagtgtttgatgttcaccgccctggtagagattttgagcagcattctttgcttaaaggatgtgaagggccgactggtataatatcttcaatttcattctctcctcacaacgggatgcttgctgttggttcatacagccagacaacagctgtgtatgcggagagtaacatggagcctttatatgttttacatggccagcttggtggtgtcacacaggtactcttttcaaaagatggaaactatttgtatactggagggcgcaaggatccatacatactatgttgggatatccgcaacactgtggacattgtttacaagctgtacaggtcgtctgatactactaatcaaaggatacattttgatattgagccttgtggcaggcatcttgccactggcgggcaggatggcatggtacacatttatgacctccaaggtggtcagtgggtaacagccttccaagcagcagctgataccgtaaatgggttcgcgtttcatccataccttcctttggctacaacatcttctgggcacagaagatttggcatggaggatgaaattgaagaagagctgagcttggctggtgatgagaactgctgctcggtctggaaattttcttccttgcaagaagcttga</cdnaseq>

Protein Sequence

<aaseq>LRFAGGGGDGGGGSGAGAEYSWPQLRFDLPPRRLYHFAGQFRSA AAAASASAGNFLKGVKWSPDGSSFLTSCDDNSLRLFYLPEEAYSTEAEHPAEAAVGGE DSYGASIQVNEGEPVYDFCWYPYMSVSDPATCVFATTSRDHPIHLWDATTGELRCTYR AYDAMDEITAALSISFNSTGTKLFAGYNKAIRVFDVHRPGRDFEQHSLLKGCEGPTGI ISSISFSPHNGMLAVGSYSQTTAVYAESNMEPLYVLHGQLGGVTQVLFSKDGNYLYTG GRKDPYILCWDIRNTVDIVYKLYRSSDTTNQRIHFDIEPCGRHLATGGQDGMVHIYDL QGGQWVTAFQAAADTVNGFAFHPYLPLATTSSGHRRFGMEDEIEEELSLAGDENCCSV WKFSSLQEA</aaseq>

Gene Sequence

<dnaseqindica>2..52#129..322#434..495#635..715#830..903#986..1068#1483..1586#1965..2104#2175..2222#2378..2430#2617..2701#2785..2851#2935..3045#3139..3191#gcttcgcttcgccggaggagggggagatggaggaggaggaagcggcgccggagtgtacggacgccatggggagcgaggcggcggcgggggatgtggctgagactgaggaggtggtggtggcgtcggaggcggagtattcgtggcctcagctccggttcgacctcccgccccgccgcctctaccacttcgctggccagttccgctccgccgccgccgccgcctccgcctccgcgggcaacttcctcaagggcgtgaagtggtcgcctgacgggtcctccttcctcaccagctgcgacgacaactccctccgcctcttctacctgtgcgtcgccccccctctcgtcttctcgtgtcttgtggcttctctcgcggtgttgaagcaatgcaccgaactgatctttttttttctttatatttctgggacaatgagcaggccggaggaagcgtacagtaccgaggccgagcaccctgctgaggccgctgttggaggtgaaggtgcgtctgggataaatgactttctttcttttttttctgtaaactagtatagttattttgttgttgaatgtttgctagatttcaagtttttgttggcgtaatttaggatgtataatgttgttgatttttttttctgcagattcctatggtgcaagcatccaagtgaacgagggtgagcctgtatatgacttctgctggtacccctacatgtctgtatctggtgggtgaattgcttcctatgtactgctgtttaggatcatttgttatttgtgattgtttggtgaaatatgtgaatatgtgatgcttgaatttggggttctgtgtcacgttgcagatcctgctacgtgtgtatttgcgacgaccagtcgtgatcatccaatacacctctgggacgctaccactggggaggtagaattggcggcttgtgcttgtttcgtttggagttgataatcagttattcgtttgagatgatctattgtgagaattgcagcttcggtgtacttacagagcgtatgatgccatggacgagataacggctgcactttctatatccttcaattctactggtactaagtatgtacaatgcactcaaccttcttaactgcatttatattgcatgagtaaatttgctagtgcatttttgtggaaccatgagattctactctcacctaagtgtgggaagttgattgtgttttactgatatactacctccatcctttaatatatgacgttggtttgttcaccaacgtcctacattaaaagaacagagggagtatgatatttgctacgaatgtttttggtttgaaccaaaatcttgttggttcgaaaataacatatacaatgtttgtactgaacttactgggctacatcttagaccatagagtctacctatatgttagctactaaagtagaccaatggtcgtgcaactacactataacataatcttcttggctgttatactcaatggaggtatgatgtttttgtaggctctttgctgggtacaacaaagcaattagagtgtttgatgttcaccgccctggtagagattttgagcagcattctttgcttaaaggatgtgaagggccgactggtaagtgacagtttaaaacttccaatctaagtttgatttgcttgtatacctcatggcagcacataatttgttttggtttgggtaaaattgggatgcataaatggttgtttaattgtaatcattgtgtaactttggaaatctgttacacttgaaagcacaatcataatgtgtctgctaatttgaaatgggtacattagcttaaagcatgtttatgcacacactgaacatttatgcaccaaagtaccaaactattttggtgtttaatcttctcagatcactagggtattgataaagaaggccttaaatgaatgcttttttctttctgggtgagaggtgaaacaatcttatacgctgcttagctctttgtttgctccacaggtataatatcttcaatttcattctctcctcacaacgggatgcttgctgttggttcatacagccagacaacagctgtgtatgcggagagtaacatggagcctttatatgttttacatggccagcttggtggtgtcacacaggttcgtaaagcaaccatacaaatttacatcttattgtataaacagaagataacattgatggaaattttaggtactcttttcaaaagatggaaactatttgtatactggagggcgcaaggtaactaacactcgtgttcttctaacaattgatcttttgagactggcacttcacagttcaatccctttatgttatgagatttatttacccaattatttttagcatctgaagatgcttctgaactttgtgaattcatttctgtaatttctccctaggatccatacatactatgttgggatatccgcaacactgtggacattgtttacaagtaagcattttgtaatacaccttcaaatttatcatttttgttttgacgtctcattgtattgttaaggcacatcttgtgactatttccttagtcatggtagtcctttttttagagtaaagatcactatattgataacgatcatggtagtccttctcattgcttattttggtgggatcccttaatcaggctgtacaggtcgtctgatactactaatcaaaggatacattttgatattgagccttgtggcaggcatcttgccactggcgggcaggtgcgctcctcttgcctcccatctttccattggggttatatttttgtactagctcatcttaaaacagtccctttttttgataggatggcatggtacacatttatgacctccaaggtggtcagtgggtaacagccttccaagcagcagctggtatgtgtttctggtcttctgttgctagaggagttgatgtttctgtggtactccctttgtgatacctatctgtttaatcctagataccgtaaatgggttcgcgtttcatccataccttcctttggctacaacatcttctgggcacagaagatttggcatggaggatgaaattgaagaagagctgagcttggctggtgcgtgttatatatacttgctgttttctaaaatatggttgtgctgcttgaatggtgaacgctacacatttttccccctttctgcacgcttaggtgatgagaactgctgctcggtctggaaattttcttccttgcaagaagcttgaaagttgaaactacatcaaggcctggataagcgaaaattttggatcatagatgttgaaattgttgcaatcagtttgcagatggtgataccaacacttgaggcagtacatcaagccatgactataaaagcagtcaccaaagatcaccctgtgccaaggagaagctagtgtcgtgtgcatggtttcattgtcaaatggttgctccaactgttgcacatcgtattggtaacaactgatgtaggctgaagctagtaaagcataatgtattcatcgacagctacaatttgtccccttttgtactgatccaactcaaatgctttaacaatgtcggatgacatggaatgatggcaaagatgcactttgacccgtttataagaatagaatttatcttgcctagc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0738000, RefSeq:Os03g0738000