Os03g0818000

From RiceWiki
Revision as of 19:45, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0818000

Description

Conserved hypothetical protein

Version

NM_001058239.1 GI:115456206 GeneID:4334576

Length

5081 bp

Definition

Oryza sativa Japonica Group Os03g0818000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35178024..35183104

Sequence Coding Region

35178024..35178610,35181441..35181613,35182196..35182380,35183012..35183104

Expression

GEO Profiles:Os03g0818000

Genome Context

<gbrowseImage1> name=NC_008396:35178024..35183104 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35178024..35183104 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcccgccgcggcccgcacgtaatcaagctgcacgactccgccccggcgctgctcggccgcgcgccgatgccgccgccgcctggcccccgagacgagctcccgccgccgtcggccgtgctggtccaccacccacgaggggggctcgcgccccaccccgccgtcgcggcgctcgaggaccggctcgccgtccgcgaccgcgacatccaggagctcctcgtcgacaaccagcggttcgcggccacccacgtcgcgctccagcagcagctcatcgcggcccagcacgagctccgggtggtgtccatcgccgccacgagggcgcgtgccgagcgcgaggatgaggtccgcgcccttgcggagcaggccgcgcgcatagaggccgaggctcgggccgccgtcgccgcgcgcgcggaggtcgaccaggtccacgcggacgttcaggtgctcgccggcgcgcgcactgaactcgtggaccggttgcaggacctccgcgggcagctcgcgcgcttccaggccgaggcgggtaagactgagtccgtccgtgcccaggttgaaaccatgcgccgggagatccagaagggcagggctgcggttgaatttgaaaagaaggcacatgctgataaccttgaacaaagtaaagcaatggagaaaaatatgattgctgtagccagtgagattgagaagctaagaggagatcttgcaaatgctgaaaagcgggccactgctgtcaccgcaacagcacctgtagctaatcctgggttccctacaacatatggcaattctgaggcaacatatccagcacctgcagcatatggtaactctgagacaacatatgcaccaacgtatggtaatactgaggcagcatatgcatcaacatatggaagttctgaggcagcatatgcagcagcatatggaaattctgatgcttatagcactaatcaggctcatacccgcaccgatggcaatcctcattacatggctccacctgttcattatgcgcagtatgacagccagcacaccaatgtgcaaagatga</cdnaseq>

Protein Sequence

<aaseq>MAARRGPHVIKLHDSAPALLGRAPMPPPPGPRDELPPPSAVLVH HPRGGLAPHPAVAALEDRLAVRDRDIQELLVDNQRFAATHVALQQQLIAAQHELRVVS IAATRARAEREDEVRALAEQAARIEAEARAAVAARAEVDQVHADVQVLAGARTELVDR LQDLRGQLARFQAEAGKTESVRAQVETMRREIQKGRAAVEFEKKAHADNLEQSKAMEK NMIAVASEIEKLRGDLANAEKRATAVTATAPVANPGFPTTYGNSEATYPAPAAYGNSE TTYAPTYGNTEAAYASTYGSSEAAYAAAYGNSDAYSTNQAHTRTDGNPHYMAPPVHYA QYDSQHTNVQR</aaseq>

Gene Sequence

<dnaseqindica>1..587#3418..3590#4173..4357#4989..5081#atggccgcccgccgcggcccgcacgtaatcaagctgcacgactccgccccggcgctgctcggccgcgcgccgatgccgccgccgcctggcccccgagacgagctcccgccgccgtcggccgtgctggtccaccacccacgaggggggctcgcgccccaccccgccgtcgcggcgctcgaggaccggctcgccgtccgcgaccgcgacatccaggagctcctcgtcgacaaccagcggttcgcggccacccacgtcgcgctccagcagcagctcatcgcggcccagcacgagctccgggtggtgtccatcgccgccacgagggcgcgtgccgagcgcgaggatgaggtccgcgcccttgcggagcaggccgcgcgcatagaggccgaggctcgggccgccgtcgccgcgcgcgcggaggtcgaccaggtccacgcggacgttcaggtgctcgccggcgcgcgcactgaactcgtggaccggttgcaggacctccgcgggcagctcgcgcgcttccaggccgaggcgggtaagactgagtccgtccgtgcccaggttgaaaccatgcgccgggagatccagaagggcaggtattctgttggtttatctcaacccccagttttaatgctaccatttcaacactaaatgtctgcttggattattcgtgatttcgtgtttacattttgtgaatgcacatgagtgttccatctcatgcattgcaaggaagaaattgtgcacttcatagcttaactttaggcctgatgaggataatgtttcacagagttggcgtgagcccgtgacttgagcacattgcttaagcgagttgtgttctttgttagtcaatcgagctgcttagagcttctacattttagcaagtcagtttgtgtttagttagagtaggttgatgatgcctcagaatttcacttagacatgtagcctgtttagatgctagtatatttgatcaatctggttttccagaacctttcgatttctgcttgcttatgtttgtatgagtccaaacctgtggcctatacatgatcacagtactgtgtttctttgtccagcaaattgctagctctatatggcactgttgtcattttaagcataattgaagtgtattagataggatgtccagggtgagttgttgaacatgctttgctcatgatttagctggagactagaaatcacttctatttcacatgttatcagcagtagttattttcacaaaaaatattcacatatacctgactaagtccagatagtctaggcctaggaataggattcttgctaagggtgttaattctgataagcctagtttccatggatatgccactgcatcggcgcttccacgcacaattcttaactcttagtcacaacactttcaagttcgaaattactaaaatgagctttgctcatcataaggcataaattataatattgtatgctggcagatgattctttgatgattggagtggtaatgtactgcccttgaaagatgaaggtggtgagaactacctattgctttcaagcactcccagctagtgttctaaaaagtggtcgtgcagccgcttaaatatggatggccatatcccatccatgcatgaccatgaaccaaacacaccctaagtgtacaaggttgccaaacctttctgagtattgtaatcgcttcgttttcaaggcttatgatgttaagtgggcagcacatgcggatatgcaacccatttaccgcatacaaggccgattaaggatgtatttggttggagggattagagtgtataggatgcgatagtacatgatacaactcagttatttgcttagaggtatggaaacgtacaacagtttgtctggttacttgtatgatatgggatggtatcgtacgggaattcgtttggtaggatgaatgaatttgatttggtaatacaaattaaccccatacagtaatgagctccatcttttgcctttcagcttattagccgttgccaaaatttgaattttaaaacttaatttgagagtttattttgaggttttttcatcgtagtttatttttcagcattggttttaaatcgctaaggacacacatataaaagttttacccacaaaattatttttgattgctgataagccattatggcttataatcagcatatgccaaacgatgggactgattatttccttttcatctatcttgtcattgcattttttttccttttttttcttaagcttcagagatcagctattaatgatgtgttgggttttcacttttgattagtccagatgtctgcctcctcctcctaggcaatgcagctagtccaccagcgaatgtttgggtgaacactgtcccgtacggcattatttttgattttttgtcgaacaagaccatccaggattttgagataatattctctaaagttggatcctaccatcccagacggattgatttggttcatccaaccaaacactgcgatcagccgaatccttgattgatcctatccatcttgaccttcacgtatcaaatggcccatgtacttttgtatgactttcatcctataaacctatgttcattgttcacacagaaagatgggttagatggtaatattgtattgtattagtgtataaaaatgcatatgtatgttcaatatatgtgtgtgtatatacttcacattttagattaaaaaaacccttaaaaccacttacaaggtcgctttccgcttaagcactacaagttgtagtgaccgcaccacaccgcttaccgcttttagaaccttgctcccagctgatgcagaattctggtgtagggttgttggatcatttaggacgtgtcttgagccccaattctggtactaccttttcacacattcacaaagctcaccagtcagcaagctttctctgagatattttatgtcatttgaacaatgccaatgcattgtgatggttctcaaataaatacaccggaagttctgagtttaagaaaagaaaaagaaaaccctctagtctagataatttcccaaatggcctcggttaggggatttccaggtaaggatcatagtgtgtagctgaggctggtgggatgggagggagggagtcctgctctcaagcttgtggagaagccatgatggctggcacaccagccgtgtggggcacaccctttgctgtgcgcctaccactgtaggtgtggacccacatgacgcaaatatagatatatcatattaatcagcgactacatctgcacatgtgcaaataaggcagtactttaccaaaagatcccaattaacacatacaggtctatataaatccacccacaaattatcctaattgactggcatagaatgcgccatcaccaccaccaactcctttttaagcagtacaggtccagatctatggataagctattttctctaaggatcttttaaattttggcagggctgcggttgaatttgaaaagaaggcacatgctgataaccttgaacaaagtaaagcaatggagaaaaatatgattgctgtagccagtgagattgagaagctaagaggagatcttgcaaatgctgaaaagcgggccactgctgtcaccgcaacagcacctgtagctaatcctggtattgcactggatctcaggagtctattgtcacttcccttttctgtgtaatcggggtgggtagccttaaattattatattcccagttttttgcatagccttttttaatagattacaattactgaacccaatggcaaatgtgaaagtttcgttcataaaattgctagttagggagacatcatgggattgcagcatttgcttttagtagtcaattagtcaatttgcagttgatgccctccattctgaaatataggtacttagttacttgtgggaatctatacccagtccaattagacaatttcctgccatggctaacaaagctcctttcaaccatatagaaacctgtaaaggcattggtatttggtaagagtgttaacttgcaagggtgattggttgggagaggtttagaagcatagcataaaagccactatccatgtctcttagcttctttcaataggtaggcttgaacttctcaaaaagttgtatggagatatttggctggacactattgaattgtcactctgaattgcattgatttgattgtatcattattttgaattggttctttcatatcctatttcagggttccctacaacatatggcaattctgaggcaacatatccagcacctgcagcatatggtaactctgagacaacatatgcaccaacgtatggtaatactgaggcagcatatgcatcaacatatggaagttctgaggcagcatatgcagcagcatatggaaattctgatgcttatagcactaatcaggttggttacattcccttatcattgttctcttgtttcatttctggtgtcaagtatatctttttgctttcattgttatgcatgtcaaaggatacgcactcaaggactgaaatccattattacttgaacagatgtattttagttagtagtttgaatatttgctcctctttttatttcactgttggtcttgaaatgattcgttgtgccatgtattgtttctgaagttttccacccctccataaggaattcaacgaaatatgtctttttagtgaaggaaaacatggatggtagcccattgtattctataacctataggtgtaactcttttacatcttcccctgtcaacgtcaacagcattaggtatttacaagctacattttgtggtctatgctataggttaattagtatgggtaccacttgctctaaactgtaaagtgtaaacatatgctctgttctattagggactaatagttcctggtgagggaaaaccattaaagcttctctcccttaattgttggatcatgggtgtattttgaatttggtttctgttccaggcttgaaaataccaaattatgctccaacttcctagtgcctctatatattattagtgattgctgtgtcttctttatcacaggctcatacccgcaccgatggcaatcctcattacatggctccacctgttcattatgcgcagtatgacagccagcacaccaatgtgcaaagatga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0818000, RefSeq:Os03g0818000