Os04g0618700

From RiceWiki
Revision as of 19:59, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0618700

Description

Protein kinase-like domain containing protein

Version

NM_001060429.1 GI:115460587 GeneID:4337016

Length

4292 bp

Definition

Oryza sativa Japonica Group Os04g0618700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31819345..31823636

Sequence Coding Region

31819755..31820101,31820424..31823628

Expression

GEO Profiles:Os04g0618700

Genome Context

<gbrowseImage1> name=NC_008397:31819345..31823636 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31819345..31823636 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaggaataaatttgcaagcaaaatgtcgcagcattacacgaagacgatttgcattgccgtcgtcttggtggccgtgctgttctcgttgtcgtcggcggcggcggccggctccggtgcggcggtgtccgtgcagctcgaggcgctgctggagttcaagaacggcgtcgccgacgacccgctcggcgtgctggccggctggagggtggggaagtccggtgatggcgccgtccgcggcggcgcgctgccgcggcattgcaactggacgggcgtcgcctgcgacggcgccggccaggtgacgtccatccagctgccggagtcgaagctccggggcgcgctctccccgttcctcggcaacatctcgacgctccaggtcatcgacctgacgtcgaacgccttcgccggcggcatcccgccgcagctcggccgcctcggcgagctcgagcagctagtcgtttcttcgaactacttcgccggcggcatcccgagcagcctctgcaactgctcggcgatgtgggctctcgccctgaacgtcaacaacctcaccggcgcaatcccttcttgcatcggggatctgtccaatctcgagatcttcgaagcctacctgaacaatcttgacggggagttgccgccgtccatggcgaagctcaaaggcatcatggtcgttgacctcagctgcaaccagctgtctggctcgatcccgccggagatcggcgacctgtcgaacctgcagattcttcagctgtacgagaaccggttctccggccacatcccgcgggagctcggccggtgcaagaacctcaccttgctcaacatattcagcaacgggttcaccggcgagatccccggcgagctcggcgagctcacgaacctggaggtcatgcgcctgtacaagaacgcgctcacgtcggagatcccccggtcgctccggcgttgcgtgtcgctgctgaatctcgacctgtcgatgaaccagctcgccgggcccatcccgccggagctcggcgagctcccgtcgctccagagattgtcgctccatgccaaccggctcgccgggacggttccggcgtcgctgacgaatctcgtcaacctgaccatcctggagctgagcgagaaccacctgtccgggccgcttccggcgagcatcgggtcactgcggaatctccggcggctcatcgtccagaacaactcgctctccggccaaattccggcgagcatcagcaactgcacgcagctggccaacgcgagcatgagcttcaacttgttctccgggccattgccggcggggctcggccggctacagagcctcatgttcttgtcgctcggccaaaactcgttggccggcgacatacccgatgacctgttcgactgcggccaactccagaagctcgacctgtcagagaacagcttcaccggcggcctgagccgccttgtcggccagctcggtaacctcacagtgctgcagctgcaggggaacgctctgtcaggtgagataccggaggagatcggcaacatgacgaagctcatcagcctgaaactcggcaggaaccggttcgccggacatgtcccggcgagcatctcgaacatgtcctccctccagttgctcgatctggggcacaatcgcctcgacggcgtgttcccggctgaggtgttcgagctgcggcagctcaccatcctcggcgccgggtcgaacaggttcgccggccccatccccgacgccgtcgccaacctccggtcgctctcgttcctggacctgtcgagcaacatgctcaacggcacggtgcccgcggcgctgggcaggctcgaccagctcctcacgctggacctctcgcacaaccgcctcgccggcgccatccccggcgcggtgatcgcgagcatgagcaacgtgcagatgtacctcaacctgtcgaacaacgcgttcacgggcgcgatcccggcggagatcggcggcctcgtgatggtccagaccatcgacctgtcgaacaaccagctgtccggcggcgtcccggcgacgctcgccgggtgcaagaacctctactcgctcgacctctccggcaacagcctcaccggcgaactcccggccaacctcttcccccagctcgaccttctgacgaccctgaacatctccggcaacgacctcgacggagagatccccgccgacatcgccgcgctgaagcacatacagacgctcgacgtgtcgaggaacgcgttcgccggggccataccgccggcgctggcgaacctgacggcgctccggtctctcaacctttcgtcgaacaccttcgagggccccgtccccgacggcggcgtgttccggaacctgaccatgtcgagcctgcaggggaacgccggcctctgcggcgggaagctcctcgcgccatgccacggccacgccgccgggaagaagcgggtgttctcgcggacggggctcgtgatcctcgtcgtgctcatcgcgctgtcgacgctgctcctcctcatggtcgcgacgatcctgctcgtcagctaccgccggtacaggaggaagagacgtgccgccgacatcgccggcgactcgccggaggccgccgtcgtggtgccggagctgaggaggttcagttacggccagctggcggccgccaccaactcgttcgaccaaggcaacgtcatcgggagcagcaacctgagcacggtgtacaagggcgtgctcgccggcgacgccgacggcggcatggtcgtcgccgtgaagcggctgaacctggagcagttcccgtccaagtccgacaagtgcttcctcaccgagctcgccacgctgagccggctgcggcacaagaacctggcgcgtgtggtcgggtacgcgtgggaggccggcaagatcaaggccctggtcctcgactacatggtcaacggcgacctggacggcgcgatacacggcggcgccgccgcgccgccgccggcgccgtcgcggtggacggtcagggagcggctgcgggtgtgcgtgtcggtggcgcacgggctggtgtacctccactccgggtacgacttccccgtcgtgcactgcgacgtcaagccgtccaacgtcctgctcgacggcgactgggaggcgcgcgtcagcgacttcggcaccgcgcgcatgctgggcgtccacctgcccgccgccgccaacgccgcggcgcagtcgacggccacctcgtcggcgttccggggcaccgtgggttacatggctccagagttcgcgtacatgaggacggtgtcgacgaaggtggacgtgttcagcttcggggtgctggcgatggagctcttcaccgggcggcggccgacggggacgatcgaggaggacggcgtgccgctgacgctgcagcagctcgtcgacaacgcggtctcgagggggctcgacggcgtccacgccgtcctggacccccgcatgaaggtcgccaccgaggccgacctgtccacggcggcggacgtgctcgccgttgccctgtcctgcgccgcgttcgagccggccgaccggcccgacatgggcgccgtgctctcgtccttgctcaagatgagcaagctcgtcggagaagactga</cdnaseq>

Protein Sequence

<aaseq>MERNKFASKMSQHYTKTICIAVVLVAVLFSLSSAAAAGSGAAVS VQLEALLEFKNGVADDPLGVLAGWRVGKSGDGAVRGGALPRHCNWTGVACDGAGQVTS IQLPESKLRGALSPFLGNISTLQVIDLTSNAFAGGIPPQLGRLGELEQLVVSSNYFAG GIPSSLCNCSAMWALALNVNNLTGAIPSCIGDLSNLEIFEAYLNNLDGELPPSMAKLK GIMVVDLSCNQLSGSIPPEIGDLSNLQILQLYENRFSGHIPRELGRCKNLTLLNIFSN GFTGEIPGELGELTNLEVMRLYKNALTSEIPRSLRRCVSLLNLDLSMNQLAGPIPPEL GELPSLQRLSLHANRLAGTVPASLTNLVNLTILELSENHLSGPLPASIGSLRNLRRLI VQNNSLSGQIPASISNCTQLANASMSFNLFSGPLPAGLGRLQSLMFLSLGQNSLAGDI PDDLFDCGQLQKLDLSENSFTGGLSRLVGQLGNLTVLQLQGNALSGEIPEEIGNMTKL ISLKLGRNRFAGHVPASISNMSSLQLLDLGHNRLDGVFPAEVFELRQLTILGAGSNRF AGPIPDAVANLRSLSFLDLSSNMLNGTVPAALGRLDQLLTLDLSHNRLAGAIPGAVIA SMSNVQMYLNLSNNAFTGAIPAEIGGLVMVQTIDLSNNQLSGGVPATLAGCKNLYSLD LSGNSLTGELPANLFPQLDLLTTLNISGNDLDGEIPADIAALKHIQTLDVSRNAFAGA IPPALANLTALRSLNLSSNTFEGPVPDGGVFRNLTMSSLQGNAGLCGGKLLAPCHGHA AGKKRVFSRTGLVILVVLIALSTLLLLMVATILLVSYRRYRRKRRAADIAGDSPEAAV VVPELRRFSYGQLAAATNSFDQGNVIGSSNLSTVYKGVLAGDADGGMVVAVKRLNLEQ FPSKSDKCFLTELATLSRLRHKNLARVVGYAWEAGKIKALVLDYMVNGDLDGAIHGGA AAPPPAPSRWTVRERLRVCVSVAHGLVYLHSGYDFPVVHCDVKPSNVLLDGDWEARVS DFGTARMLGVHLPAAANAAAQSTATSSAFRGTVGYMAPEFAYMRTVSTKVDVFSFGVL AMELFTGRRPTGTIEEDGVPLTLQQLVDNAVSRGLDGVHAVLDPRMKVATEADLSTAA DVLAVALSCAAFEPADRPDMGAVLSSLLKMSKLVGED</aaseq>

Gene Sequence

<dnaseqindica>3536..3882#9..3213#atggttgcatggagaggaataaatttgcaagcaaaatgtcgcagcattacacgaagacgatttgcattgccgtcgtcttggtggccgtgctgttctcgttgtcgtcggcggcggcggccggctccggtgcggcggtgtccgtgcagctcgaggcgctgctggagttcaagaacggcgtcgccgacgacccgctcggcgtgctggccggctggagggtggggaagtccggtgatggcgccgtccgcggcggcgcgctgccgcggcattgcaactggacgggcgtcgcctgcgacggcgccggccaggtgacgtccatccagctgccggagtcgaagctccggggcgcgctctccccgttcctcggcaacatctcgacgctccaggtcatcgacctgacgtcgaacgccttcgccggcggcatcccgccgcagctcggccgcctcggcgagctcgagcagctagtcgtttcttcgaactacttcgccggcggcatcccgagcagcctctgcaactgctcggcgatgtgggctctcgccctgaacgtcaacaacctcaccggcgcaatcccttcttgcatcggggatctgtccaatctcgagatcttcgaagcctacctgaacaatcttgacggggagttgccgccgtccatggcgaagctcaaaggcatcatggtcgttgacctcagctgcaaccagctgtctggctcgatcccgccggagatcggcgacctgtcgaacctgcagattcttcagctgtacgagaaccggttctccggccacatcccgcgggagctcggccggtgcaagaacctcaccttgctcaacatattcagcaacgggttcaccggcgagatccccggcgagctcggcgagctcacgaacctggaggtcatgcgcctgtacaagaacgcgctcacgtcggagatcccccggtcgctccggcgttgcgtgtcgctgctgaatctcgacctgtcgatgaaccagctcgccgggcccatcccgccggagctcggcgagctcccgtcgctccagagattgtcgctccatgccaaccggctcgccgggacggttccggcgtcgctgacgaatctcgtcaacctgaccatcctggagctgagcgagaaccacctgtccgggccgcttccggcgagcatcgggtcactgcggaatctccggcggctcatcgtccagaacaactcgctctccggccaaattccggcgagcatcagcaactgcacgcagctggccaacgcgagcatgagcttcaacttgttctccgggccattgccggcggggctcggccggctacagagcctcatgttcttgtcgctcggccaaaactcgttggccggcgacatacccgatgacctgttcgactgcggccaactccagaagctcgacctgtcagagaacagcttcaccggcggcctgagccgccttgtcggccagctcggtaacctcacagtgctgcagctgcaggggaacgctctgtcaggtgagataccggaggagatcggcaacatgacgaagctcatcagcctgaaactcggcaggaaccggttcgccggacatgtcccggcgagcatctcgaacatgtcctccctccagttgctcgatctggggcacaatcgcctcgacggcgtgttcccggctgaggtgttcgagctgcggcagctcaccatcctcggcgccgggtcgaacaggttcgccggccccatccccgacgccgtcgccaacctccggtcgctctcgttcctggacctgtcgagcaacatgctcaacggcacggtgcccgcggcgctgggcaggctcgaccagctcctcacgctggacctctcgcacaaccgcctcgccggcgccatccccggcgcggtgatcgcgagcatgagcaacgtgcagatgtacctcaacctgtcgaacaacgcgttcacgggcgcgatcccggcggagatcggcggcctcgtgatggtccagaccatcgacctgtcgaacaaccagctgtccggcggcgtcccggcgacgctcgccgggtgcaagaacctctactcgctcgacctctccggcaacagcctcaccggcgaactcccggccaacctcttcccccagctcgaccttctgacgaccctgaacatctccggcaacgacctcgacggagagatccccgccgacatcgccgcgctgaagcacatacagacgctcgacgtgtcgaggaacgcgttcgccggggccataccgccggcgctggcgaacctgacggcgctccggtctctcaacctttcgtcgaacaccttcgagggccccgtccccgacggcggcgtgttccggaacctgaccatgtcgagcctgcaggggaacgccggcctctgcggcgggaagctcctcgcgccatgccacggccacgccgccgggaagaagcgggtgttctcgcggacggggctcgtgatcctcgtcgtgctcatcgcgctgtcgacgctgctcctcctcatggtcgcgacgatcctgctcgtcagctaccgccggtacaggaggaagagacgtgccgccgacatcgccggcgactcgccggaggccgccgtcgtggtgccggagctgaggaggttcagttacggccagctggcggccgccaccaactcgttcgaccaaggcaacgtcatcgggagcagcaacctgagcacggtgtacaagggcgtgctcgccggcgacgccgacggcggcatggtcgtcgccgtgaagcggctgaacctggagcagttcccgtccaagtccgacaagtgcttcctcaccgagctcgccacgctgagccggctgcggcacaagaacctggcgcgtgtggtcgggtacgcgtgggaggccggcaagatcaaggccctggtcctcgactacatggtcaacggcgacctggacggcgcgatacacggcggcgccgccgcgccgccgccggcgccgtcgcggtggacggtcagggagcggctgcgggtgtgcgtgtcggtggcgcacgggctggtgtacctccactccgggtacgacttccccgtcgtgcactgcgacgtcaagccgtccaacgtcctgctcgacggcgactgggaggcgcgcgtcagcgacttcggcaccgcgcgcatgctgggcgtccacctgcccgccgccgccaacgccgcggcgcagtcgacggccacctcgtcggcgttccggggcaccgtgggttacatggctccaggtaaaagctacttcctccatttcagattataaaacgttttaactttgattaaggttaaatcgttttaagtttgacgaagtttatgaaaaaaaaataataatatttttaactcacgacaaaattattataaaaatatattcaattattaatttgataaaactaatttagtttgtctataaacttagttaaacttaaaacaggttaattttgatcaaaattaaaacgtctggtaatcggagggagtaccaaactaccaatccaaccatttcgtctcagtgatctctgaactgaaaacgtctaactctgtgctgaaaaaattcagagttcgcgtacatgaggacggtgtcgacgaaggtggacgtgttcagcttcggggtgctggcgatggagctcttcaccgggcggcggccgacggggacgatcgaggaggacggcgtgccgctgacgctgcagcagctcgtcgacaacgcggtctcgagggggctcgacggcgtccacgccgtcctggacccccgcatgaaggtcgccaccgaggccgacctgtccacggcggcggacgtgctcgccgttgccctgtcctgcgccgcgttcgagccggccgaccggcccgacatgggcgccgtgctctcgtccttgctcaagatgagcaagctcgtcggagaagactgaacaaaaaaaaaaaagaagagaaaagctaaactctcgctgcaattctgcagaatgcagcagcgaaaacgtgcaaatttcttggaagattcagagttcagttcatgatgatctcaaatggtttttcgagttgtttgcattgcgaactttctccattgatgaggtgtactgttgctactgtgcatggtcaaggagccgttcgtgtgagcttactgagggtgtgttagttcttcgggagtaaagcttttgaattatacagacacatatttgaagtattaaatgtatactaataacaaaacaaattacagattctgcctgtaaactgtgagacaaatttattaagactaattagttcatcattagcaaatatttattgtagcatcatattgttaaatcatggcgtaatttggctc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0618700, RefSeq:Os04g0618700