Os03g0808000
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os03g0808000 |
|---|---|
| Description |
Similar to Polygalacturonase B (Fragment) |
| Version |
NM_001058182.1 GI:115456092 GeneID:4334514 |
| Length |
2841 bp |
| Definition |
Oryza sativa Japonica Group Os03g0808000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:34628243..34631083 |
| Sequence Coding Region |
34628243..34628632,34628789..34628959,34629272..34629292,34629407..34629614,34630303..34630493 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:34628243..34631083 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:34628243..34631083 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgtccgtacgcgccctgctcgcgctgacctttctcctgtccggcggcgcagccacggcggcggccgccatggtcagaaatggcggctcgccgagcatctatggcggtggtggtggagagggagctgcagtgatcggtagaggcggcaggtcgctgctgcaggcggcggcggcggcggcggcgacgacgcagagcgcggttttcagcctcgacagctacggcgcgcacggcgacggcgagcgcgacgacacggcggcgctggcgagggcgtggagcgccgcctgcgcctcggcggcgccggccgtcgtgctcgtcccggagagcaggagctacctgctccggcaagtcaccctctccggcccctgcgaatccaccatcaagctcatggtgaaggggacgctggtggcgtcgccggacatgtcgaactggaacgagagcaacaggaggtactggatcgtcgtccgcggcgtcgacgggctcgccgtcggcggcggcggcaccatcgacggcaacggcgaggggtggtgggagaactcctgcaagatcaacagggcactcccatgcaagggagctccaacggcgctgagtttccacacgtgcgacaacctgagcgtgaatggtctgaagatggtgaacagccagcagatccacatgtcagtggaggattgcaccggggtggagctggcccacctgtcaatctctgcgcccggcacgagccccaacacagatggcatccacatcacccacagcaagaacgtccaagtcagcgactgcaccattaagacaggggatgactgtgtgtcgatcgaggatgggacccacggtttacacgtcacgagactggtgtgtgggcccgggcatgggattagcattgggagcttaggagatgacaactccagagctgaggtgtctgacatcttcatcgacaccgtgcacctctatggcaccaccaatggagctcggatcaagacatggcagggagggagtggatacgccaaggatatcgtattccagaacatggtcatgaacagtgtcaagaacccaataatcattgaccaaaactactgcgactcagctaagaaatgcgagacacaggagggatcagcagtggagattagcaatgtggtcttcaagaacatcgcagggacaacaatttccaagagtgccatcactctgaactgcagcaagaactacccatgctatgacatttccttacaggacatcaacctggaaatggtggatgacaatggtgccacaggaagtacttgccagaatgcaaaatggaggaaatctggaacagttgttccacaaccatgcaccagcacaaattag</cdnaseq> |
| Protein Sequence |
<aaseq>MASVRALLALTFLLSGGAATAAAAMVRNGGSPSIYGGGGGEGAA VIGRGGRSLLQAAAAAAATTQSAVFSLDSYGAHGDGERDDTAALARAWSAACASAAPA VVLVPESRSYLLRQVTLSGPCESTIKLMVKGTLVASPDMSNWNESNRRYWIVVRGVDG LAVGGGGTIDGNGEGWWENSCKINRALPCKGAPTALSFHTCDNLSVNGLKMVNSQQIH MSVEDCTGVELAHLSISAPGTSPNTDGIHITHSKNVQVSDCTIKTGDDCVSIEDGTHG LHVTRLVCGPGHGISIGSLGDDNSRAEVSDIFIDTVHLYGTTNGARIKTWQGGSGYAK DIVFQNMVMNSVKNPIIIDQNYCDSAKKCETQEGSAVEISNVVFKNIAGTTISKSAIT LNCSKNYPCYDISLQDINLEMVDDNGATGSTCQNAKWRKSGTVVPQPCTSTN</aaseq> |
| Gene Sequence |
<dnaseqindica>1..390#547..717#1030..1050#1165..1372#2061..2251#2370..2489#2608..2841#atggcgtccgtacgcgccctgctcgcgctgacctttctcctgtccggcggcgcagccacggcggcggccgccatggtcagaaatggcggctcgccgagcatctatggcggtggtggtggagagggagctgcagtgatcggtagaggcggcaggtcgctgctgcaggcggcggcggcggcggcggcgacgacgcagagcgcggttttcagcctcgacagctacggcgcgcacggcgacggcgagcgcgacgacacggcggcgctggcgagggcgtggagcgccgcctgcgcctcggcggcgccggccgtcgtgctcgtcccggagagcaggagctacctgctccggcaagtcaccctctccggcccctgcgaatccaccatcaagctcatggtaaaaaaaattcaaacagaatattagttgattaatcttccatatccagctgcaattcagcttggaactgaagctgattaagtgattaacacggccattaatattaatctttctgaaattagtgtaattctgacgtgatttttggataatatgcaggtgaaggggacgctggtggcgtcgccggacatgtcgaactggaacgagagcaacaggaggtactggatcgtcgtccgcggcgtcgacgggctcgccgtcggcggcggcggcaccatcgacggcaacggcgaggggtggtgggagaactcctgcaagatcaacagggcactcgtaagtgtacttacagtactgatcaagaaattaaattcaagttcaaatcgctatgaattggcttttctagcacgtagataggtggttaattaataaattataactagttctagtaggcgccgtttttcttgatgtgatggtttacttatgcatggcggctgcttcaaattttcgtttgcacgtcgcatggtccttgactttctactcgtgcatttcgtattcaaatatatattcaattcaatttataatttagtcaattgtgatggccacggatctctctaacctagttcatttttcctctgtacttttcagccatgcaagggagctccaacggtacgtgcatgcatgcgaaatgcaatattttttttctcttctttttccaaatttcatttactcaatttttgtagtaccttttaatttgattcattttgtttgtaattaatacaggcgctgagtttccacacgtgcgacaacctgagcgtgaatggtctgaagatggtgaacagccagcagatccacatgtcagtggaggattgcaccggggtggagctggcccacctgtcaatctctgcgcccggcacgagccccaacacagatggcatccacatcacccacagcaagaacgtccaagtcagcgactgcaccattaagacaggtaatgcaactactccctctattttatattataaatcgttttatttttttagtcaaactagtttataaaaaaattagtactcaattgccaaatatagcatctaaaccatcaaaattagtttcattaaatatagcatttaacataattttgtaatatactccctccatccacaaaagttatacctattatttttatcactaagactaataagaaattaatttgtcttggatgttacaaaatcaagaagtaatgcaagcatgcaaccaatgagtatttagaagtctccttggattctaatcaaacattttatttatttatttatttaagtcttgaatgcataaagattacaaataggtgcaacttatttggaaaagctcaaatgtggaatatgtgtaacttttatggagggagggagtatttattttatgttgaaaatattactattttttaaaataaatttgattaaatttaaaaaaaattaactagaaaaaataagtaaaaactatttataatattaaactgagcgagtaatcaattgccaaattaagcacagaaacatgatcaggccttgtttggaaggcccaataattccctgcccataagcttgaataagcccaaaagggtatgtttttttttaatcttcaaaaggatatgactctgattaggtttttgttgttgatctctgcaggggatgactgtgtgtcgatcgaggatgggacccacggtttacacgtcacgagactggtgtgtgggcccgggcatgggattagcattgggagcttaggagatgacaactccagagctgaggtgtctgacatcttcatcgacaccgtgcacctctatggcaccaccaatggagctcggatcaagacatggcaggtaaatatcctcctctcatcctgcagagatttgtgtgaacttactacgaaattttcatcaaaccttttgtatttcaagtgaatctgagagagatagatgtggattttgtcaaatgcagggagggagtggatacgccaaggatatcgtattccagaacatggtcatgaacagtgtcaagaacccaataatcattgaccaaaactactgcgactcagctaagaaatgcgagacacaggaggtaacaaaaacatcaactctcaaaaaccaatcctttatttaacaccagtgagtaatgctcaacaaaaatcatccaaatcacacaattattgcaaatttgccatgaacatggatctcagggatcagcagtggagattagcaatgtggtcttcaagaacatcgcagggacaacaatttccaagagtgccatcactctgaactgcagcaagaactacccatgctatgacatttccttacaggacatcaacctggaaatggtggatgacaatggtgccacaggaagtacttgccagaatgcaaaatggaggaaatctggaacagttgttccacaaccatgcaccagcacaaattag</dnaseqindica> |
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