Os03g0794700

From RiceWiki
Revision as of 19:44, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0794700

Description

Similar to 40S ribosomal protein S18

Version

NM_001058076.1 GI:115455880 GeneID:4334407

Length

1885 bp

Definition

Oryza sativa Japonica Group Os03g0794700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33896219..33898103

Sequence Coding Region

33896681..33896786,33897452..33897639,33897744..33897905,33898009..33898011

Expression

GEO Profiles:Os03g0794700

Genome Context

<gbrowseImage1> name=NC_008396:33896219..33898103 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33896219..33898103 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgctgatcgccggggaggacttccagcacatcctgcgtctgctgaacaccaacgtcgatgggaagcagaagatcatgttcgcgctcacctccatcaagggtgtcggccgcaggttctccaacatcgcctgcaagaaggccgacatcgacatgaacaagagggccggtgagcttacgccggaggagctggagcggctgatgaccgtggtggcgaacccgcggcagttcaaggtgcccgactggttcctcaacaggaagaaggactacaaggacgggaggttctcccaggttgtctccaacgcgctcgacatgaagctcagggatgatcttgagaggctcaagaagatcaggaaccaccgtggtctgaggcactactggggcctccgtgtgcgtgggcagcacaccaagacaaccggaaggaggggtaagactgtcggtgtgtccaagaagcgataa</cdnaseq>

Protein Sequence

<aaseq>MSLIAGEDFQHILRLLNTNVDGKQKIMFALTSIKGVGRRFSNIA CKKADIDMNKRAGELTPEELERLMTVVANPRQFKVPDWFLNRKKDYKDGRFSQVVSNA LDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR</aaseq>

Gene Sequence

<dnaseqindica>1318..1423#465..652#199..360#93..95#ctccgaagccctagctcctcccgccgccgccgccgccgccgccgccgcctctccactcgagagacccagccgccgccgccgccgccgccgccatggtaaccttctcgctcgcttctcctctcctccattcccgtctccgattcgccttctcgtgacgcctcctctgactgactctcgttggcgcttctgtccccgcagtcgctgatcgccggggaggacttccagcacatcctgcgtctgctgaacaccaacgtcgatgggaagcagaagatcatgttcgcgctcacctccatcaagggtgtcggccgcaggttctccaacatcgcctgcaagaaggccgacatcgacatgaacaagaggcaagaacctcctcctcctccttctcgtcgtcagatctcggtaatggtgggtgggtgggtcgggctgacgaccgtcgtgctgtgtccgtggttggggagtgcagggccggtgagcttacgccggaggagctggagcggctgatgaccgtggtggcgaacccgcggcagttcaaggtgcccgactggttcctcaacaggaagaaggactacaaggacgggaggttctcccaggttgtctccaacgcgctcgacatgaagctcagggatgatcttgagaggctcaagaagatcaggtcagtacctcgtctgtcctatctcccccctgcttgccgaattagtactcaacctagtttgatgatggaaccgttttagattaagaactatttttttaatgtcaactcttcacatttagcttttttttgatattagattagatgttccattagttgttgttttcattagttatagaggggttctaagccattgaatgtctgcgtagagactggcaattagtgtacgaagtaatctggattgcttcatggtgaaatgctatgaaatgtggcctatctggtagctaatccagggtatgccagctggattgctttatggtgaaatgctatgaaataaggtggatgaactgtggtttgtgctttatggtgaaattcttgtttagattaactcctggcaagtttttagcaattaggctaggtgataggatcatatttcattgtatttggctgtaaatttagattatatgcttagtctaactgccattatcttgctgcttacctattagcatgaaatggttgttaattatcttagacagtcaggactacagttttcattgtagactgaatggtttgttacccaggcattcatcatgtattggatccctttaacttatgttgaccatcttttacgctctcatcacccttgcgctcacttgttccttgtacaggaaccaccgtggtctgaggcactactggggcctccgtgtgcgtgggcagcacaccaagacaaccggaaggaggggtaagactgtcggtgtgtccaagaagcgataagcctaagaaccacccgagacttgatgaagcgtttcgttgggtgatgttttgccctaggataatattttgcagctatggaaccttgtcgtaatgtatcttgaagagtgtctttgggaactaagagtaatttacttttcttgaaactattgcagtattgactccttgtttattgcttttctccactttcttctacccacttaaaactattgcagtatcgactccttgtttattgctattctccactggcttctgccttaattttggatgttgcatgcgctgtgtatctggttcatgtgatgtaccatggcagcttgatgcattgggattactttgtgctgctattctcattagagaacgcattagtctgatatggtagtttgatctgatgtagtggttaatgataaacttagggttaatgttatggatggtaataactggtaaataaattgtgagattttcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0794700, RefSeq:Os03g0794700