Os05g0314100

From RiceWiki
Revision as of 20:07, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0314100

Description

Similar to Small nuclear ribonucleoprotein-like protein

Version

NM_001061703.1 GI:115463136 GeneID:4338385

Length

2500 bp

Definition

Oryza sativa Japonica Group Os05g0314100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:14427497..14429996

Sequence Coding Region

14427754..14427870,14427957..14428061,14429674..14429751,14429861..14429878

Expression

GEO Profiles:Os05g0314100

Genome Context

<gbrowseImage1> name=NC_008398:14427497..14429996 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:14427497..14429996 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggaggaagccactcaggggaagaaggaggaggaggaattcagtacggggccgctgtccgtgctgatgatgagcgtgaagaacaacacccaggtgcttatcaattgccggaacaacaagaagttgcttggtcgtgtgagggcatttgatcgccattgcaacatggttcttgagaatgttagggagatgtggactgaggtaccaaagactggtaaaggcaagaagaaggctcttccagtgaacaaggacaggttcattagcaagatgttcctacgtggggattcggtcatcattgtgctcaggaacccgaaatga</cdnaseq>

Protein Sequence

<aaseq>MAEEATQGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLL GRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLR NPK</aaseq>

Gene Sequence

<dnaseqindica>2127..2243#1936..2040#246..323#119..136#gagtttgccctagccgccgccactcgccgtcgtcgacatcgtctccgctcctgagctccagatccagaggcctctcccgcctccaggctcgccggccgcccgcccgccttcgctgccgatggcggaggaagccactgtaagcggccttcccaaaaccctcgaaagtttcttctctccgttcgcgtggttttctggggaaactactaaccttacctggtctcttgtttcttactctctcctagcagcaggggaagaaggaggaggaggaattcagtacggggccgctgtccgtgctgatgatgagcgtgaagaacaacacccaggttggttggtgctgggattcttcttcttctggagtttgattcagccaaacttctttactgtttactgtggtgtttgctactgttgctttacttgtgggtttcccctagccgggaattcgtttgttctacgtgttcttgccggcagactagccaattagtcaaatatagtttaaaacctagctcagttactctgtttcctcacttagacgtattcttctgcaaaagtacatccttacatgttccaactaattggattgaggggatgaagaatattacaacggtgtcatcatgcctatagaattcttgttccctacctatatgacgtggaatagttagagttgcctcttacccatcccaagtagatcaagttgtccaggatgttagctatgttcataaatccatatcatattagtataatggttatttttaaagattttacatcctcaaactggaaatattgaacaatgttactaacttattaactactagttatcgtgcatgtgcaatgactactacttgatttgatcacttcactatacaaattacacagcgacttgaggtggttttgctctagactgaaggtatttcatagagaaagttcaacatatactttgtagttcttctattaacaatttaacattgaacatatatatgctgtacagggtgatataaggccatctatcaaatcttcgaagaaaattacgtctaaataaaaaataaataactgaaccaaccaaatatccttgagatcttgattatgcagtaaatattagtacttatcgtggagtcctgtataggatttgcttccatactattagctttgcactgcatgcatgtaaaatcattggaaacaaaaataaaataagttcgctaaatttaaccatttttgtgaaaatgtatcactacttttgacacaaactgtgaaagttaatcgatgtaaaaattgaatgtgtgtagaaataagaaaacacagtaacatcatacagcttagtcatacattgtgcagctattgaaaataatgtatgaagtaatcacaagcatatgcacatggctaaaatttatgtacatcattagtaactaaaagtcatcaacacaccgcgatattcaaaatggaagagaaaaatacatctttacatggaattattgaaggaggaataaggaacatcagaatccatgcttatgacttctgaaataaggaagtgcccttctcctgatgggtgaatgaactctggatttctgaaaaaaggaagtgttcttttcctgataggtgaatgaactgtagtttcctcaactctgttagccaataaggatgctctctaagtcccgttatgttaatgaagccttttgaatgtatatgaataattgaccatagtccttctgttgtagtgttagtgtaaatgctgtctttaggagttacctacagcccgttatgttaatgaagccttttgaatgtatatgaataattgaccatagtccttctgttgtagtgttagtgtaaatgttgtctttaggagttgcctacatagttagcccaccataaacggttgttctgactatagttgatgctttgtatgatatgcactgttctgattctatttactcttctttctaggtgcttatcaattgccggaacaacaagaagttgcttggtcgtgtgagggcatttgatcgccattgcaacatggttcttgagaatgttagggagatgtggactgaggtacatggtgttatctgaagttctaaacctttggtccattttccggtcctgctatttttcagtaacatgggtttctcttgctgcaggtaccaaagactggtaaaggcaagaagaaggctcttccagtgaacaaggacaggttcattagcaagatgttcctacgtggggattcggtcatcattgtgctcaggaacccgaaatgagttatatggtcttgtatccaggattgtctctttgctacgtcgctcttagtaatgtccaaacgcctttggctaagattgaccagaatcagctatatttgatggttcagtgttgtagttggagttgttatggattatgaacgtctcttgtatctaagttgcatcgttagcatctgtttgaatcatcaatatattagctgaagacaatttggaactgcactgcttctgtttcgtgttgatttctcactttctgaattgct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0314100, RefSeq:Os05g0314100