Os04g0573200

From RiceWiki
Revision as of 19:57, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0573200

Description

Heavy metal transport/detoxification protein domain containing protein

Version

NM_001060148.1 GI:115460025 GeneID:4336726

Length

4430 bp

Definition

Oryza sativa Japonica Group Os04g0573200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29272920..29277349

Sequence Coding Region

29272988..29273236,29273335..29273358,29274615..29274687,29274777..29274911,29275418..29275638
,29276974..29277210

Expression

GEO Profiles:Os04g0573200

Genome Context

<gbrowseImage1> name=NC_008397:29272920..29277349 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29272920..29277349 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgggcttcctccgggccttgaccgccgcctccgctgtgcccgcagcagccgccgtcgcagccgtcgcactctccaccaactcctcctcttcctccagactccggctcccctcgcccgcctcgctcccctccctctcctccgcgtacgccgctgccccggcctccggctccgcccgcaagccgaacgccgtgcctccgatggccgccgccgccgccacggccgatctctctgccgccgccgataagggcgccgcgcttccggagctcatgacggaattcatggtggatatgaaatgtgatggttgtgtgacagcagtgaaaaacaagttccaaactcttgaaggaattaaaaacattgaggtggaccttaataatcaagttgttagggttcttggatctctcccagtgaacacaatgctggatactctgcaccaaacaggccgagatgctcgtctaattgggcaagggaacccaaatgattttttagtatctgctgctgtagctgagttcaaagggcctgttatatttggtgttgttcgtctggctcaagttaatatggaattggctatagttgaagccacttttagtggtctatcacctggtaaacacggatggtcaataaatgaatttggggatttgacaagaggtgcagaaagtactggcaaagtctataacccatcggattatagatccaataagcctcttggtgacctgggaacactagaagctggagagaagggtgaagcccaattttcagcttcaaaagagaaactgaaagttgttgacttgattggccgctctattgcgttgtatgccactgaggacagatcagatcctggcattgcagctgccgtgattgcaagaagcgctggggttggcgagaactacaagaagctgtgcacctgtgatggtgtcaccatttgggagtcaagctaa</cdnaseq>

Protein Sequence

<aaseq>MVGFLRALTAASAVPAAAAVAAVALSTNSSSSSRLRLPSPASLP SLSSAYAAAPASGSARKPNAVPPMAAAAATADLSAAADKGAALPELMTEFMVDMKCDG CVTAVKNKFQTLEGIKNIEVDLNNQVVRVLGSLPVNTMLDTLHQTGRDARLIGQGNPN DFLVSAAVAEFKGPVIFGVVRLAQVNMELAIVEATFSGLSPGKHGWSINEFGDLTRGA ESTGKVYNPSDYRSNKPLGDLGTLEAGEKGEAQFSASKEKLKVVDLIGRSIALYATED RSDPGIAAAVIARSAGVGENYKKLCTCDGVTIWESS</aaseq>

Gene Sequence

<dnaseqindica>69..317#416..439#1696..1768#1858..1992#2499..2719#4055..4291#ggaaattccctgcacacggaggcggggtaggagaatcgacgaggcataaaacaacgcggggggcacaaatggtgggcttcctccgggccttgaccgccgcctccgctgtgcccgcagcagccgccgtcgcagccgtcgcactctccaccaactcctcctcttcctccagactccggctcccctcgcccgcctcgctcccctccctctcctccgcgtacgccgctgccccggcctccggctccgcccgcaagccgaacgccgtgcctccgatggccgccgccgccgccacggccgatctctctgccgccgccgataaggtacggacgcgacgcgctccacggttggtgcccgtgtgtgcttgtttagggctgagctttctagtctgacgtctggtggtttggtgcgctttttgcagggcgccgcgcttccggagctcatggtaagcggcgctgacttagattatagtagcattttgtgttggtgactaggtggtttgctgcgatgctgctagggtgggaggatgagaaccttagtttagctacttacggatttcatgctggattgaagtagtccgcggtaagtggggaatttcgctaaatgaatctcagtataggttcgaaatagctggggaatgaattggtcagagtacttatggtgatatatggttgctgtgagattgattggttgaacagtttgtatttctgatatcaagccattgaggcgtatattgcctcttcagttgctgtcaagtgctaagctactgccaactgagaattaaagttatcgatcagagtgacatagtgctagattgctagtatgttagtatatgagttgcaagagggattttcatatgtccttgcattctgactgcagaactgcaagcgatggtttccttttgcattaagagactacaaaaagctggaataaactgcatatatgaatggattaagatgagagttcaattgaactattcgtctactatcatgctgaccttctgttcttcagactgttgtttaagattgtcagtatgaagagctggaggcaactatgaggatagtataatggatatccttttgcgcgttcgcgaaaaaaagtataatggatatctattttcttattttacataccttgtaaagaaggtctaaaagaaaatttgatccagttatacaattgctgccaatgattcagaaagcccatggttggttctacatagcttaagataatgtcctatgctattttctaatattaatgtcctagcacatatgatttaagggtatataagtctttcacaagctaggttttaatatgttggtggattacgatcataactaagattaggtaattcaaaagctacagtatgtaagattgaaaaagcaccacaaagtgggtttgtttcattttgaaaagatatgtgttaattccaggtggattggtatgctcctaacgggaggatggtcatctcagcaagtcatccttttataatgtgttttcctgttgtcttagtatttttgagctgttgtctactgttcatctaatttccaatcctgctaataaagactatgaaatcagaaatactatgcattttgtatcccttttttacacggtgcactgttttgacttgcatattttgtgatattgtttgatttatgaaagcaaacaaatactaaataatctagtgccttctatgttctgaagacggaattcatggtggatatgaaatgtgatggttgtgtgacagcagtgaaaaacaagttccaaactcttgaaggtttgtcaccatgtaattttagtattcttttgaaatacagttttgtttatcgtttgcctctggtttatgaagactgcctattactacaggaattaaaaacattgaggtggaccttaataatcaagttgttagggttcttggatctctcccagtgaacacaatgctggatactctgcaccaaacaggccgagatgctcgtctaattgggcaagggaacccaaatggtgtgtgttaatttctatattttatatgacaatattttatattagccttaatatcagctggtatcattgctttttaatcatgtggtacttgattctgatgttcagttataggaaattcagagatcagtcgtgtgtaaattaatgaattgtcatactggttctagtcagcaaatgtaggcattatatatctgtcatctcttttgtacttatataatgcatctgaaatctaaataagatgcttgatttacttcaactgtgatgctgacttatatacatctttaaaatgcatttaatctttaccaggtcctcctgaactcatttctagttattgaaaaaaaaataataatcagtatttccactatagaaagatactgcacaaaacaaactttctgattgctggcatgtttattgtattttcctgaggcatgattgctggtcagttttttgtttatgtgacgcacacctattctattatgagaattaattccatgcactaacttctgcagattttttagtatctgctgctgtagctgagttcaaagggcctgttatatttggtgttgttcgtctggctcaagttaatatggaattggctatagttgaagccacttttagtggtctatcacctggtaaacacggatggtcaataaatgaatttggggatttgacaagaggtgcagaaagtactggcaaagtctataacccatcggattatagatccaataaggtaaggtttaaggatccacatctgtcttttaccttccaaaagagtaagtagtaactagccctttaggatcaatcattggttatcctgatgttgctgcaatacgaaaggcatgcattttctaagcagctagtcaccccggacttcaacgtcgtgtgtcctatcacagttgactatgagcatccatgcgattcttggttgtcatcgatcgtaacttcatataatgtgacatattttttgtttcctttagaacttgttcagataggtgaggtttaaacccaaaccccttgcatgtgtagggatgttagtttaacactttaatttcattacggaaattttgaagggattagcataattcccttgcatatctatggtcccatagtcctggttatctactagacaaagtgacaagcattctatcagaggcagaaatgccagattatccaaattaatatgcccattgcatgtaggagtatcattggaacttggaagacatgtcttctccaagcggatagtcatgtctatagaatttttttccttttctgcagccacatttgcacgtgttgtatcctaatcagttgatatgtggtcacagcttgtatagactacagtaatatatctagaggttagatttactactacatatttctcttccatttacagtatccggtgatctacctactgtctactgctattcactttgtcttaaacacattaatacaatgaccaacttcaccaaactaaggtggctagtgcaaatatcagtagcacagctgtcctctgccttctgttgcataagctgcagcacatgccttgtcagaacgcagcagaatggaatcgaacaaaacctttgttcacctcactggtgggtcaggtagggcgggccattccactacttgcattcacttcattagatattactcctagacttgaaaaactgtggttgtgtttagttccacgctaaaattggaagtttgaaaaaattgaaacgatgtgatgaaaaagttggaaatttgtgtgtgtagaaaagtttgatgtgacggaaaagttggaatctaaacatggcctatatgacgattggcagcaaattaaagtcacagcatttgttttttttagttgaagtgttattgaagtatcgtgctatatttattgaagtgctccatcctttagtaacaaagtgataactggaagaacatacttcaaatgctgtttttccctaattaagcacttgctttgcctccaatggaagctggaaaatatcatatcttcttttaaaagttttcaagggtagtgctattttttagtaatttcggtatgtgcctgatttttctgaaacagcctcttggtgacctgggaacactagaagctggagagaagggtgaagcccaattttcagcttcaaaagagaaactgaaagttgttgacttgattggccgctctattgcgttgtatgccactgaggacagatcagatcctggcattgcagctgccgtgattgcaagaagcgctggggttggcgagaactacaagaagctgtgcacctgtgatggtgtcaccatttgggagtcaagctaatttgtgttactagtgaggtttccattctactgtttgctccaatgtgttgtacacgaagtaatgtagaaacaatcaaccaactactgaacaattggaataagcatggatacagtgaggaataaagcttgttttggagtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0573200, RefSeq:Os04g0573200