Os04g0452400
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os04g0452400 |
|---|---|
| Description |
Similar to Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15) (Ubiquitin- specific processing protease 4) (AtUBP4) |
| Version |
NM_001059486.1 GI:115458701 GeneID:4336009 |
| Length |
6006 bp |
| Definition |
Oryza sativa Japonica Group Os04g0452400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:22966095..22972100 |
| Sequence Coding Region |
22966366..22966762,22967061..22967242,22967332..22967517,22967839..22967937,22970078..22970194 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:22966095..22972100 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:22966095..22972100 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggtcatgggagccagcggctccaagctcgagaaggccctcggcgaccagttcccggaaggcgagcgctacttcggcctcgagaacttcggcaacacctgctactgcaacagtgtcctccaggcactatatttctgcatcccgttcagggagaaattgctggaatattatgcaaataacaaaactcctggagatgcggaggagaaccttttgacttgtttggcggatcttttcatgcaggtaagccagtcaaagaaaaagactggcgttattgctccaaaacgctttgtccaaagagtaaagaaacagaatgaactatttcgcagctacatgcaccaggatgcacatgagttcttaaattttctgttgaatgagcttgttgatattctggaaaaggagtctaatgctgcgaaggactcccctcaatcatcatctcctgaaaaggttccaaacgggccagttcaacctttagccaatggtgttagaaaagaaccaccggttaccttggtgcataagaattttcagggcatactgaccaatgagaccagatgcttaagatgcgagacagtaacagcaagggatgaaacattttttgatctgagtgttgatattgagcagaatagttctatcacaagctgcttgaaaaacttctgctccacggagactttaaatgctgaggacaaattcttctgtgacaaatgctgcagcttgcaagaagcacagaagagaatgaagatcaagaaggctccacacatattagttatccacctaaagcgcttcaagtacatagagcagcttggtcggtataagaagctttcataccgggttgtattcccaatggagctgaagctcagtacatctgatgatgtagataccgagtactccctctttgctgtcgttgtccatgttggaagtggccccaaccatggacattatgtaagccttgtcaaaagccacaaccactggttgttcttcgatgatgaaaatgtcgagatggttgaggagtcgaccctgcaaacattcttcggttcttcacatgaatactcaggcaacacggaccatggatacatcttgttttatgagggtcttggtgggaagagttag</cdnaseq> |
| Protein Sequence |
<aaseq>MVMGASGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALY FCIPFREKLLEYYANNKTPGDAEENLLTCLADLFMQVSQSKKKTGVIAPKRFVQRVKK QNELFRSYMHQDAHEFLNFLLNELVDILEKESNAAKDSPQSSSPEKVPNGPVQPLANG VRKEPPVTLVHKNFQGILTNETRCLRCETVTARDETFFDLSVDIEQNSSITSCLKNFC STETLNAEDKFFCDKCCSLQEAQKRMKIKKAPHILVIHLKRFKYIEQLGRYKKLSYRV VFPMELKLSTSDDVDTEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMVE ESTLQTFFGSSHEYSGNTDHGYILFYEGLGGKS</aaseq> |
| Gene Sequence |
<dnaseqindica>5339..5735#4859..5040#4584..4769#4164..4262#1907..2023#360..482#agggtagtagactagtagtaggcgaaagaaaaaaaaaatccccccaaacgagagaagcggcagcgacgacgacgacgacggcgacagcagcagcggcggcagaagcagcagaagcaaccccctcctccgccgctccgccccatcggatcgaggccgccctagggtttcccccaggctccgcccctccgcttcccccctctccgccgcgcgcgcgcggggagccaccaaaccctaggacggcaaacccggcgcgatcgcccacggtggaggcctcgtcggcggccgagaggagccgctccgggctcgggtcggggttccggtacctcaccggcgccgcctccgggtggtgggaccggtggatggtcatgggagccagcggctccaagctcgagaaggccctcggcgaccagttcccggaaggcgagcgctacttcggcctcgagaacttcggcaacacctgctactgcaacagtgtcctccaggtctctatccccctagccctcacgcctccgtagcttgtggattttctgtgactgaacgcgcggtatgctcggtgtgattctggggattgtgatgagcgttctatgttgtagtatcgtagtataagtagcttgattcagtgccttacatgctttgagttttgattgggtggtttgttcgataacctttgtgctgcctttgattgttccagttgacttgtgtaggttcctaatcatgtatttatgttactgtaatagatgattagtacattagagtttgtgtgcttttttttttgcgaaatgtgttgttatgggtagaatatgtcaattctgcagtaatacaagctgttgtgagttgtgcggcatgtatattagcactatgcttgcatggttaaatggttagcttcatcttatatagagatgtaaagaatgctgggttccagtcgttctgtatgttgaccgtcctgccaatagcttcatatttttggaatgcaagtattagtttctctctattagcacccatgtatgtaagtagctctagaattgaatgtggtagacatatatgggtgtggtggcccgaaatttagaatcaatgtgttcatctgaatagtattcaaagttatctggttccagttatctgaacagactttgttatgcaagaattaagttagaacttataagtctagcaatatacaacgtgctttcatttatctggttccagtttgaatcgtctgctcatctgtatgtggcattgccgtgacaacttttatgcctttaatctgaagctcttagtatatgagtacaattcaataagatctgtatgtgagaagaaagctttgaatatttcaattaagtaactggtaatggcaccagtgggttgaaaacattgtagggtgtatttgacaaatgcaggatcactttctgcccattttcttttagaatggaagtttgaggcatttcctagcagttaaagctataggacatttctgacaatacttttacccacttctgaatattcgttttatttgattgaggatcttgttaggacacataattttgtctgttctgttgtggatcgttatccttattgtgcgagaaacccacaggagacaattttagtgttcactatcttagtaccttcgctatagttgtagatctaccttatatttgtaaagttctgtgcataatattgtagttgtcatgaaatatgatgaacaagtttatattttattatatcttggtatgcaatagtcaaataatgttatcattcctgaaccatattaaattatggactatttctgtttggtaaatgttctgctgtaatctcttcttcacagtttgcaatcttacaacttgcactgcacagtcaattattttttatacaccttattatttacatgaaccttacaatgatacttgtgttccaggcactatatttctgcatcccgttcagggagaaattgctggaatattatgcaaataacaaaactcctggagatgcggaggagaaccttttgacttgtttggcggatcttttcatgcaggtaaagtggacaaagtataagtttcttacttgatgataatgatatgtaactgtgtttgagcatattgttgctttcaaaaactttgaatgggtaacagcttcttcataactgttcttcattgcattcagtggaactttcatctaccaagtattatatttctgattgttaaggacaatagtacgctgatgttttagttgaagtaggattgtaaccatgatgctagttggtaggccctatttgcttggggacttactccctccgtcccaaaaaaaaggcaaaccgtgggtttccgtgccaacgtttgactgtccgtcttatatgaattttttttataattagtattttcattattgttagatcataaaacatgattaatactttatgcgtgacttatctttttaatttttttcataattttttcaaataagacggacggtcaaacgttgggcacggaaaccagggtttgtctttttttgggacggagggagtattagcctgcttataatctaaatacctaaacctaagcaaacagaaagtttttttattcggctttttttaaaagccataagccactgttgcaccaacaagccaaatgctagatttgagtagcccttttggcttttgtgggttggtgttatccctccacccttatacttgtggattaaaagctatggccttgcagactacaaatttcaaatagctagattaagagcttatgctgaaaaaagtggtgggtcttaggctcattcctgggagaagaatatcagaatatggtaagtcctattctatattatgtaaaggccttaagttttagtaatgccttacagggtggcatcaagtgacttgtatctgctgtgcagcctttaaaatatctgttccctctcttcaggatgacacgatgctgtaactgtagtagacagaagcatgcaaagtatttttattttcattctaacagttctcaagaacaaatgtttttgttacgacaatttaagaacttatattgtcctattgattatgcttctgcaataaggggttatctgtaatggcatgttttagttgtagtggatgtcgtggtgttgtcatgccgatgacagggtgtcaagtcagttgaaagcaatcagtactcaatattattcccagaccattcaccctgagtccttgatttgaggtgagaagaccctttaaaggatagataatcacaaagaaataaacagttctagcagaggtctaggagatagggatctctgatctggcttctgtggtttctctctgtgctgctgcttaatctctgaggagaacctggtggacgtggaagaagttgtggaggcattagggggtagcagtatggcagaggaaagaaggataggtcataggtcaggaaagtagtgaagactgctacctggtgttggtgtgagtggaagcctggcaatatcaggacatgagattacgtaggtagtgaggtagctggccgtctcacatattatccccctcctgctatttgtgtgctccatgtgttgattagggtgccagcttttgtttagcaccctcatccattgaagtcatcatataatcgctgccagggtgaagtttcgtatgttgccagttaataaatctctattgcactgagtttgaaggttttacgtcatcgtgtgttgatcagagaattatgatggaagccacttgatagcactgtgcagctccatatgagatatatttgttgtctgtgtgctattttcttgtttgggtatcttgaggtgatttttctagtcttcagagagtgcactgtttattggaagccacttgatagcactatgcagatatatttgttgtctgtgtgctatttatttgtttgggttttcttggggtgatttttctagtcttcagagagtgcactgtttattggaagacttatatcaacttacttagagtaatgtacactgacctgctgttacaatcagcatatattctaaaatccatcacacaagttgattaccaaataagatatttggcttgatgtcgtacccacaaattcattgatctgtgtgcattatgtttactgctcggttttgtatggtctctgaaatttctgtcaggatattgtctctgtcagcaacttaatggatcataatatatattgcaggtaagccagtcaaagaaaaagactggcgttattgctccaaaacgctttgtccaaagagtaaagaaacagaatgaactatttcgcagctacatgcaccaggtaccttgcatgtattattatagtagtacaatttgttgatttgtgaagcattgtgatgacattgtcacgttcacacaatataagagcacattttcatctgctataatttgaagcttcatgctgaccaaattgatgcaatttaatacaaactccataatcgttttttactttcaaatgttccatttattaattggtctgagtgatgtcattttcattattggtatagttggcatttaaagctgacaattgattttgttggagaaaagataattgtgtttgtattcactaataataatttacccttccatgattactgtgtaggatgcacatgagttcttaaattttctgttgaatgagcttgttgatattctggaaaaggagtctaatgctgcgaaggactcccctcaatcatcatctcctgaaaaggttccaaacgggccagttcaacctttagccaatggtgttagaaaagaaccaccggttaccttggtgcataagaattttcaggtgactgaactctctgaaaataccttgcagctttccacccttaaagagctcgggtcattgtcatcttatttttctcgtaacatgtgtagggcatactgaccaatgagaccagatgcttaagatgcgagacagtaacagcaagggatgaaacattttttgatctgagtgttgatattgagcagaatagttctatcacaagctgcttgaaaaacttctgctccacggagactttaaatgctgaggacaaattcttctgtgacaaatgctgcaggtacaactatgtattatatttattttacactgcattttcttttcttcacaatgcagcaagaattctttgaactattgatttgttttcataatgtgccatttccatctttgcttggtgagcactgtttggtatatgtgcacaacagcgcaaagccctgactggtcacctttcctttgaagaacctgttatatgctgtagactttgggtgaaacagatgaaaattgtgtgctttaactaccatatgggaaggcttgtaatcttaactatgctgagctccaatattttgatcttgttacagcttgcaagaagcacagaagagaatgaagatcaagaaggctccacacatattagttatccacctaaagcgcttcaagtacatagagcagcttggtcggtataagaagctttcataccgggttgtattcccaatggagctgaagctcagtacatctgatgatgtagataccgagtactccctctttgctgtcgttgtccatgttggaagtggccccaaccatggacattatgtaagccttgtcaaaagccacaaccactggttgttcttcgatgatgaaaatgtcgagatggttgaggagtcgaccctgcaaacattcttcggttcttcacatgaatactcaggcaacacggaccatggatacatcttgttttatgagggtcttggtgggaagagttagattgattttcttcaccttccctgttcttttcttttttttttctttggagcatgcaagaataccgttgtatttacacagctatttcattacctccatggaaaattgttgatctcagagattgtgagtatgaacatgaggacgctggattttgggtggttttagtgtacagagcataatggaaccttgctcctagtggtgaaataaggtgtaaatcattaagtacgcctgacttttttttttcgtcagcattgacatctttaccaaagaatgc</dnaseqindica> 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