Os05g0161200
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os05g0161200 |
|---|---|
| Description |
DNA polymerase III clamp loader subunit, C-terminal domain containing protein |
| Version |
NM_001061259.1 GI:115462248 GeneID:4337888 |
| Length |
3870 bp |
| Definition |
Oryza sativa Japonica Group Os05g0161200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:3585549..3589418 |
| Sequence Coding Region |
3585618..3586019,3587067..3587999,3588688..3588966,3589066..3589203 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:3585549..3589418 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:3585549..3589418 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgaccgccgcgacgacctccgccgccgcaatccccaccggcggcggcggtcgccggcagcatccccacccgcgccgcccaggcctccgcccgcgccgcctccaccgcctccgcctccctgcccaagcagccgccgcggcggccgcctcttctccatccacgtcgtcgtcgtcgtcgtcgtcgtctactccggcggagggaggagggcggctggtggcggagctggtgggcgcgttcaacgagctgacggggaggatgggggagggcctggccacctcgtcgtcgtcgcgcctcctcttccgcgcgctcaagctcgccctccccgccctccgcgacggcgacggcggccgggctctcgcccgcgcgctcgctatcgccgcctccctcgccgacctccagatggacgccgaagttatttcagccggaatactgagggaagcacttgatgcaggagcaataagcatgagggatgtcaaatctgagattgggatcagcacagctcatttgctgcacgagagtttacggcttaagcatgccccttcaaagcttgatgtacttgatgatgaaagtgcaagtgcattgagaaagttttgtctttcttactatgacatccgagcagttatcttggaacttgctctaaagctcgatatgatgagacaccttgactgcctcccgagatatcttcagcggataaagtctcttgaagtcctgaagatatatgccccacttgcccatgctgttggagctggtaatctatcactggagctagaggatctttcatttcgctatttgtttccgcattcatatgaccatattgatcaatggttgaggagccaagagactgagaacaagctcttaatagattcgtacaaggagcagttgcttcaggcactgaaagatgatgatgagttgagccagattgtgcaagacatctcaattcaagggcggtataaaagccgtttcagtactatgaaaaagctagtaaaagatggcagaaaaccagaagaagtaaatgacatactagctttaagggtaatcttagaacctcggtgtgatggcagctcgttagactggggccctagggcttgtcacaggacacatgaaatcattcaagctatgtggaaagaagttccaggaaggacaaaaaattatgtcacacggccaaaagaaaatggttaccagagcttgcatgtggccatcgatgtaagtgaacctgggaagatgaggccactgatggagatacagatacgaaccaaggagatgcataaatttgctgttggtggagaggcatctcactctctctacaaaggtggacttacagatcctggagaggctaaaaggctgaaggctatcatgttggctgcagcagagttagcagctatgcgtcttcgtgacctcccagctagtgatcaaggagacagcaactgcacgaaccgtgctttctgccagcttgataaaaacggtgatggaaggatcagtattgaggagctcacagaggtgatggaagaccttggtgctgggggcaaagatgctaaggagctcatgcatcttctcgacgcaaacagcgatggctccttgagctccgatgaattcgaagcattccagagacagatcgaactgatgagaagcttggacgacaaagacgatcgctacaggaagatactgaaggagaagctgcagacgattgacagcgcgggtctcattcaggtctaccgcaaacagctgggcgacaaactgcttgtaagctaa</cdnaseq> |
| Protein Sequence |
<aaseq>MATAATTSAAAIPTGGGGRRQHPHPRRPGLRPRRLHRLRLPAQA AAAAAASSPSTSSSSSSSSTPAEGGGRLVAELVGAFNELTGRMGEGLATSSSSRLLFR ALKLALPALRDGDGGRALARALAIAASLADLQMDAEVISAGILREALDAGAISMRDVK SEIGISTAHLLHESLRLKHAPSKLDVLDDESASALRKFCLSYYDIRAVILELALKLDM MRHLDCLPRYLQRIKSLEVLKIYAPLAHAVGAGNLSLELEDLSFRYLFPHSYDHIDQW LRSQETENKLLIDSYKEQLLQALKDDDELSQIVQDISIQGRYKSRFSTMKKLVKDGRK PEEVNDILALRVILEPRCDGSSLDWGPRACHRTHEIIQAMWKEVPGRTKNYVTRPKEN GYQSLHVAIDVSEPGKMRPLMEIQIRTKEMHKFAVGGEASHSLYKGGLTDPGEAKRLK AIMLAAAELAAMRLRDLPASDQGDSNCTNRAFCQLDKNGDGRISIEELTEVMEDLGAG GKDAKELMHLLDANSDGSLSSDEFEAFQRQIELMRSLDDKDDRYRKILKEKLQTIDSA GLIQVYRKQLGDKLLVS</aaseq> |
| Gene Sequence |
<dnaseqindica>70..471#1519..2451#3140..3418#3518..3655#acacaacgagtcaacgaccgccacgtcgcctccaattcatccctcccagtgggccccaccacctcccccatggcgaccgccgcgacgacctccgccgccgcaatccccaccggcggcggcggtcgccggcagcatccccacccgcgccgcccaggcctccgcccgcgccgcctccaccgcctccgcctccctgcccaagcagccgccgcggcggccgcctcttctccatccacgtcgtcgtcgtcgtcgtcgtcgtctactccggcggagggaggagggcggctggtggcggagctggtgggcgcgttcaacgagctgacggggaggatgggggagggcctggccacctcgtcgtcgtcgcgcctcctcttccgcgcgctcaagctcgccctccccgccctccgcgacggcgacggcggccgggctctcgcccgcgcgctcgctatcgccgcctccctcgccgacctccaggtagtttgctcgaatcgaatgattgcatcctgtagctcgacttgccgaattgggtgaaatgcattgcaaatttagtagtttcattcatctcattaagcttagcaatccacatgagttatggtcttatggataaagtagtactagtacctcgatatcatttaaaaccatgtggtgcaactcctctttgcttctagcaaaggataattcatcgtcacataattcccattgtaatcaaaactctggaagcaagatatattttgctgctggtgtggcagtaattgtcatacacacattggctacgattgtcagtttagttttatgttagtacttagtagtaccaattattattgtttgcttcgcagttttcatctgggtgcttatttctaccattaccacaagtacaactagtagaggacattattatcatagctaaactggcattgatgagttagtagtttccattaccagagtaaaaaaatgacattcctaatgactaggacttgttctttttttaaaaaaaaaagataataatgtcggttgtgcagctgtgtgcgactatggaggaggagtggggaatgtggggagctgcgggcttggtgccaggaggaagcttgcagcagtcaaccgagcccttgcagtagtagtggtggtagctcgctgccgggaggtgtcgtctcgcgtttgacgcagcggcaggcagccatgtaaaagtgtgttgctggctttgccggcatgtagctctttgctgtagcttgtaacttgttcttccttttctcttaataaatctcggctggctcttcacgccagcccggcgaaaaaaaagataatattggttaggacttgttacgaaacagctatcccttatttgtcgtttggcttctgtccatgagaattttctaactcttcatttccttgtattgttctggtaattcataagatactttatacttacacttctttgtgtcatagaacagttaagcatctctggtttatttatccactttaaactgtaagatctaaccagttttttttggcacatggtggcagatggacgccgaagttatttcagccggaatactgagggaagcacttgatgcaggagcaataagcatgagggatgtcaaatctgagattgggatcagcacagctcatttgctgcacgagagtttacggcttaagcatgccccttcaaagcttgatgtacttgatgatgaaagtgcaagtgcattgagaaagttttgtctttcttactatgacatccgagcagttatcttggaacttgctctaaagctcgatatgatgagacaccttgactgcctcccgagatatcttcagcggataaagtctcttgaagtcctgaagatatatgccccacttgcccatgctgttggagctggtaatctatcactggagctagaggatctttcatttcgctatttgtttccgcattcatatgaccatattgatcaatggttgaggagccaagagactgagaacaagctcttaatagattcgtacaaggagcagttgcttcaggcactgaaagatgatgatgagttgagccagattgtgcaagacatctcaattcaagggcggtataaaagccgtttcagtactatgaaaaagctagtaaaagatggcagaaaaccagaagaagtaaatgacatactagctttaagggtaatcttagaacctcggtgtgatggcagctcgttagactggggccctagggcttgtcacaggacacatgaaatcattcaagctatgtggaaagaagttccaggaaggacaaaaaattatgtcacacggccaaaagaaaatggttaccagagcttgcatgtggccatcgatgtaagtgaacctgggaagatgaggccactgatggagatacagatacgaaccaaggagatgcataaatttgctgttggtggagaggcatctcactctctctacaaaggtggacttacagatcctggagaggtgagtttcctcattgtcatcactctgtccttttgcaatacaacagagcacatattctttgctttagcaaattactgcaggtagctccccttatattagtaagataagtgtttttactcaaataagttgaaaaatatcaacaaatgtcttcacagtataattagtgcataatatgtttgaactaactgactaacatacaggacatatagtctgtactctgtacagagcctttttacttaaaaatagtcagtagcctattactaattacttcagagcttacaacatagatggcctggtttatgttattagttgatacatgattgattatttgatcctgacccttttaactggaattgtgttgtatatcacttttggataaatccacgccgccactggatttcgtccatatctacaatatgtcattaattgtgaatgacatattgtaattattggatgaacttttgaaaaacttcgctagaaggagagctcgaacctccgaccttatggttaacagccatacgctctagccaattggtcgaccgaatcttttggccgacccggcaaaaaattattggatgaactcagtgaaataaaatctattgccctatgacttataaaagactaaagttatagacaaattatttctagatgacttggaatgatcattcattgaaattcttttctacaggctaaaaggctgaaggctatcatgttggctgcagcagagttagcagctatgcgtcttcgtgacctcccagctagtgatcaaggagacagcaactgcacgaaccgtgctttctgccagcttgataaaaacggtgatggaaggatcagtattgaggagctcacagaggtgatggaagaccttggtgctgggggcaaagatgctaaggagctcatgcatcttctcgacgcaaacagcgatggctccttgagctccgatgaattcgaagcattccagagacaggtaatcacaagctctatatattcacaatgataactgttgaaatgctcttcatttcccgcaaattcttatacatatccttgacacattccgtcttatcagatcgaactgatgagaagcttggacgacaaagacgatcgctacaggaagatactgaaggagaagctgcagacgattgacagcgcgggtctcattcaggtctaccgcaaacagctgggcgacaaactgcttgtaagctaaaactgaagcttagcacaggtgacgaaactaatccaccatcttgctatataggctatggctactatctgtctgcatactgcattcagggtacgctcttattatcattgattatatatatgttcatggagttctacgcaagcctggataagttgtattatttcttgattattttttgtgtggttggattttccacatagcaacaaaaactgtgtggc</dnaseqindica> |
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