Os05g0435100

From RiceWiki
Revision as of 20:10, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0435100

Description

Protein of unknown function DUF1218 family protein

Version

NM_001062176.2 GI:297604571 GeneID:4338894

Length

1087 bp

Definition

Oryza sativa Japonica Group Os05g0435100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21312910..21313996

Sequence Coding Region

21312910..21313005,21313145..21313347,21313549..21313627,21313652..21313996

Expression

GEO Profiles:Os05g0435100

Genome Context

<gbrowseImage1> name=NC_008398:21312910..21313996 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:21312910..21313996 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaagacggtggccatcgtgtcggcgatcgtcgggcccctgggggtgctgagcgccatcctggggttctccgccgagggcacaaagatcattatttcggacgtattgctgatcggcgacgagtgcctgtacccacagaacccgtcgttcgcgctggggatctgcgcggccatcttccttctgatggcgcagatcaccgtgacggccgtcggcggctgctgcggctgctgcaagtcccgcgccatcccgtccgagaccaagcggatcgtcggcatcgtctgcgccgtcgtctcatggatagcggcgggggtcgcgtgggtgctgttcgtggtgggcgcggcgtggaacgccaacgtggcgagggacacggcgccggacggcatcttcgcgggcgcggccgtgctggccctcgccgccacggcgctcgggatcgcctcctacgtcacgctccgcgggcaacgcaacgaggcagtacggacgccaaagccgggagagcagcagccgacgccggcggccgggatcgcgatgggccacccggccgcccagttgtctcctcctgtttctgccccgccggcgccgccacagcaaggaggggacggacgagcactgaacccgcagccgcaggtcgctgccgcttttcctgctcctgctcaagtcggatcgcacgcgccggatcagccgttgcctcctcatcctcctccaggggatgctcaggtgtag</cdnaseq>

Protein Sequence

<aaseq>MDKTVAIVSAIVGPLGVLSAILGFSAEGTKIIISDVLLIGDECL YPQNPSFALGICAAIFLLMAQITVTAVGGCCGCCKSRAIPSETKRIVGIVCAVVSWIA AGVAWVLFVVGAAWNANVARDTAPDGIFAGAAVLALAATALGIASYVTLRGQRNEAVR TPKPGEQQPTPAAGIAMGHPAAQLSPPVSAPPAPPQQGGDGRALNPQPQVAAAFPAPA QVGSHAPDQPLPPHPPPGDAQV</aaseq>

Gene Sequence

<dnaseqindica>1..96#236..438#640..718#743..1087#atggacaagacggtggccatcgtgtcggcgatcgtcgggcccctgggggtgctgagcgccatcctggggttctccgccgagggcacaaagatcattgtgagcatactgcgctaagatgcatgcatgttctttagatatctccgttctctgatatacatgtgatgactgatgagcgtaattagtgattagtgactccagtgagcatgcgtgacaaacggggaatgatttgttgcagatttcggacgtattgctgatcggcgacgagtgcctgtacccacagaacccgtcgttcgcgctggggatctgcgcggccatcttccttctgatggcgcagatcaccgtgacggccgtcggcggctgctgcggctgctgcaagtcccgcgccatcccgtccgagaccaagcggatcgtcggcatcgtctgcgccgtcgtctcatggtacatgatgcaaccggccgccgatcccacaagccggccaccgtgtcaccgtcgtcgtctcattgtttcaacggttgatacaatgctaactgcacaaccgtgactttggagccaaagtcagaggatccgcttcccgtttggttatatcgatcacctcgtgcgtacgtagctgatcgcgtggggccgtacgtgtacgtgcaggatagcggcgggggtcgcgtgggtgctgttcgtggtgggcgcggcgtggaacgccaacgtggcgagggacacggcgccggtgtgctagtgctacgtcctcaaggacggcatcttcgcgggcgcggccgtgctggccctcgccgccacggcgctcgggatcgcctcctacgtcacgctccgcgggcaacgcaacgaggcagtacggacgccaaagccgggagagcagcagccgacgccggcggccgggatcgcgatgggccacccggccgcccagttgtctcctcctgtttctgccccgccggcgccgccacagcaaggaggggacggacgagcactgaacccgcagccgcaggtcgctgccgcttttcctgctcctgctcaagtcggatcgcacgcgccggatcagccgttgcctcctcatcctcctccaggggatgctcaggtgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0435100, RefSeq:Os05g0435100