Os05g0339000
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os05g0339000 |
|---|---|
| Description |
VHS domain containing protein |
| Version |
NM_001061776.2 GI:297604323 GeneID:4338463 |
| Length |
7018 bp |
| Definition |
Oryza sativa Japonica Group Os05g0339000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:15851221..15858238 |
| Sequence Coding Region |
15856242..15856466,15856555..15856633,15857988..15858094 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:15851221..15858238 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:15851221..15858238 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggcggcggcggtgcgggtagacaaggccacgagcgagctgctgctcggccccgactggaccctcaacatcgacatctgcgacgccgtcaactccgatcacgggcaagcaaaagaggtgattaaagctttgaagaagcgtctccagcacaaaaattcaaaggttcagttttttgctttgacgctattggaaactctaatgaagaattgtggggatcatgtgcattcacaagttgtagagcgtgatatactgcaggagatgatcaaaattgttaagaagaaggtaacattttttccctatggcaattttggggtcatttatctacgcaccactgtaataaaatgccacttgatctttcactgccatgtgttcctacggccttatactagtttgttgggaattttctga</cdnaseq> |
| Protein Sequence |
<aaseq>MAAAAVRVDKATSELLLGPDWTLNIDICDAVNSDHGQAKEVIKA LKKRLQHKNSKVQFFALTLLETLMKNCGDHVHSQVVERDILQEMIKIVKKKVTFFPYG NFGVIYLRTTVIKCHLIFHCHVFLRPYTSLLGIF</aaseq> |
| Gene Sequence |
<dnaseqindica>1773..1997#1606..1684#145..251#ttctctcacctgcttgtttgttcgtctctccctccctccctccctccgactcgcaccgcacccaggccccagcccacgcggggttcggattccctccgccgccacccgcgagagggagacgccggcgccggcgatcggtgaccgatggcggcggcggcggtgcgggtagacaaggccacgagcgagctgctgctcggccccgactggaccctcaacatcgacatctgcgacgccgtcaactccgatcacgggtgtgtcactccccccctcctctctctctctctctctctctctctctcgatgatttagttttgaattcttggttctcgtgcaacccaaaattatggtgtgtaaataatgggaatggaatcctctgcttatttggattttgatcacgatggatggataattcaaggaataagataagtgggtttatctctctctaattacgatcgatatgcgtattagtgttattttttctaagggcgtgggttgatggggcttaaagaatcggttcttgggtatgtgaaaaaaccaacgttaccatcatcatcatctgaaaatgtctcgtgagaaacgggcgaaagcaaatgatcagaagggtgccttttgctccactcgtcgtcaaatcgccagaattttaggatctgatcggttactcctactctcatgatcagtactattcagtagcacatcatcagtatgttcgtttttcttcgttttttcttctttcttttttgacttttgctgttgtggaaaagttgccccttgcttgatcatggcaaatactggatagtacaggcggcgtgaacgatcattttgtcaacagaaaacttgaacttcaaatatcggttcaactagcccttctttaatagaacccacaaatataaaatctgagtcttccttctttataccttttcggtctagttcatttttgtggatggtttcctgttaccagttctcaatttttttttttaaaaaatgcatatgcaacagataaacaagttgagaacatacatggcttttccccctttcaagaatgatgctcatacttcaatgcagcacctgttgtttagactgaaccaggtgtcaatctagacccaacataggcacagatggaccatcttaatctaaattaccttcatccttttgacattattcttttccttaaatattagagagacagacaggaccactgaaccatgatacatgataatgatatctctggttccatgtcacggctagccagcgaagcttaagcggttgaggatgcaggggaatctgatttctgatatacaaatatgatacatgtgtggaataacttgtgcgactgacttgaccaaacatcgcgttgctaattcgtcatcaacaataagttccaaattgtcaggattcaaaacttcaccactatagtagctgaaccaatgttgagaagttcggcttataatctcagtaggaaactccaataggaatagctaattggctatagctgttcatgtttgaatccttctttggaggcttcacaattgaaagtacaaacaatacaaaatatcgtatatcaatgatatactacaagagtaaatggctgagtttaaaataatgcaggcaagcaaaagaggtgattaaagctttgaagaagcgtctccagcacaaaaattcaaaggttcagttttttgctttgacggtatgcttccctgcttaaataacctttatgttctcgaacgtcctctgttatttgtctctgtgagaacaccatgcaattgcttttgcagctattggaaactctaatgaagaattgtggggatcatgtgcattcacaagttgtagagcgtgatatactgcaggagatgatcaaaattgttaagaagaaggtaacattttttccctatggcaattttggggtcatttatctacgcaccactgtaataaaatgccacttgatctttcactgccatgtgttcctacggccttatactagtttgttgggaattttctgaatcaagacattcttggtggtatccatgtgaaattccttttctttggtacatatatggttaaatgttatagctgatgtggcttgattcaacaccaaacctgtctatgagatacattgctgtaatttacattttgcaagatgcatataatcagattataatttttttattcttatccaaagtctacatgaatacttccccgcaaaataaaggtctaaatgaatactattaaaatcactcatcacatagctgcaagacttagaaatagtgatttatctctgagttattgaacaagcaggaaccgaatagtcatgggagaatcatactccttgaactttcaatttttcatggggagcaaatattcttttcaataacatcgcatgatctgttttttatttggcgtttttatccattcatctaatctttgctctcacaggaaactttatacatgctaataatttactgttgggaccattggtaataatatttggataactgaatcatcacatacaaactagatctttctgagacttgaggtccttaatttgaaagatctttcagccggcttatgccggcccgacaaaaataattttgaagatcttttacttttaactttcttcatttcgccatgctgatctaattttttttagtcatggctgttttcagactgatatgcagttgagggacaaaattctagtactccttgaatcttggcaagaagcatttggtgggaatggtgggaagcatccccagtactactgggcatatgctgaaatgaaggtctgttcaatatgtcatgaactgttgtcatgctacatgggaattatttatgctgccttttaaagggattcctgtgactacattttgattttagataacctgcagcttgatgacttgattatttaattgttatactgtcaaattttaaccacaagtgtaaaagttcaatgagtttatggtactaatacaattaatgtttgaggttagtttaacttggatttttctttgcaccttcattgtctggctcctgtcaggataactattttgtgtggtatttatcataagttaaacacatgattaactaccaaatggacgacttcataaaatctttgaaatacatccctgtatgaaaaatacttttcatgacaactaatagtagaatactacaattttctataatagcactcaaagttaaagaagcttgattatgaggaatctaaaattccatacatgtatgaatagatttagaatgagttagagacgacaacagttagtttccttataagattgattcatttcccttgtctaggattgtttcttaggtgtctaagacaagagggataatgtgcattattatcaatcaaggaataattgttgatccttttctcaaagttcaattatcagcctttatggtcctatgttctccatccctcccctttagccatgctattatatggccatcttttgcacaatagctaccctgatatgaaccaagagaggatccatgctttacaatttgttcatgtttacaatatatatcaatattatacctatatggaaaccttcagataaatgaagttgtatcattgttctattctattctggaacattattttcgcacaaatcaatgagtatctttatctgcagaaattgggcttggaatttcctcggcgatcacctgatgctgcaccaatacttactcctccaatcacacgcccaacatctttggaatcttatcatcaaccaagttacggaatgccagttaattcttcctctagatttgatgaggcaatgccatctaacgggccttccctgaggtgacatcattttaatatgttttattaatggaaatactattccttttctctcccatgttgtatgacaattaatttttctttagttcatcggagatggaacgcatgttaggtgctgttgaactattaagcgagatgctgaaagcagtgaatccacatgatcgtggggtatgacatgtgatgtctatttgatgatttcttgtccctattttattttaatgttaaaaagggtcatcgttattatcagatcaacagtttcagttttttactgtagaatccttggctgccatgtaccttccttttaacttggtgttgaagaccaagtgatttttttattgctctttttctgaaactaaaaacctttttggcaatgtaggctgtcaacgatgaaattatcacagagcttgtgaaacaatgccggtcagaccagaaaaagataataagtttggtaacttcattaaggtatatacttctataaacactctgccctgcatatttactctgttatcttttcagattggacagttccattgatttggtgatgtcatcttttgctgttaggatgctggaagttgctatttgattccaaagtagaactaacacacatgaatctacctactttagagtataaatgtatgaagctaggcgtgaataaaatttgattggtttgcaatgcatacaaagtgaggaaaagaacagagcaacatcttaaaatcctgggtctacagaacatcttctagccattttgttcataaaaacctgaaggagaatagataataaaattattctcattcatgtataagatggactctatacgatattatatggatctagtagccatgcgacttggttagatgaagctatgcataatggctacgaaaaattaaaaattaaaaagttaaaagttgtgtattgcttgaaagttctgctgcatgaactgaaagcttgtgaccttatgactcattcataagaatatgatgtaacctattgagtttgcctacaacaacaaggcaccataatttcactcagtactcacacacccttggcctgctgccaaccatgcttccccaaattctagcactcgttaagcctctattagactattaccatgccccaccagatttttaagagggaggggttcaggtaactataaaactgtatatttagttttcctgctggaagcctgggaggtgttgttcccacttttttttagagacataaatattctccaaggagatgattttacttttttgttttgtttagagattttttagggatgtggaagagggagggaatagagaatgagccaccagtttcctttgaaaattgtttaaatatatacattattctttttattttggtgttattatcattgtctcaagttcatctgctgcattattacagagatgaggagctcttgggccaagctcttgacttgaatgataggatgcagattctgcttggcaaacatgatgcaattgcatcaggttctcctctaccagatgaagaaacagatatcatgaatgaatcatcagcagaaacaacttcaactccagtggcaacaggggctcctcgagctgcagttgctgctatagtaccaactaatgttttcgatgaagaggaggaagatgaagatgacgagttctctcagctcgctcgcaggttgttctgattgccgacaatattcttgtttcctacccatttatccttgaaatcatccagacctgagtcaatcttgtgatcaggaattcgaaattcaggtctacaaatgctgagagcaccccttctggcgtagcaacatctttgtcgaccgcccatgacgatgagataacaagttcaggatcttctggtacctctacagtttcaccacctgttcaaagccatgcattggcactgcctgatcctccagctcctgttagaactgcagaagagcaagttatgagtgaccttcttgcactcaccatatcaaacccttcaccacctcaaactccaccaacacctgaagctaccaccaccatgaaccaaggtggctcgcaagccaatgatcatccacaacctagttactcaaaccaaggacttgctgctgcatcatacaacagctatgttgctccttgggctcagcctcaatgtcaaactccaggcattcagcttcagcagcatcaacaaccatcccagtcacaattgccctacaactcatctccctacccgccaccgccatgggcatcggaggacaccgccgagtccaaccctttcattgcagcttcactgaagaaccaacctacttccgcctcgccggttaatgtaccactgaatttgaggcctctacagcaatcaaattctttcggggttccgcttcgaagtgccgggccacaatcgccgataaacgggagcactaagcaaccgatgtctgcaggagctcgcaggccatcttatgtttcttctaacaaatacttcgatgatctgtttgagaaaaatgctgatggcagcctgatgaaggtgggcggtagcgttggtgggggcgcatcctcgccatacaagacataattctgagatttctgacacaggaatattaaactgttgggagtagtctatctgcgaacattactttgcttgtcttgagctctgatttgtggtcagattatctgtgaagatttctctcgccatgccagattgatttggttggtgcttctgaaaggcatgctggccagttgataaataatttatgccaaaaaacaagatatataatgcatcagtctctgtcatggagatttcttgaatggtaaaacctgactttatgcatcatagaagatatcatacttaagcgttttctttgtttactatatggaagtttcagtgtgcaattttacccatgtttcagaagaatcgctgaccagcagaaggttcacacaattctgaaccgagtcaggccatagccacaacaactctgcccttcccaacatcttcagcaaaattcggagatggtaaccgttggagcagcatgattcagccaggcatgcagatgaagatcataggcaaattagcttgcacaattctcctcaacgaagaagatggaaatacactaccgataatacattgatcacacaacctctgtgatagtatgatcttgatcatgtcagcagtttattttgtaatgtacagagctctgaagatgttcatggtcatggcagccatggctgtgtctacttgccg</dnaseqindica> 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