Os04g0373000

From RiceWiki
Revision as of 19:51, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0373000

Description

Protein of unknown function DUF803 family protein

Version

NM_001059107.2 GI:297602567 GeneID:4335601

Length

2861 bp

Definition

Oryza sativa Japonica Group Os04g0373000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:18211656..18214516

Sequence Coding Region

18211656..18211782,18211946..18212002,18212182..18212272,18212357..18212517,18212988..18213115
,18213198..18213335,18213778..18213870,18214358..18214516

Expression

GEO Profiles:Os04g0373000

Genome Context

<gbrowseImage1> name=NC_008397:18211656..18214516 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:18211656..18214516 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgatgtctatagacaatgtgaggggctttgcactggccacatcatcaagtgcatttattggttcaagctttgtgattaagaagattgggttgaagaaagctggggatgctggggtaagagcaggttctggaggatactcatatttatatgaacctttatggtggatagggatgacagctatgattcttggtgaggtggccaacttcgcagcatatgcatttgctcctgcaatacttgtcactcctctaggagcgctgagcatcatattcagtgcagtgctagcacactttattttgaaggagaggttgcatatgtttggtattgttggttgcatattatgcgttgttggttcagttggtatagttctacatgctccaaaggagaaaaagatcgattcagttaacgaaatatggcatcttgcaactcaaccaggtttcatagtctattcttgcatggcagtagttgttgcacttattttgattttctgggtcgttcatcggacggaacaaaggaaaatgctcgcatatattgcaatctgttctctgatgggatctcttacggttatcagtgtaaaagcagtggctattgccttgaagctttcatttaatggagtgaaccaatttatctacgtcccaacctggttctttattgttgtggtggttatatgctgtttagtgcagttgaattacttgaacaaggcccttgattcattcaacacagctgttgtctctccagtctattatgtgatgttcaccattcttactattattgccaacatgatcatgtacaaggactgggcctctcagaatgcaacgcagatagcaaccgagctttgtgggtttgtgacaattgttgcaggaacttttcttctgcacaagaccagagatatgggaaacgaacaatctgaatcatcttcactgagaggagaatgtgaactccagaatcattag</cdnaseq>

Protein Sequence

<aaseq>MVMSIDNVRGFALATSSSAFIGSSFVIKKIGLKKAGDAGVRAGS GGYSYLYEPLWWIGMTAMILGEVANFAAYAFAPAILVTPLGALSIIFSAVLAHFILKE RLHMFGIVGCILCVVGSVGIVLHAPKEKKIDSVNEIWHLATQPGFIVYSCMAVVVALI LIFWVVHRTEQRKMLAYIAICSLMGSLTVISVKAVAIALKLSFNGVNQFIYVPTWFFI VVVVICCLVQLNYLNKALDSFNTAVVSPVYYVMFTILTIIANMIMYKDWASQNATQIA TELCGFVTIVAGTFLLHKTRDMGNEQSESSSLRGECELQNH</aaseq>

Gene Sequence

<dnaseqindica>1..127#291..347#527..617#702..862#1333..1460#1543..1680#2123..2215#2703..2861#atggtgatgtctatagacaatgtgaggggctttgcactggccacatcatcaagtgcatttattggttcaagctttgtgattaagaagattgggttgaagaaagctggggatgctggggtaagagcaggttgtgcctcctcttgtttctggttaaataattcattttctacattgcatagaaggttttttcttaaaagaatgctcaaatcccttgtcctgcagttatgtttcaagtagaatgtacataggttctttcattataatccattattgatccttatgatttgcaggttctggaggatactcatatttatatgaacctttatggtggatagggatgacagctagtaagtatggattacattgtgctcttttctgttgataatgcgtggcaaagaaggcattctcagtctaatccagtttccttttgttatatgatactccatatttatggaaataatttattggaactactgaggtagcttctacgtaagttcacactacagattttatctctctgttacagtgattcttggtgaggtggccaacttcgcagcatatgcatttgctcctgcaatacttgtcactcctctaggagcgctgagcatcatattcaggttttacacatatctttgcgtctaggaaataattttgattaatcagtagtatgttgtttccttaacactcttttattcattcagtgcagtgctagcacactttattttgaaggagaggttgcatatgtttggtattgttggttgcatattatgcgttgttggttcagttggtatagttctacatgctccaaaggagaaaaagatcgattcagttaacgaaatatggcatcttgcaactcaaccaggtagctcttatctcaaaggtcttcaacagttgttctagttgtcatttcagtagatatagctgtattgtttacctttggagaaagttttaattttgtatttgtgttttaatataataatccgttttattctcaattttgccatcagtgctgacctgctgatctgaaatgtaacttggcaaacaagagaagcagtattattttgcaatttttgaagagttctatctaagagtctatttgcatccttaagcatgttggcttctcaatttttttttggttgatacacataagaaaatgatgctcaaagaatcagtttcttgagaattttcacttgcatgactgtcattcattatgctgagatttttccatcattctaccagaattagtacttgtggttatattctataggttagggatactacttgccttcccaaaattcattttgatgcataagtgtaacattgtgcttgcaggtttcatagtctattcttgcatggcagtagttgttgcacttattttgattttctgggtcgttcatcggacggaacaaaggaaaatgctcgcatatattgcaatctgttctctgatgggatctcttacggtaggctcgctatgcatcataactgaactgtttgaatcaagttgatccattatgttctgataaagtaatatacttgaggcaggttatcagtgtaaaagcagtggctattgccttgaagctttcatttaatggagtgaaccaatttatctacgtcccaacctggttctttattgttgtggtggttatatgctgtttagtgcagttgaattacttgaacaaggtaaccggtcacatcttaaggaaacattcagcagttttttacttgatgggatcaccgcttttctcatagatattattgttgttactatctatttattttggttgtggctcaacatgggtttcatctctagcctactccaatgtaattgggtcttccattcagaaaaataaatgcttgagagttgaggctgttacatagcttacatgaatgatttatttcaacaacatacatcttgtcttgtcgtaaaatattatttacttcacactgaatcttttgcattgacatacttcactgtagagtcttagcacctagatttctttaattttacattttctaataatttaaatcttttttctggcattgtgagtcctgcatattgacatcaatattgtctttttccctttatcttttttatttgaacattttttttttgttattgtaggcccttgattcattcaacacagctgttgtctctccagtctattatgtgatgttcaccattcttactattattgccaacatgatcatgtacaaggtgatttccacatcgttcatacctttcgttagttcatgtgatatttctatattaaaccactttcctatttgatgaaacctagacttgaaaattcaatatgtgtttcttgagactttattctggggaagctatatatggcatcatcttaaaatttgctgtgtaaaactaaaattttagcatccgttgtaagctggtgtattcatgtctagtatggcattgttgggcaagaaatttttttcatgccagtatgcatgacaattcagtattcataaaaggggcctctgcgtcgagattcttgtcgctactgaacttgtactaatttttttaacttgactcgaaaaactaatatttgaattatgcatgatattccattgttcatcttccgccattcgatactaaacatttccgataggtgctaacccattgttaatgtgacttttttggagattgacaaacatatttgatggtccctaaattttcattccaggactgggcctctcagaatgcaacgcagatagcaaccgagctttgtgggtttgtgacaattgttgcaggaacttttcttctgcacaagaccagagatatgggaaacgaacaatctgaatcatcttcactgagaggagaatgtgaactccagaatcattag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0373000, RefSeq:Os04g0373000