Os05g0502000
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os05g0502000 |
|---|---|
| Description |
Similar to Cyclic nucleotide-gated ion channel 4 (AtCNGC4) (Cyclic nucleotide-and calmodulin-regulated ion channel 4) (AtHLM1) |
| Version |
NM_001062508.1 GI:115464746 GeneID:4339240 |
| Length |
4366 bp |
| Definition |
Oryza sativa Japonica Group Os05g0502000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:24759265..24763630 |
| Sequence Coding Region |
24759265..24759852,24760958..24761173,24761265..24761590,24762255..24762687,24763118..24763630 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:24759265..24763630 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:24759265..24763630 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcaggcgagctctccacgcgcgcgtcgacctcctcgtcgagcagctcccctcccggcgacgcgcgggggccggaacatggagggacgccgcgtggcgaggtgtcgtccaagcgccgtctggtgctgcggcggcggcagcggtggcggcgtctcggcggcggcgccgcggcgtcgtgggcggcggcggacccgcgggcgaggtgggtcagggagtggaaccgcgcgtacctgctggcctgcgcggcggggctcatggtggacccgctgttcctgtacgccgtgtcgctgagcgggccgctcatgtgcgtcttcctcgacggctggctcgccgccgcggtcaccgcgctccggtgcatggtggacgccatgcacgcgtggaacatcgtgacgcagctccgcgtctcgcgcgccgggcgggagcgggcgtgcgccgccggccccgacgaggagcagcctgaggctgaggccgcggcgccggcgccggcggcggacgcggacgccgccgcgagcaacaagctccgtgaccacgggaggtacaggaaatggttggtgctggatttcttcgtcattctccccgtgatgcaggtggtggtttgggtggcggcgccggcgatgatacgggcggggtcgacgacggcggtgatgacggtgatgctggtggcgttcatgttggagtacctgccaaagatctaccactccgtcgtcttcctccgccggatgcagaaccagtccggccacatcttcggcaccatctggtggggcatcgccctcaacctcatagcctacttcgtcgccgctcacgcggtgggcgcgtgctggtacttgctgggggtccagagggccaccaagtgcctgaaggagcagtgcttgcttgccgggctgccggcgtgcgcgtcgtccacggcggcggtggcgtgcgtcgacccgctgtactacggcgccgccgtggcgtccgtcggcggcgaccggctcgcctggggcgggaacgcgacggccaggaacgtgtgcctcagcagcggcgacaactaccagtatggcgcgtacaagtggaccgtcatgctcgtctccaaccccagccgcctcgagaagatgctcctccccatcttctggggcctcatgaccctcagcacgtttgggaatctggagagcacgacggagtgggtggagatcgtgttcaacataatgacgatcacggggggcctgatcctggtgacgatgctgatcgggaacatcaaggtgttcctgaacgcgacgacgtcgaagaagcaggcgatgcagacgcggctgcgcgggctggagtggtggatggagcacaagggggtgccgcacgggttccggcagcgggtgcggcagttcgagcggcagcggtgggcggcgacgcgcggggtggacgagtgccagatcgtccgcgacctccccgagggcctccgccgcgacatcaagtaccacctctgcctcgacctcgtccgccaggtccccctcttccaccacatggacgacctcgtcctcgagaacatctgcgaccgcgtcaagtccctcatcttccccaagggcgagatcattgtgagagaaggggacccggtgcagaggatgctgttcatagtgagggggcacctgcagtgcagccaggtgatgaggaacggggcgacgagctggtgcacgctggggccggggaacttcagcggggacgagctgctgtcgtggtgcatgaggcggccgttcatggagcggctgccggcgtcgtcgtcgacgctggtgacggcggagagcacggaggcgttcgggctggaggccggcgacgtcaagtacgtgacgcagcacttccggtacaccttcaccagcgacaaggtgcggcgcagcgcgcggtactactcccacgggtggcggacgtgggcggccgtcgccgtgcagctcgcgtggcggcggtacaagcaccgcaagacgctcgcctcgctctccttcatccgcccgcgcaggccgctctcgcggtgctcgtccctcggggaggagaagctcaggctctacaccgccatcctcacctcccccaagcccaaccaggacgacgacttctaa</cdnaseq> |
| Protein Sequence |
<aaseq>MSGELSTRASTSSSSSSPPGDARGPEHGGTPRGEVSSKRRLVLR RRQRWRRLGGGAAASWAAADPRARWVREWNRAYLLACAAGLMVDPLFLYAVSLSGPLM CVFLDGWLAAAVTALRCMVDAMHAWNIVTQLRVSRAGRERACAAGPDEEQPEAEAAAP APAADADAAASNKLRDHGRYRKWLVLDFFVILPVMQVVVWVAAPAMIRAGSTTAVMTV MLVAFMLEYLPKIYHSVVFLRRMQNQSGHIFGTIWWGIALNLIAYFVAAHAVGACWYL LGVQRATKCLKEQCLLAGLPACASSTAAVACVDPLYYGAAVASVGGDRLAWGGNATAR NVCLSSGDNYQYGAYKWTVMLVSNPSRLEKMLLPIFWGLMTLSTFGNLESTTEWVEIV FNIMTITGGLILVTMLIGNIKVFLNATTSKKQAMQTRLRGLEWWMEHKGVPHGFRQRV RQFERQRWAATRGVDECQIVRDLPEGLRRDIKYHLCLDLVRQVPLFHHMDDLVLENIC DRVKSLIFPKGEIIVREGDPVQRMLFIVRGHLQCSQVMRNGATSWCTLGPGNFSGDEL LSWCMRRPFMERLPASSSTLVTAESTEAFGLEAGDVKYVTQHFRYTFTSDKVRRSARY YSHGWRTWAAVAVQLAWRRYKHRKTLASLSFIRPRRPLSRCSSLGEEKLRLYTAILTS PKPNQDDDF</aaseq> |
| Gene Sequence |
<dnaseqindica>1..588#1694..1909#2001..2326#2991..3423#3854..4366#atgtcaggcgagctctccacgcgcgcgtcgacctcctcgtcgagcagctcccctcccggcgacgcgcgggggccggaacatggagggacgccgcgtggcgaggtgtcgtccaagcgccgtctggtgctgcggcggcggcagcggtggcggcgtctcggcggcggcgccgcggcgtcgtgggcggcggcggacccgcgggcgaggtgggtcagggagtggaaccgcgcgtacctgctggcctgcgcggcggggctcatggtggacccgctgttcctgtacgccgtgtcgctgagcgggccgctcatgtgcgtcttcctcgacggctggctcgccgccgcggtcaccgcgctccggtgcatggtggacgccatgcacgcgtggaacatcgtgacgcagctccgcgtctcgcgcgccgggcgggagcgggcgtgcgccgccggccccgacgaggagcagcctgaggctgaggccgcggcgccggcgccggcggcggacgcggacgccgccgcgagcaacaagctccgtgaccacgggaggtacaggaaatggttggtgctggatttcttcgtcattctccccgtgatgcaggtgggcaaatcgatccatttacaaggctctcttgcaaatatgttcctgtagtttttatggtgttaatcatgtctactattagtccagtaatcagtatcagtatcaatttttttttctaaaaaaaaatcgtccgttcaaatcctattttctagtatgccattttgcagcagaggtgtagaactttaacttctgcagtatttaattttgttttagtttgtagggattttttttttgatattagtttgtagggattcacctaaatgtaatttatatttgatcttgctcaacagtcaacacgggtaacgaatggctcactcactgtgcgtgtctttacgtgacaactcgccgtgtccaaaataccagtacagtacgcagcttgtagctattagctagctttgcaaattattgcagtcatttcactagacggctcttaactgattaagctcaacgatcgcatgagctctgtgcacagcaacgtgcccggtccgtccatatcgatcgatcagtctcgatctgtcgatgaacagacgaacgagcgagcagtgcagggtatagggaattcattcgttctgtttctgctggcagctttgtcccaatgcacattattcgtctatctgctacagcatgtgcccttcatggatagctagtttatgcatttatactgtagctgctgctagctgctcgtatttgtttgtataattggggatcgatggggccaatggccattgctttacggctcttacgtctagtttgtagtatctgaatttaatttgtggttgtgttcgttatgtgttttttcgtgtcaatattatataggctctctcatcatgcagtgatcaggctgtgttcggaaggtgaggctgagaacttatctcccgcgctcgtaaaacatagcgatatatttttttattagtgaagtatttatttttttagaaaaagattaatgtgaatttttaaaataacttttgtatagaaatttttttatagataacacaccgtttataaaccgtttgaaaagcgtgcacgtgaaaaacgaggtacgtgagttgggaaaattggagaagaactcagcctcagccctcgtgtatgtgtgtgatgtatgcaggtggtggtttgggtggcggcgccggcgatgatacgggcggggtcgacgacggcggtgatgacggtgatgctggtggcgttcatgttggagtacctgccaaagatctaccactccgtcgtcttcctccgccggatgcagaaccagtccggccacatcttcggcaccatctggtggggcatcgccctcaacctcatagcctacttcgtcgccgctcacgtcagtaataacttacactaactaatcagcactggatgccatcatcaagtgtcgtcaatggcgtttgtgtttttttttgttcttgcaataggcggtgggcgcgtgctggtacttgctgggggtccagagggccaccaagtgcctgaaggagcagtgcttgcttgccgggctgccggcgtgcgcgtcgtccacggcggcggtggcgtgcgtcgacccgctgtactacggcgccgccgtggcgtccgtcggcggcgaccggctcgcctggggcgggaacgcgacggccaggaacgtgtgcctcagcagcggcgacaactaccagtatggcgcgtacaagtggaccgtcatgctcgtctccaaccccagccgcctcgagaagatgctcctccccatcttctggggcctcatgaccctcaggtgaatcaaagatctaataactgtgttcttagttcttaaatgctcatctgatcttgttatttataagggaaagtgttttcatctttcgaggtcatatcctcttgcatatcacttaaatagttattattttttaaaacttttttataagatagattaatattaaatatatatcacttcacagaaatacaagtataaatttgacatatgtaaattgcaaaaaaaaaaactgcgaatgcacattaactattttcatttgaatttagctttatatgtttgtggagttataggctcccatcggttacccattttgcctaataagctaaaatggcttattaaaaaataaaaattaatttataagtaaaacttttgtagatttgtacgtagcgacttaaaagccaacattaacaaaaaaattacgttaaaagcatatcaaaatcaacttcaaaatcaagttcaaaaattcaaattttggcttattctttgactgtttaggccaaacgatggggctgatatattatgtatatatttcatacaaattcacattgtcaatttccttttaattttttcatgactattcaggtgacatgaaaaaaaaaccgaaggacgccctctcgagaaatgaaaatccatctcccattgataagtttttgcatgtttgttgcagcacgtttgggaatctggagagcacgacggagtgggtggagatcgtgttcaacataatgacgatcacggggggcctgatcctggtgacgatgctgatcgggaacatcaaggtgttcctgaacgcgacgacgtcgaagaagcaggcgatgcagacgcggctgcgcgggctggagtggtggatggagcacaagggggtgccgcacgggttccggcagcgggtgcggcagttcgagcggcagcggtgggcggcgacgcgcggggtggacgagtgccagatcgtccgcgacctccccgagggcctccgccgcgacatcaagtaccacctctgcctcgacctcgtccgccaggtccccctcttccaccacatggacgacctcgtcctcgagaacatctgcgaccgcgtcaagtccctcatcttccccaagggcgagatcgtgagtactctgctcacacacttaggccttttggaagccaagtcattgttggcgggaacggaaaaatgcgttacaacacgttatatgtatgtgatctaaatagttatataaaagttttatataatttgataagatagattatgataatataagacgctatacaaccacataaatttaggttcgatttatacataaaaagataaaaataataaattttatatacagtactattcactatctgattttattattttctctttctgtagttatagatcaaatttatgtcatctcattaatgttactattttcttttcaactttttaaataactattaaggttgcatacaaataatgggtgtcatgatagttaggtgtagaaaaaaccatgtccattgctagaagctgaggtgtggttggttggttttgtgcagattgtgagagaaggggacccggtgcagaggatgctgttcatagtgagggggcacctgcagtgcagccaggtgatgaggaacggggcgacgagctggtgcacgctggggccggggaacttcagcggggacgagctgctgtcgtggtgcatgaggcggccgttcatggagcggctgccggcgtcgtcgtcgacgctggtgacggcggagagcacggaggcgttcgggctggaggccggcgacgtcaagtacgtgacgcagcacttccggtacaccttcaccagcgacaaggtgcggcgcagcgcgcggtactactcccacgggtggcggacgtgggcggccgtcgccgtgcagctcgcgtggcggcggtacaagcaccgcaagacgctcgcctcgctctccttcatccgcccgcgcaggccgctctcgcggtgctcgtccctcggggaggagaagctcaggctctacaccgccatcctcacctcccccaagcccaaccaggacgacgacttctaa</dnaseqindica> |
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