Os04g0683900
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os04g0683900 |
|---|---|
| Description |
HMG-I and HMG-Y, DNA-binding domain containing protein |
| Version |
NM_001060841.1 GI:115461411 GeneID:4337449 |
| Length |
3886 bp |
| Definition |
Oryza sativa Japonica Group Os04g0683900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:35322203..35326088 |
| Sequence Coding Region |
35322355..35322612,35323000..35323149,35323251..35323415,35323548..35323618,35323994..35324609 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:35322203..35326088 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:35322203..35326088 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggatggcaaagaactcctctcaccgtccgaactgtcatactatgcgcaccagcagcatcagcatcagcatcagcagcatcagcagcaacaccggatgctcgggggcggaggaggcggcggcgggcatagcgcgtcgccgctcgccgggatgcacggcggcccgtcggtcatccgacccatgcccaacatggggatgagccccaccgcgatcctccagtccatcggcccgggcccgctcgccggcatgcagttccagatggacgccgcgccgccgccgccgccattgatgcacaacagcatggcctccgtctccgcctccgccggcgccggctcacccaccgtgccgccgtccgcgacgcccatggagccggtcaagaggaagcgaggccgcccgcgcaagtacggcccggacgggaccatgaaggtgtccaccgccgccgccgcgcagcaccagcagcagatgctgagcgcgccgccgaggatggggtccgtgtccggcgccgacatggttggcggcggctcagggatggacgactcggcgcagaagaagcggcgcgggcggccgccggggacagggaagaagcagcagctctcatcaccggttaagctttcagggggcaatgcgttcagtggctcagctggaacgagcttcacccctcacatcatcacggcatctccttcagaggacgttgcagggaagatcgtggcgttcgccaaccattcgtccagggcggtgtgcgtgctctcggccaccggctccgtctcccgggtggtcctccgccacccggccgacggcgccatgtcaagggttcacgcctcctcccactacaagaaccctgccatctacgaggggctgtacgagatcttgagcatgtcggggtgttacaacctgatgaacgaggggcagagcgacgggctgagcgtgacgctgtgcagccccgagaggcatatcattggaggcgttctcggcggagcattggtagctgccagcaccgttcaggtggtacttgggagtttcgtgcagggagggtcgaagcccaagtcgaagaaggccgggaaacagcagcagcaacaggcggcggcggcggccttcagctcggactcgctgaccggaggagggcaggacgcgtcgccgagctccggccataaccaaaatctaacgccgccgccccctgtaacaacgacgggagggtggcctagctccgggatatttgacacgagaagttccaacattgatatcaactcatctagaggctag</cdnaseq> |
| Protein Sequence |
<aaseq>MDGKELLSPSELSYYAHQQHQHQHQQHQQQHRMLGGGGGGGGHS ASPLAGMHGGPSVIRPMPNMGMSPTAILQSIGPGPLAGMQFQMDAAPPPPPLMHNSMA SVSASAGAGSPTVPPSATPMEPVKRKRGRPRKYGPDGTMKVSTAAAAQHQQQMLSAPP RMGSVSGADMVGGGSGMDDSAQKKRRGRPPGTGKKQQLSSPVKLSGGNAFSGSAGTSF TPHIITASPSEDVAGKIVAFANHSSRAVCVLSATGSVSRVVLRHPADGAMSRVHASSH YKNPAIYEGLYEILSMSGCYNLMNEGQSDGLSVTLCSPERHIIGGVLGGALVAASTVQ VVLGSFVQGGSKPKSKKAGKQQQQQAAAAAFSSDSLTGGGQDASPSSGHNQNLTPPPP VTTTGGWPSSGIFDTRSSNIDINSSRG</aaseq> |
| Gene Sequence |
<dnaseqindica>3477..3734#2940..3089#2674..2838#2471..2541#1480..2095#atttgatgacgaatcaagtcacaataaaataaataataattacataaatgtttggaataagacgaatggttaaacgttggataaaaaatcaacggtgtcatacattaaaatatgaaatatgaaggtagtatgtgaaagcctgatatgtcaattggttagatttcttgtggtgaaacatgcatcttcaaattcattatattttaattgtaaaaaaaaatctttagagatggttactcttaaaattatcagattttttttgtcacggctaaaatgtaatgaatcttaatatgaattttcgcatatatgtgtagtactattagaaataactgtttatttttttctaattttttatgacatttgctagttggtgtgtgtgagaaacctatatgcatatttttcacttagacacaggagcggagctaggtaggatagggggtgcccaggaacccggttaagaaatttttttaagctatagttcatctattttcaccatatatgcacctccctcaatccaaatttaggcacttatatcagtctaaagtagagtaaaataagtgagtggcagctctcttcatttcgttctagctccgctcctgcttagacatactatctcgatataacaattcaaccaagtcttacgtgaactatgaaccgcccaacacaaaggttcatgagatatccgccgttggtggtcaggtgaggtgaggtgaggtgaagctttgggaagcatcaaccttgaaaaccaagaaaaggtcgtgggcgacagggcgagcgccataaatatctgaaaacatcttgtggagagctgacaggtgggacccgaggggaggtcccgatcggactgtagcgtgggggcggggatcgagtgggcgggtagcgacaggccaccgcccacccagcccatccgcgcgcgtggacgcaaaatggagtggcgcgcgccgaacgaaacggaagccgcagccagcaaattgcaaaggaaggcaaatcacaagcaaatccacccccgcgccgcgccgctcgcgctcggctccgccttttttccctttcgacgtcgttgggccaaggaaacggaaccaaatcttatcgcctccttgtgtgggcgccatccgtccctccgtccgctgcccatctctctctcacgctcgccgtcctcttgtgccttcttggcttgggtttgcctgcgcctgcgcgcgcttggcctagttgcatcgtctgcgttgcggctgctgcgatagcatgtaggccaaccgcgtcatcttatctctctctctctctctctccccccatcatttcatctgatctagtatctcatctcctcctcccctccttttccttctcccccaaccaactcactcttcatcttcaacaccttgctgttcgtcctcgtctcgtcgtgctgattgttcaagaacaggagaaagaaaggaagaagcagtttgattgatctgtttctgttggggggagctcggtgatccatgcatggatggcaaagaactcctctcaccgtccgaactgtcatactatgcgcaccagcagcatcagcatcagcatcagcagcatcagcagcaacaccggatgctcgggggcggaggaggcggcggcgggcatagcgcgtcgccgctcgccgggatgcacggcggcccgtcggtcatccgacccatgcccaacatggggatgagccccaccgcgatcctccagtccatcggcccgggcccgctcgccggcatgcagttccagatggacgccgcgccgccgccgccgccattgatgcacaacagcatggcctccgtctccgcctccgccggcgccggctcacccaccgtgccgccgtccgcgacgcccatggagccggtcaagaggaagcgaggccgcccgcgcaagtacggcccggacgggaccatgaaggtgtccaccgccgccgccgcgcagcaccagcagcagatgctgagcgcgccgccgaggatggggtccgtgtccggcgccgacatggttggcggcggctcagggatggacgactcggcgcagaagaagcggcgcgggcggccgccggggacagggaagaagcagcagctctcatcaccggttaagctttcaggtaagtgaatcaagtgacagtctttatatatgtagagagagggaaagcctctgctttgctctgcactgctctgccacgttgatatttatttaatctttagtggtagatttcctttttgtttgttttgtttactcaaatattgaattctgtcatccatgtgtactttacttagaaaagataaaaaaatatatcatgtgttgttatctttttcagaaaagaaaaacagtatagtattctgtgacttcctaattaattaacttagagaattgcataggcattcctcctacccaaaattgtcctgcaactctataataccaaaaaactttcagactaggaactgtcatgaccttgatgatcgtgtttgtgcttgtgcagggggcaatgcgttcagtggctcagctggaacgagcttcacccctcacatcatcacggcatctccttcagaggtaaataaaaatactcatagctcattcaccgttactacaattttttcatcagcagaaaatgcagagctgcatgcaaactgagaggggaggtaaaactgaactgagctgacaggcgacattgatcattgtcaggacgttgcagggaagatcgtggcgttcgccaaccattcgtccagggcggtgtgcgtgctctcggccaccggctccgtctcccgggtggtcctccgccacccggccgacggcgccatgtcaagggttcacgcctcctcccactacaagaaccctgccatctacgaggtataacaactaattggttggtgcaatgcaatcttggtaagtttaattcagagttgcatgtgacaggagtggatttgatgtttgtgtgtgcattgtggcaggggctgtacgagatcttgagcatgtcggggtgttacaacctgatgaacgaggggcagagcgacgggctgagcgtgacgctgtgcagccccgagaggcatatcattggaggcgttctcggcggagcattggtagctgccagcaccgttcaggtaaccaacccaatgttttaaatagcgggctaagacatttagcggttagcttctcaagcagctatagcagctaaattgtatatgagagcaaatagctataacccttctcaaacagctatagcgggagatttaaaaccctgaaccaacctcatcttttctttttctcctctcctagatggctagatcatcttcatcatcaagattatagtagcattgtctggttgcaaatgtactcactccattaaggccttctttggaagggatgattacatgattcctacaaaattcctcttttccaatcaaagggattctgagttttgatcagaaatgggattcaattctagcattgatcttggtctaacctggggtactcattggcacttgcaggtggtacttgggagtttcgtgcagggagggtcgaagcccaagtcgaagaaggccgggaaacagcagcagcaacaggcggcggcggcggccttcagctcggactcgctgaccggaggagggcaggacgcgtcgccgagctccggccataaccaaaatctaacgccgccgccccctgtaacaacgacgggagggtggcctagctccgggatatttgacacgagaagttccaacattgatatcaactcatctagaggctagcttcatctctcaatttgtcgactcttccatatgtgctccagaaatttgtttttctgattcccaaagaattacccccaaaattgtactcctctctgtaatagcctgttcagtttttgagccgttaattcttatagattattattattcactag</dnaseqindica> |
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