Os04g0651500

From RiceWiki
Revision as of 20:00, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0651500

Description

Growth factor, receptor domain containing protein

Version

NM_001060632.2 GI:297603477 GeneID:4337233

Length

3723 bp

Definition

Oryza sativa Japonica Group Os04g0651500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33590943..33594665

Sequence Coding Region

33590943..33591072,33591547..33592482,33593166..33593273,33593461..33594665

Expression

GEO Profiles:Os04g0651500

Genome Context

<gbrowseImage1> name=NC_008397:33590943..33594665 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:33590943..33594665 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcatagatcaatgacaatatccttgcacgaagaggtttctccaaagcggtgcccccaaggaggatgcgacgtggatcaccgccaccgctcgttcggaaccgaagcaaggttttcacccggagaatatgcgacgattggagcagtcgtgtttcagcttctggtgacgacgacgacactgtcagcagcagccccgaccccgatagccctgcctggttgcccggaaagctgcggcggcatacaagtgccgtaccctttcggcatcggcgacgggtgctcctaccatggcttcaacctcacatgcgacgacgaggcgcaccaccaccagacgccgcccaagctgttcatggccacagacaacggcaccgtcgtccaagtgctcaacatctccttgccggacggcactgtacgcgtccgcagcaagctttcgcagtcatctattgccggctcctcctcctcctcgtctaatgcctcgtcgtcacggtccgacctaccggccgacgggccgttcacggtgtcctccgcgtataactggctggttgccttcggctgcaacatcgtggccgaccttaccccgtacggcaatatcgccgacggcagcagctgcgccgccacatgtatagatggatggcaaaatttcgcaggcccctcgtgctccggcatcgcgcgctgccgtacgtccgttgggaggggtgtccactcgtacacgatccaggtcacgtctctgatagaccgaaattccatgggtgcctcgacatcgacgacatgggcagctgcgttcgtagctgagcagggctggttcagcgcgaatgagaatgccatgttgtacaacttcaccaattggctgccgttcacggtcgagagtgttccggtggtgctggaatggtggctggatttgatccgtgatggagccatactgccgttgtcagttgggcccaatactaccgactttagatgcctaagcttgcatagttcaagctattacaacgatctaaactacgaccgaagacggtgcaactgttcccaaggatacgaaggcaatccttacatccgtgatggatgccgagatatcgatgagtgccagcagccagatgtttatccgtgtcatggaacatgcatcaatatgcctgggacgtaccgatgcttagcaaagaaaagtgtcaaaagcctcccaggtttaataaccattatagcagttagtgctggttttgggctactgttttcacttcttggtgttgccaaaatcacaaataaaatcaaacaacgcagagccaagaagttgagacggaagtttttcaagaagaatcatggactgcttcttcaacaattaatatcttcaaacaaggatatagctgaaaggatgaagattttcagtttagaagaattagaccaggcaaccaacaaatttgatcaaaatcgcattcttgggggcggtggccatggcacagtctacaaaggtatattatctgaccaacgtgtggtggccatcaaaaagtcaaaaattgtggttcaaagggagattgatgatttcataaatgaggttgtcatactttcacaaactaaccataggaatgtggtgaagctatatggttgttgccttgagacagaagttcctttattagtttatgagtttatatcgaatggaactctttcatttcatcttcatggccaaaatgagaatcctttgaagtggaaagatagattgagaatcgcactagaaactgcaagggctattgcatatcttcactcggcagcttctatatcagtgttacatagagatatcaaatctacaaatatactactcactgatactatgacggctaaagtatcggactttggagcttcaaggtcaatttcaattgacgagacaggaatactcaccatcatccagggcacttatggttatctagatcctgaatattattactctagtcgactgactgagaaaagcgatatttatagtttcggtgtcatcctagctgaactattgacaagggtaacaccggttttctcctccgaaacatcagaaaggacaagcctggcatcatactttgtgtcgttcataagagacaaccgcttgtcagatattctggactctcaaattgttaatgaggtgggtgctgaagatgctaaggtggttgctaagcttgcagaagcatgtttaagattaaaaggtgaggaaaggcctacaatgaggcaagtggagacaacacttgaagatgtgcaaaggtcaaaagtccaacttaatcatcagattgcaagagtgagcaatagtaatacactaaaaaatcagacgtacgagggaagtaagtgctatgaaggaactagacaatatagcttggaaaaggagttcattcaatcatctgaatttccaagataa</cdnaseq>

Protein Sequence

<aaseq>MHRSMTISLHEEVSPKRCPQGGCDVDHRHRSFGTEARFSPGEYA TIGAVVFQLLVTTTTLSAAAPTPIALPGCPESCGGIQVPYPFGIGDGCSYHGFNLTCD DEAHHHQTPPKLFMATDNGTVVQVLNISLPDGTVRVRSKLSQSSIAGSSSSSSNASSS RSDLPADGPFTVSSAYNWLVAFGCNIVADLTPYGNIADGSSCAATCIDGWQNFAGPSC SGIARCRTSVGRGVHSYTIQVTSLIDRNSMGASTSTTWAAAFVAEQGWFSANENAMLY NFTNWLPFTVESVPVVLEWWLDLIRDGAILPLSVGPNTTDFRCLSLHSSSYYNDLNYD RRRCNCSQGYEGNPYIRDGCRDIDECQQPDVYPCHGTCINMPGTYRCLAKKSVKSLPG LITIIAVSAGFGLLFSLLGVAKITNKIKQRRAKKLRRKFFKKNHGLLLQQLISSNKDI AERMKIFSLEELDQATNKFDQNRILGGGGHGTVYKGILSDQRVVAIKKSKIVVQREID DFINEVVILSQTNHRNVVKLYGCCLETEVPLLVYEFISNGTLSFHLHGQNENPLKWKD RLRIALETARAIAYLHSAASISVLHRDIKSTNILLTDTMTAKVSDFGASRSISIDETG ILTIIQGTYGYLDPEYYYSSRLTEKSDIYSFGVILAELLTRVTPVFSSETSERTSLAS YFVSFIRDNRLSDILDSQIVNEVGAEDAKVVAKLAEACLRLKGEERPTMRQVETTLED VQRSKVQLNHQIARVSNSNTLKNQTYEGSKCYEGTRQYSLEKEFIQSSEFPR</aaseq>

Gene Sequence

<dnaseqindica>1..130#605..1540#2224..2331#2519..3723#atgcatagatcaatgacaatatccttgcacgaagaggtttctccaaagcggtgcccccaaggaggatgcgacgtggatcaccgccaccgctcgttcggaaccgaagcaaggttttcacccggagaatatggtagggaaaagaaaggggtatgctaaacaacgcctataaggaggggaacgacgccaaacggcgtcgccgttgtcagtcggccaaatggctcggcaaggctttcgcccgcgattccctgtccaaacccacaccaccaatccgcatgacggattaattaggcttaataaattcgtctcgcgattttcaggtgagttatgaaattagttttttcattcgtgttcgaaaacttcttccgacatccggtcaaataaaatgtttgatgtgacatctaaattttttttcgcgaactaaaaaaaaggccctagtcactagtgtgggaggcgttgactggacttcgaagcatatgagatcaggataaaaacctttgctatatatattcctcatcagctgctgtaacggactgaatagaggaggctgctctactagcctagtagtagtactgtagtatagagataacttgcacgccgtctttagcgacgattggagcagtcgtgtttcagcttctggtgacgacgacgacactgtcagcagcagccccgaccccgatagccctgcctggttgcccggaaagctgcggcggcatacaagtgccgtaccctttcggcatcggcgacgggtgctcctaccatggcttcaacctcacatgcgacgacgaggcgcaccaccaccagacgccgcccaagctgttcatggccacagacaacggcaccgtcgtccaagtgctcaacatctccttgccggacggcactgtacgcgtccgcagcaagctttcgcagtcatctattgccggctcctcctcctcctcgtctaatgcctcgtcgtcacggtccgacctaccggccgacgggccgttcacggtgtcctccgcgtataactggctggttgccttcggctgcaacatcgtggccgaccttaccccgtacggcaatatcgccgacggcagcagctgcgccgccacatgtatagatggatggcaaaatttcgcaggcccctcgtgctccggcatcgcgcgctgccgtacgtccgttgggaggggtgtccactcgtacacgatccaggtcacgtctctgatagaccgaaattccatgggtgcctcgacatcgacgacatgggcagctgcgttcgtagctgagcagggctggttcagcgcgaatgagaatgccatgttgtacaacttcaccaattggctgccgttcacggtcgagagtgttccggtggtgctggaatggtggctggatttgatccgtgatggagccatactgccgttgtcagttgggcccaatactaccgactttagatgcctaagcttgcatagttcaagctattacaacgatctaaactacgaccgaagacggtgcaactgttcccaaggatacgaaggcaatccttacatccgtgatggatgccgaggtatttttttctttcctgctttattgtgtttgttgcagcgaaggctccaattttcatgtaaaagaaaagttatacatatggcccgttcttttctcatgaagttagagattttatctcgtttttcattagaggaattttacggtccttgaaaaaaataccttaaggtacctaaattttacactaaaatttttggtaccttgaagtacttagtacctagaggtatcaaattttacactagaaaaatatggtacctctagtaacttcttaaggatggtaaaattaaccttttcattagcacgttttttaaactactaaagacgcatttggtgcgaaaactttctatatagaagttgcttaaaaatcaaatatatctatttgttaaatttgtaataattaaacttaattaattatgcgctaatagctttctcgtttttcgtgcccatatttaatcttaatccacatcagattcgaacaccaccatatatagtatcacttgatataattatatagaacatgtaattatatcatactatcagttgatagaagctacttacctcgtcccaaactatagcaacctaagatgaaatgagactcatcctatgataacgaatctggacatgatgcatccaatcatgaattgcattctttaattttcactcccatatatttgttccccttttcagatatcgatgagtgccagcagccagatgtttatccgtgtcatggaacatgcatcaatatgcctgggacgtaccgatgcttagcaaagaaaagtgtcaaaagcctcccaggtacaaatgcaattcctcgcaaaaaaagaaaagaaaaaaagaagaagcaatcgatcacttgctcgattctattagcggagttttcgattttagaactgtatttgtagccttccaggtacaaatacagttcatttggatccattctatacattataaaccctatgttcctgacgtttattctctgcaggtttaataaccattatagcagttagtgctggttttgggctactgttttcacttcttggtgttgccaaaatcacaaataaaatcaaacaacgcagagccaagaagttgagacggaagtttttcaagaagaatcatggactgcttcttcaacaattaatatcttcaaacaaggatatagctgaaaggatgaagattttcagtttagaagaattagaccaggcaaccaacaaatttgatcaaaatcgcattcttgggggcggtggccatggcacagtctacaaaggtatattatctgaccaacgtgtggtggccatcaaaaagtcaaaaattgtggttcaaagggagattgatgatttcataaatgaggttgtcatactttcacaaactaaccataggaatgtggtgaagctatatggttgttgccttgagacagaagttcctttattagtttatgagtttatatcgaatggaactctttcatttcatcttcatggccaaaatgagaatcctttgaagtggaaagatagattgagaatcgcactagaaactgcaagggctattgcatatcttcactcggcagcttctatatcagtgttacatagagatatcaaatctacaaatatactactcactgatactatgacggctaaagtatcggactttggagcttcaaggtcaatttcaattgacgagacaggaatactcaccatcatccagggcacttatggttatctagatcctgaatattattactctagtcgactgactgagaaaagcgatatttatagtttcggtgtcatcctagctgaactattgacaagggtaacaccggttttctcctccgaaacatcagaaaggacaagcctggcatcatactttgtgtcgttcataagagacaaccgcttgtcagatattctggactctcaaattgttaatgaggtgggtgctgaagatgctaaggtggttgctaagcttgcagaagcatgtttaagattaaaaggtgaggaaaggcctacaatgaggcaagtggagacaacacttgaagatgtgcaaaggtcaaaagtccaacttaatcatcagattgcaagagtgagcaatagtaatacactaaaaaatcagacgtacgagggaagtaagtgctatgaaggaactagacaatatagcttggaaaaggagttcattcaatcatctgaatttccaagataa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0651500, RefSeq:Os04g0651500