Os05g0316000
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os05g0316000 |
|---|---|
| Description |
Zinc finger, RING-type domain containing protein |
| Version |
NM_001061707.1 GI:115463144 GeneID:4338390 |
| Length |
5282 bp |
| Definition |
Oryza sativa Japonica Group Os05g0316000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:14566231..14571512 |
| Sequence Coding Region |
14566308..14566413,14566815..14566918,14567193..14567270,14567389..14567553,14568411..14568499 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:14566231..14571512 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:14566231..14571512 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggagccaccggcgggaggctcctccgatcatcgccggggtgccgggaccggcgcgggcgccggtggggccgcctcgccgtcgggcctccgccgctacggcttcagattctccgcctccagcctcctgcaggccccgctcgctgcgctgctcgagtactccggcgtcgtcccctccggccccggcgccccgcaggcggggccgccctcggcgctgtcgtcctcgccgtcttcttcgtcgtcgtcgtcggaggccgatgggctgctctccgcggccgcggctggggacggggaggtctcgatccggatccagggcggccccggggaggccgacgcggcgggcgtcgcgggggcggcctcgtcgggggaggactcgatcgaggcgaccgccgccggggacgttgacccggcctcggctgccgcggggaggggtggcggcgccgacgcggaggcgagtggtgggggcgcggacggcgcgtccgggaacgggggtggggaccgcgcctaccagcggtatgacgtgcaccatgtcgcgaggtggatcgagcagatactgccattctcgctgctgctgctcgtcgtcttcatacggcagcatctccaaggtttctttgtcacaatttggattgctgctgtaatgttcaagtcaaatgatatattgcggaagcaaactgctttgaagggcgagagaaaaattgctgtgcttgtcgggattacagtaatcttcatgattcatgtgtttggtgtctattggtggtacaggaatgatgatcttctcagacctctgttcatgcttccgccaaaagaaataccgccattttggcatgcgatttttatcatcatggtcaatgatacaatggttcgccaggcagcaatggccattaagtgcatgctacttatgtactataagaatagcagaggtcgtaactaccgtaagcagggtcaaatgctaacccttgtggaataccttctgctcctatatcgtgccttgttgccaactcctgtttggtaccgtttctttctgaacaaggaatatgggagtcttttctcatctttaaccactggactgtacctgaccttcaagttaacttcagtagttgaaaaggttcagtcattcttggctgcagtgaaagcattgtcacgtaaagatgtgcattatgggtcttatgcgacagcagaacaggtaattgctgctggtgatatgtgtgccatctgccaggaaaagatgcatgttcctgtcctcctccgctgtaaacatattttctgtgaggactgtgtctctgaatggtttgagcgagaacggacttgccccctgtgtagagcattggtaaagcctgctgatattcggtcatttggtgatggttctacaagtcttttcttccagttgttttag</cdnaseq> |
| Protein Sequence |
<aaseq>MEPPAGGSSDHRRGAGTGAGAGGAASPSGLRRYGFRFSASSLLQ APLAALLEYSGVVPSGPGAPQAGPPSALSSSPSSSSSSSEADGLLSAAAAGDGEVSIR IQGGPGEADAAGVAGAASSGEDSIEATAAGDVDPASAAAGRGGGADAEASGGGADGAS GNGGGDRAYQRYDVHHVARWIEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVMFKSND ILRKQTALKGERKIAVLVGITVIFMIHVFGVYWWYRNDDLLRPLFMLPPKEIPPFWHA IFIIMVNDTMVRQAAMAIKCMLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTP VWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKVQSFLAAVKALSRKDVHYGSYATA EQVIAAGDMCAICQEKMHVPVLLRCKHIFCEDCVSEWFERERTCPLCRALVKPADIRS FGDGSTSLFFQLF</aaseq> |
| Gene Sequence |
<dnaseqindica>5100..5205#4595..4698#4243..4320#3960..4124#3014..3102#2221..2389#1707..1783#68..671#aggggcctcgtctcctcctcctccgcctccgccttgtagggtttcgccgccgccgctgccgccggcgatggagccaccggcgggaggctcctccgatcatcgccggggtgccgggaccggcgcgggcgccggtggggccgcctcgccgtcgggcctccgccgctacggcttcagattctccgcctccagcctcctgcaggccccgctcgctgcgctgctcgagtactccggcgtcgtcccctccggccccggcgccccgcaggcggggccgccctcggcgctgtcgtcctcgccgtcttcttcgtcgtcgtcgtcggaggccgatgggctgctctccgcggccgcggctggggacggggaggtctcgatccggatccagggcggccccggggaggccgacgcggcgggcgtcgcgggggcggcctcgtcgggggaggactcgatcgaggcgaccgccgccggggacgttgacccggcctcggctgccgcggggaggggtggcggcgccgacgcggaggcgagtggtgggggcgcggacggcgcgtccgggaacgggggtggggaccgcgcctaccagcggtatgacgtgcaccatgtcgcgaggtggatcgagcagatactgccattctcgctgctgctgctcgtcgtcttcatacggcagcatctccaaggtctaatactcattctcttgtgctcgtgccattgtgtgattataagcggtgtgacttgtccaaaacaaaatcgattttccttcatgttgatgtccatatattgtttattacaaatgtttaaccaaaaaaggaaagtgattttgtgagtaaaacaccttgacttaggcgagttaatgtttgtgattaggctggtctatattattattatgtgttaacttaacatctatgttaaccatttgagttcctgggatactattttgtttgttattttttttatcattatggtttagaggataatatgatcacttgattatagtcgacttatctcatatagtgggttttagcctgctttattagatgaacctaatggggagatatttatagcttggtattgctagttagctgccctaactttaaacaggacttgctcaagcccggcttcttatattaggttggaacttctctttgtgctacattatctggaggatattgtggttgggtaccagtcctaactcctaagttatggatcagatgacatatctgcgtttagttgtttaccatgacatgaattttctgctacatgattatctcctagtggtcttgaaatgatgattaagacgcatatatcatatcaggttcttagcttttaacatttattcctttggaggccgcaccaatcaactcataatttatgtgtttatgtgccaaccatttttttggcaaggcctaatgatgatacattaatattccagcagctagttgtatccaattatgcaccgcttcaattacttgcagttcacaatcttggatgttatattcatcttgccttatccattcatactatcctttacttttcaaagtgcatgccctctatcatttctgccactacaaccaaattgtttttttcctgtcaagaaaggtcaatggattgagttaacatataaatccatctttcaattgcatatctatttttgcttgtgcaatgattgccatgtaagcatttcaatacacactaaaggaagggttgttgtgcaggtttctttgtcacaatttggattgctgctgtaatgttcaagtcaaatgatatattgcggaagcaaactgctttgaaggtcttatttcttgatgcatcactttccaattttgcaatgaaattattttagtataacagaatcagaagactactggccagacctttccttctggtgtcataaatttgaatgccaatgactacataacaatataatcatgcattgtactaatgcagtgaacatcacatcattgtgaaatgatgaatttcctgaactacacagcactttattacccagtttggaaagtagtaaagagaataacatttttatctactcttagcttttcctggatcacatttaccattaattaatctagtagcaggttagtcatcctatctctagtaacagttaggtcaacctatgtaccatatttgttgtgaaactagttgaagctacttgttaaattgctaaaatacttgtcaatagcaaatttttcatatttccaactctttttgcagggcgagagaaaaattgctgtgcttgtcgggattacagtaatcttcatgattcatgtgtttggtgtctattggtggtacaggaatgatgatcttctcagacctctgttcatgcttccgccaaaagaaataccgccattttggcatgcgatttttatcatcatggtcaatggtactgatgcttccttaaagggtttcttgaatttgctcgcatgcatttctccattatctgatagtgaactctgaccatatacatagaagtacctttattgacctgctagattaaaatttattgccctttgtaaatgtatgtacaatgagcaattttgtctcgtttttcatatcatgaaaaatcattcaaaatgacctttttttacttcactttctgctgctttttaattcaaggctttgtgttgaactcattagtttctcggtttgtattagcctttcgaattcccagcaaatttaaagatgctcttcagttaaatgtgtgatgaaaactaatcatttaataaatttatttgtacacttagatcattaaatgtgctagaaatttttgaatgcctgaatggcacaaaatttatggtgttcaattcatagtttcaaactgctaaaattacacaggcaacatagatttgttttagccaaaaaaggttcatattagctgtatggcactatcttcatttacttaaagaagtatgttttctaggattgcagggaaaaacattttaagttatctgttagcacaatttatttcatgttgcagttggcatttctaaccaaatgccacttgcagatacaatggttcgccaggcagcaatggccattaagtgcatgctacttatgtactataagaatagcagaggtcgtaactaccgtaagcaggtgacatttttttctaattgtcataaatttattttgtgattttatcatcatgtttatagcatcttgcctttagttgttggttctacctaacttctaatgataatcaatgcagtgattactatgctggttagagattgtagagatctagccaaactagtgaagtgatcgcagccatcaaaattcaaaagtaccaacacttagtatatgtgggtgcttttgtgacagcaccctttctcccacactgaattatctttatttccacatatccaatactgagtatatattgactagaaactaatcataataactgaatgctgaatgatattgtatttctatgctgggctatctttatttaataactgcatgtctatgactatacaattatttttatccccttaagttttgatctactgaattagtctgtgtagcagctcaatgcttagacatcttcaaatgtgtccactagaaaggggttctatatcccaaatacttagctaagaatggtagttttttctccataattctgaaacagtttgaaaaatagtttagtagatgcactaccaaatagtcaagtatacatcatgtattcctatagttctgttggcttcatgtgccatgtgttcgcaagtaacactaggatataacttattttggaaaaaaaacttatgagggtcttttgcatgaagtgactagtttttccattgttactttctttatctttgttattttattttggttctaaaggtgcatgtctcattatcttgaattctagcttatttcttattttagatccttttatagttgcaagcttagtagttggttctgacttctgaggctcaaactttctgttttgctagggtcaaatgctaacccttgtggaataccttctgctcctatatcgtgccttgttgccaactcctgtttggtaccgtttctttctgaacaaggaatatgggagtcttttctcatctttaaccactggactgtacctgaccttcaagttaacttcagtagttgaaaaggtactacttttactagttactgtagctcacatacaaaattagtgctgtgaacctataaaatatatattttttccattccatgcatgcttattttctcattgttgactgtatgttccaggttcagtcattcttggctgcagtgaaagcattgtcacgtaaagatgtgcattatgggtcttatgcgacagcagaacaggtaaacgttcatctactggcaagttgctcaacttaaaaatgcaatatgccataactattgataaatcgtaagcatttgtaggattttgtaatagtacaataagatactatcattttatcgataaaccatacagctttcagccatcaggcttatttgtggagccaactgtccatttaacacgtattcgctagttggtacttggtagcaggatacccccttgaactctcactctatcttgtttaaagaacttgttttttgctggaacctggtgcaggtaattgctgctggtgatatgtgtgccatctgccaggaaaagatgcatgttcctgtcctcctccgctgtaaacatattttctgtgaggactgtgtctctgaatggtaaattcttttcttattttatacttttttacatgctttatttggttctttgggcctttgttttgaattgagcaaggtatcttgttggatatggcaacatattcatgtttattcttaacattggcgtgaagcaatctaagaatggcaattagattttatagtatgagaagaggatgtggagtgatatttctgtggcatcttgtcacagtcttgccttttatatgactactgcttttggtgatgctgcagaagatatattcctaaaatgactaatgagaattcagttgcatgaacataaattccttatcagatgaagtgcctcaatgcttagcttttcctttttttccccttaatttgagcaagtatcaagaaatgacagctttttcctggttctgttttaggtttgagcgagaacggacttgccccctgtgtagagcattggtaaagcctgctgatattcggtcatttggtgatggttctacaagtcttttcttccagttgttttagacaccaaatgggaaactgctaacatataacaatggacaagcaattgcttatgaaaatccaagtgaatcctttttttc</dnaseqindica> 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