Os05g0389800
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os05g0389800 |
|---|---|
| Description |
Similar to ATP-dependent helicase DHX8 (RNA helicase HRH1) (DEAH-box protein 8) |
| Version |
NM_001061972.1 GI:115463674 GeneID:4338675 |
| Length |
3427 bp |
| Definition |
Oryza sativa Japonica Group Os05g0389800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:18879176..18882602 |
| Sequence Coding Region |
18879257..18882469 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:18879176..18882602 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:18879176..18882602 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggcgagcgatgatggccagctcaggacgtgggtctccgaccgcctcatggcgctcctcggatactcccagggcctcgtggcgcggcttgtcgtccgcctcgcgcgggagtgcgcctccgcgggtgacctcgcggcgcggctcgtcgacctcgccgggttcccgccttcccccgacaccgccgcgttcgccgaggacgtgtacgggagggtgccccgcagttgcggcggcggcggcgacgacgccggggtcagcgagtaccagaggcagatgcaggaggctgcggcgatggccaagaagcagagcaccatcaagctgctcgacgacgacggcgagatcggcgtttccgcgtcgccctccagcggcggcaggaagcgtttcaggaggaaggccgtgggcgaagacgatgacgatgccggacggaacgcgcgacggcggcgtagcccggacgacgaggaggaggacggcgacgccggcgaggaagaagagatggagcgggatcagatcgagagggcgcagctcgagcggaacatcagggagcgcgacgcggcgagcacgaggaggctgacggatcggaagacgaccaagcgggagcagggcgagctcgcgcgccggtcggacgccatggacaagaacgacacctcggggctcaggaggctctcccggcgcgcgtacctgcagaggcggaaggagaagaaggtcgaggagatgcgcgacgagatcgtcgaccacgagttcctcttccccggcgtccagctgacggccgccgaggagagggacatgaggcacaagaagcaagtctacggcctcgtgcacgatcgcgacgactactacagaatgccggacgcctacgacgccgccgcgaacgtcgatcaggagaagaggttctcggtggcgcggcggcggtacgaggagccagctgaggcggcgagggacggcaagacggcgaacgccttgtccgagcaggaggcctgggaggagcagcagatacggaagtcgaggctgcagttcggatccatggatcgcggccggcgcggcgacgagtacgagctcctgttcgacgacggcgtcgagttcgtcaggtcgacggtgatggcgggcaccgcgcctgcagacgacgacgacacggcggcggcggcggcggccgacgagtaccatgccgaggccatggatgccaaggccacgttgcaagacgagaggaagactctcccggtgtacaagctcaaggacgacctgctcaaggccatcgacgagcacaaggtcctgatcgtcgtcggcgagaccggctccggcaagacgacgcagataccgcagtacctccacgaggtcgggtacacggcgggggggaggaagaaggtggcgtgcacgcagccgcggcgcgtggcggcgatgagcgtggcggcgagggtggcggaggagatgggcgtcaagctcgggcacgaggtcggctactccatccggttcgaggactgcacgtcggagaagacggtgatcaagtacatgaccgacgggatgctcctccgcgagttcctcggcgagcccgacctgggcagctacagcgtcgtcgtcgtcgacgaggcccacgagcggacgctcgccaccgacatcctcttcggcctcgtcaaggacatcgcccgcctccgccctgacatgaagctgctcatctccagcgcgacgctcaacgccgacaagttcagcgacttcttcgacgcggcgcccgtcttccggatccccgggcggcggttcgaggtgggcatccactacaccgtggcgccggaggcggactacatcgacgccgccgtcgtgacggtgctgcagctgcacgtcacggagccccccggcggcggcgacatcctgctgttcctcacggggcaggaggagatcgagacggtggaggagatcctgaggcatcggctgcgggtgctcggcggcaaggtggcggagctggtgatctgccccatctacgccaacctccccgccgagctgcaggccaagatcttcgagccggcgccggcgggcgcgcgcaaggtggtgctcgccaccaacatcgccgagacgtcgctgaccatcgacgggatcaagtacgtggtcgacccggggttctgcaaggtgaagtcgtacaacccgcgcaccgggatggagtcgctgttggtggcgccggtgtcgagggcgtcggcggagcagcgcgccggccggtcggggcgcaccgggccgggcgagtgcttccggctctacacggagtacaacttcgtcagcgacctcgacgacgacgcggtgccggagatccagcggagcaacctcgccagcgtcgtgctggcgctcaaggcgctcgggatcaacgacctcgtcggcttcgacttcatggacccgccgccggcggagtcgctgctcagggcgctggaggagctcttcgccctcggcgcgctcaacagccgcggcgagctcaccaagaccgggaggaggatggcggagttccccctggaccccatgctctccaaggccatcgtcgcgtcggagaggtacgggtgctccgaggaggtgatcaccatcgcggccatgctgtccgccgggaacgccgtcttctaccgcccaagggacaagcgggtccacgccgacgccgcacggcgggcgttccacgccggcaacgccggcgaccacgtcgcgctgctcaacgtgtacaacgcgtgggcggagtccggctactcgccgcagtggtgccgcgagagcttcgtgcagcaccgcaccatgcggcgcgcgcgggacgtgcgggaccagctgggggcgctgcttgagcgggtggagatcgcgccgtgctcctccgccggcggcggcgacctcgacgcggtcaggaaggcggtcacggcgggctacttccgccacgctgcgcggctgcagagggacgggtcgtaccgcgccgtgaagagccggcagacggtgttcgtccacccgagctccggggtggcgcaggcgccgccgcggtgggcgttgtaccacgagctggtgctcacgaccaaggagtacatgaggcaggtgacggagctcaagccggagtggctggtggagatcgcgccgcactactacgagcgcaaggacgtcgacgagcctgagcccaagaagacggcggcggcgactacgccgcaagagcagacgacggccggctctacaccaacgaagcagactccgaatctgaatagtttcttcgacgtgtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MAASDDGQLRTWVSDRLMALLGYSQGLVARLVVRLARECASAGD LAARLVDLAGFPPSPDTAAFAEDVYGRVPRSCGGGGDDAGVSEYQRQMQEAAAMAKKQ STIKLLDDDGEIGVSASPSSGGRKRFRRKAVGEDDDDAGRNARRRRSPDDEEEDGDAG EEEEMERDQIERAQLERNIRERDAASTRRLTDRKTTKREQGELARRSDAMDKNDTSGL RRLSRRAYLQRRKEKKVEEMRDEIVDHEFLFPGVQLTAAEERDMRHKKQVYGLVHDRD DYYRMPDAYDAAANVDQEKRFSVARRRYEEPAEAARDGKTANALSEQEAWEEQQIRKS RLQFGSMDRGRRGDEYELLFDDGVEFVRSTVMAGTAPADDDDTAAAAAADEYHAEAMD AKATLQDERKTLPVYKLKDDLLKAIDEHKVLIVVGETGSGKTTQIPQYLHEVGYTAGG RKKVACTQPRRVAAMSVAARVAEEMGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLL REFLGEPDLGSYSVVVVDEAHERTLATDILFGLVKDIARLRPDMKLLISSATLNADKF SDFFDAAPVFRIPGRRFEVGIHYTVAPEADYIDAAVVTVLQLHVTEPPGGGDILLFLT GQEEIETVEEILRHRLRVLGGKVAELVICPIYANLPAELQAKIFEPAPAGARKVVLAT NIAETSLTIDGIKYVVDPGFCKVKSYNPRTGMESLLVAPVSRASAEQRAGRSGRTGPG ECFRLYTEYNFVSDLDDDAVPEIQRSNLASVVLALKALGINDLVGFDFMDPPPAESLL RALEELFALGALNSRGELTKTGRRMAEFPLDPMLSKAIVASERYGCSEEVITIAAMLS AGNAVFYRPRDKRVHADAARRAFHAGNAGDHVALLNVYNAWAESGYSPQWCRESFVQH RTMRRARDVRDQLGALLERVEIAPCSSAGGGDLDAVRKAVTAGYFRHAARLQRDGSYR AVKSRQTVFVHPSSGVAQAPPRWALYHELVLTTKEYMRQVTELKPEWLVEIAPHYYER KDVDEPEPKKTAAATTPQEQTTAGSTPTKQTPNLNSFFDV</aaseq> |
| Gene Sequence |
<dnaseqindica>134..3346#acgcacggataaagcggccttggccgcaccaccgaccggcgaccacaaagcccaagcccgtaacccccttcgataccgcctctcgcggcaccgccgcgccgccgccgcaaacgaggctacggaggccgaggccatggcggcgagcgatgatggccagctcaggacgtgggtctccgaccgcctcatggcgctcctcggatactcccagggcctcgtggcgcggcttgtcgtccgcctcgcgcgggagtgcgcctccgcgggtgacctcgcggcgcggctcgtcgacctcgccgggttcccgccttcccccgacaccgccgcgttcgccgaggacgtgtacgggagggtgccccgcagttgcggcggcggcggcgacgacgccggggtcagcgagtaccagaggcagatgcaggaggctgcggcgatggccaagaagcagagcaccatcaagctgctcgacgacgacggcgagatcggcgtttccgcgtcgccctccagcggcggcaggaagcgtttcaggaggaaggccgtgggcgaagacgatgacgatgccggacggaacgcgcgacggcggcgtagcccggacgacgaggaggaggacggcgacgccggcgaggaagaagagatggagcgggatcagatcgagagggcgcagctcgagcggaacatcagggagcgcgacgcggcgagcacgaggaggctgacggatcggaagacgaccaagcgggagcagggcgagctcgcgcgccggtcggacgccatggacaagaacgacacctcggggctcaggaggctctcccggcgcgcgtacctgcagaggcggaaggagaagaaggtcgaggagatgcgcgacgagatcgtcgaccacgagttcctcttccccggcgtccagctgacggccgccgaggagagggacatgaggcacaagaagcaagtctacggcctcgtgcacgatcgcgacgactactacagaatgccggacgcctacgacgccgccgcgaacgtcgatcaggagaagaggttctcggtggcgcggcggcggtacgaggagccagctgaggcggcgagggacggcaagacggcgaacgccttgtccgagcaggaggcctgggaggagcagcagatacggaagtcgaggctgcagttcggatccatggatcgcggccggcgcggcgacgagtacgagctcctgttcgacgacggcgtcgagttcgtcaggtcgacggtgatggcgggcaccgcgcctgcagacgacgacgacacggcggcggcggcggcggccgacgagtaccatgccgaggccatggatgccaaggccacgttgcaagacgagaggaagactctcccggtgtacaagctcaaggacgacctgctcaaggccatcgacgagcacaaggtcctgatcgtcgtcggcgagaccggctccggcaagacgacgcagataccgcagtacctccacgaggtcgggtacacggcgggggggaggaagaaggtggcgtgcacgcagccgcggcgcgtggcggcgatgagcgtggcggcgagggtggcggaggagatgggcgtcaagctcgggcacgaggtcggctactccatccggttcgaggactgcacgtcggagaagacggtgatcaagtacatgaccgacgggatgctcctccgcgagttcctcggcgagcccgacctgggcagctacagcgtcgtcgtcgtcgacgaggcccacgagcggacgctcgccaccgacatcctcttcggcctcgtcaaggacatcgcccgcctccgccctgacatgaagctgctcatctccagcgcgacgctcaacgccgacaagttcagcgacttcttcgacgcggcgcccgtcttccggatccccgggcggcggttcgaggtgggcatccactacaccgtggcgccggaggcggactacatcgacgccgccgtcgtgacggtgctgcagctgcacgtcacggagccccccggcggcggcgacatcctgctgttcctcacggggcaggaggagatcgagacggtggaggagatcctgaggcatcggctgcgggtgctcggcggcaaggtggcggagctggtgatctgccccatctacgccaacctccccgccgagctgcaggccaagatcttcgagccggcgccggcgggcgcgcgcaaggtggtgctcgccaccaacatcgccgagacgtcgctgaccatcgacgggatcaagtacgtggtcgacccggggttctgcaaggtgaagtcgtacaacccgcgcaccgggatggagtcgctgttggtggcgccggtgtcgagggcgtcggcggagcagcgcgccggccggtcggggcgcaccgggccgggcgagtgcttccggctctacacggagtacaacttcgtcagcgacctcgacgacgacgcggtgccggagatccagcggagcaacctcgccagcgtcgtgctggcgctcaaggcgctcgggatcaacgacctcgtcggcttcgacttcatggacccgccgccggcggagtcgctgctcagggcgctggaggagctcttcgccctcggcgcgctcaacagccgcggcgagctcaccaagaccgggaggaggatggcggagttccccctggaccccatgctctccaaggccatcgtcgcgtcggagaggtacgggtgctccgaggaggtgatcaccatcgcggccatgctgtccgccgggaacgccgtcttctaccgcccaagggacaagcgggtccacgccgacgccgcacggcgggcgttccacgccggcaacgccggcgaccacgtcgcgctgctcaacgtgtacaacgcgtgggcggagtccggctactcgccgcagtggtgccgcgagagcttcgtgcagcaccgcaccatgcggcgcgcgcgggacgtgcgggaccagctgggggcgctgcttgagcgggtggagatcgcgccgtgctcctccgccggcggcggcgacctcgacgcggtcaggaaggcggtcacggcgggctacttccgccacgctgcgcggctgcagagggacgggtcgtaccgcgccgtgaagagccggcagacggtgttcgtccacccgagctccggggtggcgcaggcgccgccgcggtgggcgttgtaccacgagctggtgctcacgaccaaggagtacatgaggcaggtgacggagctcaagccggagtggctggtggagatcgcgccgcactactacgagcgcaaggacgtcgacgagcctgagcccaagaagacggcggcggcgactacgccgcaagagcagacgacggccggctctacaccaacgaagcagactccgaatctgaatagtttcttcgacgtgtaaagagtgccattggaacttgtaaatagctgtaattataccaaactaacaagtgaaaagttcaagacaatttgtttgttgctc</dnaseqindica> |
| External Link(s) |
