Os04g0541500

From RiceWiki
Revision as of 19:56, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0541500

Description

Diacylglycerol kinase, catalytic region domain containing protein

Version

NM_001059980.1 GI:115459689 GeneID:4336541

Length

7258 bp

Definition

Oryza sativa Japonica Group Os04g0541500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27509752..27517009

Sequence Coding Region

27511689..27512096,27512194..27512550,27513663..27513756,27513852..27513889,27513974..27514120
,27514288..27514387,27515122..27516074,27516633..27516782

Expression

GEO Profiles:Os04g0541500

Genome Context

<gbrowseImage1> name=NC_008397:27509752..27517009 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:27509752..27517009 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagtagctgatctagaaaatcctacttccagaagctcatcccagaagtccagtcggcggtctggtagtcggcgttctcaaaagtcagccgggcaacaatcttcaccaactgtatttccagagaaaaaaggcaaatcaaaatcttcgaggcagaaacacttggtttttgacaataaagattccaagaaagcaaaaaataatgagcaaaaaaatgatgtggtggatgagaagtctaatttctcaggttatgaaatctattctggaaaactcttttttgacaagaaaaatagaattacaggagatcaaatttcagcaaatgggaaagctgatataagtgatgtaagactcacaagtaaagccctaatatggggttcttctttactcagtcttgaggatgtcatctctgtatcttacagttctggtgtccaacatttcattgtgcatgcatacccttctaagaagtatttgtttggaaagacacacagagtacggaaggacctccggtttatagcccctactgtagaggaggccatttcatgggtaacatgctttgccgaacaaaacatatatgttaacatgctacctctccctccaacatccagtaccgagcaagaccttgatggtcccctcagtggtgctttatttgaccacccacccatcaaatgtagaactccaccgaggatacttgttatactgaaccctcggtctgggcatggtagatcatgcaaagttttccatgacaaagcagaacctatttttaagcttgcaggttttcacatggaagtggttaaaactactcatgctggtcacgctaaatctcttgcatctacatttgattttagcgcattccctgatggaatcgtgtgtgtaggtggtgatggaattgtaaatgaggtcttcaacggtctactcagtagaagtgatagagcagaggctgtatcaattccagttggaataatcccagcaggatctgacaattcacttgtttggactgttttgggagttaaagatccaatttcagcatcattactaattgtgaagggtggctttactgccctagacatcctgtctgttgagtggatccagtctgggctaatacactttgggacaactgtttcatactatggttttatcagtgatgtcctggagctttctgagaaatatcaaaagaaatttggccctcttcgatattttgtggctggaatactcaaatttttttgcctgccaagctatttctatgagttagagtatcttccttcttcaaaggagatgactggccatggaaaaggtataggacaagaaaactttgtgtctgatgtatataccaatgtaatgcgcagccgatcaaaaagagaaggaattccacgagcttccagtttgtcaagtattgactctattatgactccaagtcggatgtcacttggggacgttgatacatcaggtagcacagcagcaagcactgaaccttcagagtatgttcgtggtcttgatccaaaagcaaaacgcctttctttgggcagaagcaacattgtttcagaaccagaggaagttttacaccctcaaccacatcattcatcattctggccaagaaccaggtccaaaacaagaactgagagaaattcagttggtgtcactactaacgatacacgattatcttgggcagccccatcaattcatgacaaggaggacatttcctcaacaatttcagatccaggacctatttgggactctgaaccaaagtgggacaatgggccaaaatgggatacagagctaacctgggagtctgaccaccctattgaactccctggaccaccagaagacaatgaaattggaccatcagtggaacttgtgccaaatttggatgataaatgggtagtcaggaaaggacactttcttggtgttctagtttgcaatcattcatgcaagacagtgcaaagtttgagttcgcaggttattgcaccaaaagccaaccatgatgacaacactttggacttgctcttagttggtggaaagggtagatggaagttgttgaaatttttcatacttctgcaatttggtcgccatctttctttgccttatgtggaatatgtgaaggtaaagtctgtcaagcttaaaccaggtgcaaacacgcacaatgggtgtggaatagacggtgagctttgccgcgtcaagggacatgtactctgctccctgttacaagagcaatgcatgcttattggccggcaaagcagacaatctacttaa</cdnaseq>

Protein Sequence

<aaseq>MEVADLENPTSRSSSQKSSRRSGSRRSQKSAGQQSSPTVFPEKK GKSKSSRQKHLVFDNKDSKKAKNNEQKNDVVDEKSNFSGYEIYSGKLFFDKKNRITGD QISANGKADISDVRLTSKALIWGSSLLSLEDVISVSYSSGVQHFIVHAYPSKKYLFGK THRVRKDLRFIAPTVEEAISWVTCFAEQNIYVNMLPLPPTSSTEQDLDGPLSGALFDH PPIKCRTPPRILVILNPRSGHGRSCKVFHDKAEPIFKLAGFHMEVVKTTHAGHAKSLA STFDFSAFPDGIVCVGGDGIVNEVFNGLLSRSDRAEAVSIPVGIIPAGSDNSLVWTVL GVKDPISASLLIVKGGFTALDILSVEWIQSGLIHFGTTVSYYGFISDVLELSEKYQKK FGPLRYFVAGILKFFCLPSYFYELEYLPSSKEMTGHGKGIGQENFVSDVYTNVMRSRS KREGIPRASSLSSIDSIMTPSRMSLGDVDTSGSTAASTEPSEYVRGLDPKAKRLSLGR SNIVSEPEEVLHPQPHHSSFWPRTRSKTRTERNSVGVTTNDTRLSWAAPSIHDKEDIS STISDPGPIWDSEPKWDNGPKWDTELTWESDHPIELPGPPEDNEIGPSVELVPNLDDK WVVRKGHFLGVLVCNHSCKTVQSLSSQVIAPKANHDDNTLDLLLVGGKGRWKLLKFFI LLQFGRHLSLPYVEYVKVKSVKLKPGANTHNGCGIDGELCRVKGHVLCSLLQEQCMLI GRQSRQST</aaseq>

Gene Sequence

<dnaseqindica>1938..2345#2443..2799#3912..4005#4101..4138#4223..4369#4537..4636#5371..6323#6882..7031#gctccaaacacaggaaaaccagtgcgcggaggggagaagagaaacgagcggagcaaagaaagaacagaggaaacggcggcaccgtccctttctttccactggcttctctcccctcaacaacaacaacaacaacagcgcagccggaacagcgccgcctcgtgtccgccacgccattttttttcttctcctcctcttcctcgtctcctcagctgaaaacgcgcacgccaaaacccatcgaaccaccaccccggccctccctcacccgtcgcccacccaatcaacccctccacggctccaccacaccgccgcgtccgcgtcctcctcctcctaccaccaccaccgcctcgcctcctgccccgccgtcaaccgcgagagctcgcgccgccggccgacgtgagtccggaggcgttcgatctgctgccggcggcggggtggaccgagggccgcgtcctcagctggttccgcctcccgatccgatcgtttccagtgggggggcgccgaattcggtacgtctcgttgggtggcttcgatccgcctgatggtgctccctctcttcgtgaggtttcaatctccgtgttaggtgggcggtggctagctgattggattgctcgtcgtgtttctccctttcgccttcgcaatccgattggtgcgccgggcgtttggcattcgaaattatgctaatcgagatctgtggtgcccgtagttcgtagttgctattcctgcgctaagacttccatattcgtgattgcgtttctccttactgaaccaaacaatttagacttctatactcatctataaacacattttattatttgtatttctggagatctgttgctggtatcacctatatgctcgtctttgcacttctcactgtactgcactagaataactgttttctgtattgtgcaactcatcatttgattgctgacgcttgagagttcagcggtacatgctattttatagtgctcatacagtctacttggtacttgcaattatcggggaactgattgctgttagcgtttatatacctatatgttttcgctgtaggctattaagcattttagaactatgtttgagggctcaaccgattaatttgtgaaatagtttagcctatgttcctgctgtaagtgtccctataagtgtccaggtgtttccctataaaagaagtcaagtgaattgtagcaccatagcctctgtgatgactcatcttaatgccgtcttctagagcatggcagtgaactggagcacttcctccgacccagaatagcatgtccagagtcgtagtactaggatgtgtcacatcttgtactagattaacttattattatggaactgagggagtagtttgatatagcacatcatatcagcttccaacaattgacgattgcagtccttagggtagtggctcaaattcaacacatgaatacaaatgttagtagttgatatgtcccaagtaggcatgcacacagttaaacatggagcaaaagttcttttgttagattcgtcacaaggtttcctcgcacatatttgaacatcaggctcatatgataggaaatcaccatataaatatttaaatattatcagaattttatttgctaaagaaatgcttcaaactttcagtacgacaaacttttgaggacctttttctttagacccaagctgtttaggtgctagccttttgtgactaccttcttagttatctgtggagatgaagctcggatgtactcattttttctgaacggctgcttttggtcaacaaatgatgcacatgtaccagccagatggatcttataggtgttctgttttcctttcggtgcaggctatttttagttgttagcaactttgacatggcattgatgccatgatcatacacctatgaggtcatgccaaattcctgatctatactgatgctctgaagtcctctttaaaagaaagagatggaagtagctgatctagaaaatcctacttccagaagctcatcccagaagtccagtcggcggtctggtagtcggcgttctcaaaagtcagccgggcaacaatcttcaccaactgtatttccagagaaaaaaggcaaatcaaaatcttcgaggcagaaacacttggtttttgacaataaagattccaagaaagcaaaaaataatgagcaaaaaaatgatgtggtggatgagaagtctaatttctcaggttatgaaatctattctggaaaactcttttttgacaagaaaaatagaattacaggagatcaaatttcagcaaatgggaaagctgatataagtgatgtaagactcacaagtaaagccctaatatggggttcttctttactcagtcttgaggatgtcatctctgtaagtttcacagaccaagacactactataattctattgctatttggtccacttgggctgaccatctatctttgatgatttgtttatatgttggcaggtatcttacagttctggtgtccaacatttcattgtgcatgcatacccttctaagaagtatttgtttggaaagacacacagagtacggaaggacctccggtttatagcccctactgtagaggaggccatttcatgggtaacatgctttgccgaacaaaacatatatgttaacatgctacctctccctccaacatccagtaccgagcaagaccttgatggtcccctcagtggtgctttatttgaccacccacccatcaaatgtagaactccaccgaggatacttgttatactgaaccctcggtctgggcatggtagatcatgcaaagttttccatgacaaagcagaacctatttttaaggtaccttctgatactctcataatgcaagcttctacttattgctctgcagtaagcaacatatagcttgactaactgtatatgtctattattcttcttggcaataaactttctttttgaagcttttctttaaaccattcgctgtttagtctcaaggagatgtcatgaggaatagaatagtacctctgttcttttctgtatcgaaattattggttgtttcatgttctatgatgtgtaactttgaattaaactctgtagaacttaatattgttacaacttaatgtttcttatgatgcaaatctactgatgtagttcttttacgggcaatctagatacctccaaacatattgatggttaatgtatagattatttgaccatggagattctttagtgccaactaaagaggaatgtttggtattttttgtatcccagtaatggatttttagttccaacagtgaagaactcatgaagagcatatcacgtttctctttaatggatttttagttccaacctgaagtgttaagtttagaaaatatcaaaataatgatccacggttagatttgcagatgactaatttatgtttgttgtttgccctaccaatctagacatgtgggggacatcatacattccttctattttagtagctctacaaaactcctgggcttccatctgatgctttagcagtaaaggattcaattgtgaatgcagcaacggagttggacataaagctgggtaaaatttattgacaaaaggttaagggagattatttaaccccctttctcctggcagcacaggctgtcaagttgcaaatttacttttcaatttagaccaactaaaattgcacttccttcaccttttaatcgaaagtgtataatcgcagttaacttataggcctccttcgagatgtcctttaaaaaaaagagagaattgtgctgactcgatcacctcctctcctcttagatatttgctaatggattatttttattgcttgtatgcattcacatttctcaacttggtgattttttacccgttaccctgtttttattattcatgcgtgcctacataaactttatatcatttatttcccgctattaattttgtatcatctgatgtagcttgcaggttttcacatggaagtggttaaaactactcatgctggtcacgctaaatctcttgcatctacatttgattttagcgcattccctgatggtataaacagcacagatgttgccaagtagtttatgtaggtcaacacggcaaccatttcaactggttgaattgataatgtattaaatgttttgtaggaatcgtgtgtgtaggtggtgatggaattgtaaatgaggtttgtccttgatgattatatattatagtttaatgggatttagtaaaacttatatatgatagctgaacatttatagttctgcaggtcttcaacggtctactcagtagaagtgatagagcagaggctgtatcaattccagttggaataatcccagcaggatctgacaattcacttgtttggactgttttgggagttaaagatccaatttcagcatcattactaattgtgaaggtatgcctatcgctataagcttacaaagttacaatgtgaatctttcacgacctcttcttacaggaagagaaaatttcaacatcacccttaaggcttttcagttaattttgtccaaaattattagatcacttatagcttttctcataaggtctgttccttgataacagggtggctttactgccctagacatcctgtctgttgagtggatccagtctgggctaatacactttgggacaactgtttcatactatggttttatcagtgatggtaacttcttgtacaagacgtttgctctttaatactccctctgtcccataatataagggattttgggtggatgtgccacatcctagccacaatgaatctggatagtatccagattcattgtgctaggatgtggcacatccacccaaaatcccttatattatggtagttctcatttatactgtatgcactgatatcctaagggctaaggccacaaaagttgcgtacattctaaatccctcagattcatatatcttgcattgccattttttccataaatcttgaaatttggaatgcttcataagttgtattgggacaatggtaaactttttagctgacaaaagtacttttagaatacgatagtttttaaaatacttttggtttaccaaaaattagaccgccttgagtacttatccttatactaaacacttgatctgatgcatgctgagttgctcttcccaacagctttactaggctaatgatctggcatatactttcatcatttcactcaattagcacatacaagttatcttactgtactcttaattgtaaaatttgagataacttgtatgcttcattggtaaatttgctattgtctccgtttcttcaatgactgctcattaaagtgtagtttatttatctatgttccagtatttgcagcagtgcaatgtagtttagcagtacaggattgcataataatttaataagctgaaaaaggcactattactttgctgcagtcctggagctttctgagaaatatcaaaagaaatttggccctcttcgatattttgtggctggaatactcaaatttttttgcctgccaagctatttctatgagttagagtatcttccttcttcaaaggagatgactggccatggaaaaggtataggacaagaaaactttgtgtctgatgtatataccaatgtaatgcgcagccgatcaaaaagagaaggaattccacgagcttccagtttgtcaagtattgactctattatgactccaagtcggatgtcacttggggacgttgatacatcaggtagcacagcagcaagcactgaaccttcagagtatgttcgtggtcttgatccaaaagcaaaacgcctttctttgggcagaagcaacattgtttcagaaccagaggaagttttacaccctcaaccacatcattcatcattctggccaagaaccaggtccaaaacaagaactgagagaaattcagttggtgtcactactaacgatacacgattatcttgggcagccccatcaattcatgacaaggaggacatttcctcaacaatttcagatccaggacctatttgggactctgaaccaaagtgggacaatgggccaaaatgggatacagagctaacctgggagtctgaccaccctattgaactccctggaccaccagaagacaatgaaattggaccatcagtggaacttgtgccaaatttggatgataaatgggtagtcaggaaaggacactttcttggtgttctagtttgcaatcattcatgcaagacagtgcaaagtttgagttcgcaggttattgcaccaaaagccaaccatgatgacaacactttggacttgctcttagttggtggaaagggtagatggaagttgttgaaatttttcatacttctgcaatttggtcgccatctttctttgccttatgtggaatatgtgaaggtaacatgcacaattctttcttttctcaagctattttttcaccctcttgtatttatgcttttcagacaagggatttttcattcgagtaccagtggcaaattttccgaatacctgtttattacttaggtcctctgaaataaataccgtttttacgtttgaaacaaattaacttctctacatagttgaatgcattctgaaaacaaacatattccaatgtgtatattctgtttttttttgttgagaggatattatcatatacgctcatgaatacctgatttcacctttttattatcgtaaaccttttggcttcttaagagcagcagtctgcagtgcattttaacttttgttatgtcaatagaagtatgagctgtttggacctgttgggcggtctgggagtttatgtcagctctggtgatggatcactgaaagttcacctaaattaagacagtggcgaatagttatcaaaacatgctctggggctctgggctaaattattatttgcacttatattttcatctaccaaggataatatctaacttttagctgacgttgacacaggtaaagtctgtcaagcttaaaccaggtgcaaacacgcacaatgggtgtggaatagacggtgagctttgccgcgtcaagggacatgtactctgctccctgttacaagagcaatgcatgcttattggccggcaaagcagacaatctacttaagtgctgtaaaattagttgaatttcgagtttttgaggcactgtattttctgtttccacttcgaacaactgatttttttttcttttgagttgtctatatttcgctacttgctaatggggtgtgtgagtgggttcagaacgtgcagacctcgagaatttggactgaacaaacaatgctgtgatgcttctgtatattcgagtgattataggagaataccttgattcttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0541500, RefSeq:Os04g0541500