Os05g0512600

From RiceWiki
Revision as of 20:13, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0512600

Description

X8 domain containing protein

Version

NM_001062558.1 GI:115464846 GeneID:4339297

Length

2146 bp

Definition

Oryza sativa Japonica Group Os05g0512600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25460683..25462828

Sequence Coding Region

25460800..25460851,25461223..25461496,25462256..25462616

Expression

GEO Profiles:Os05g0512600

Genome Context

<gbrowseImage1> name=NC_008398:25460683..25462828 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:25460683..25462828 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgattccgttgctgctgctgctcttgctggccatgtccacaggctcagatggggcgttctgcgtgtgcaagcccgaccagagcccggcggcgatgcagaaggccatcgactacgcgtgctggcgcggcgccgactgcacccagatcatgcagtccggcgcgtgctaccagccgagcaccatcgtcgcgcactgctcctacgccaccaactcctacttccagaagaacagccccatcggcgccacctgcgacttcggcggcgtcgccaccctcaccaacaccgaccccagctccggcacctgcaagtacccggccaccgctagcggcgtaggcaccggaatgggaaccggaaccagcaccggcactggcactggagttggcaccggcggcaccggcactggtggcgcaggcgtcggcgcaggcaccggcacaggcgttggcacaggaaccggcaccggcgcaggcatgggcaccggtgctggtgccggcaccgggatcacgaccccgggatcgaccaccggcactcagggaggcgccctgagcccaccgtttggcggcgcatatggcccgtcggccggcgccatgaaccccgactacaacgaggccgcgccggcgcgctcccagctggccgccgccacctccgtcctcctcgccgccgcaccattcctgttccatctcatctag</cdnaseq>

Protein Sequence

<aaseq>MAIPLLLLLLLAMSTGSDGAFCVCKPDQSPAAMQKAIDYACWRG ADCTQIMQSGACYQPSTIVAHCSYATNSYFQKNSPIGATCDFGGVATLTNTDPSSGTC KYPATASGVGTGMGTGTSTGTGTGVGTGGTGTGGAGVGAGTGTGVGTGTGTGAGMGTG AGAGTGITTPGSTTGTQGGALSPPFGGAYGPSAGAMNPDYNEAAPARSQLAAATSVLL AAAPFLFHLI</aaseq>

Gene Sequence

<dnaseqindica>118..169#541..814#1574..1934#agcactgcacttcacagttcacaccaccttccttccttcccgactccccacaccggccggtctccttctcgctgcagggagagagagctcgagctcttctctgctgctgctgctgccatggcgattccgttgctgctgctgctcttgctggccatgtccacaggctcaggtacgtgaggccccagcccaaaacctgcatcctctgcgagaaagggacaagcaaatcgaactcgtgtctgttcagttgttcttgagtttcttgcccatttttgttattaccaccgtgcacgtagttgctcgtaggaatctttgcctggagcaatggctcaatgtttatcttgcaatttcttgcgcatagcctctttcccccttttgttcgtgtgcacagtagaaacatcgaagaggagagattcactccgagcctctgctagctagtgctagatttgaatcagatttgagacatgcatgcattcagttctgaacttttgagctaccgatttgagctaacctgtgttcccgtttggcggcggcggcgagcagatggggcgttctgcgtgtgcaagcccgaccagagcccggcggcgatgcagaaggccatcgactacgcgtgctggcgcggcgccgactgcacccagatcatgcagtccggcgcgtgctaccagccgagcaccatcgtcgcgcactgctcctacgccaccaactcctacttccagaagaacagccccatcggcgccacctgcgacttcggcggcgtcgccaccctcaccaacaccgaccccagctccggcacctgcaagtacccggccaccgctaggtacattcccccaaaaaacctccccttctttcacatccttttttcttgtgttcttgttcagattaatggactatggttaatgtttgtggttagtgagttcttggacctggaaaagaaatgagagtatcttaggcaatctgcagttttggcctgatgctttgcatcaatctagattcttttatgtgagcacgcacggccgtactgactgcagttagatttgtttaatttaccgagaactcactgatctagaagagtatatactgtttctgcgtctaccaatacgtatattcagagccgtgtatcatgctgcgagttgcaaatttgcaagttggcagcgccgaacctggaataatatactagttgaaagttgaaacaatgttcggtactaccaaaaggttgcatctttccatgcaaaagtagtgttacttgtagttcatagctggtttgctgctttgcatatggttcttgtccatgtgaaattaaaaggcattcttaacggatcttctaatcggagcttaaagcaacgtcttttgtggatgaaagcggcttgccggggtctgccggccgccgcgctaccctatctcaaagtacattgcacctacacaccagctcatcagtatctgcatatacactccactcagactacctttcttcagtctaagcatgtccagaattttcagtgcacaatgtcttcaagaatttataaaggaggtttcttactttctttgctcactactacgtctgattttttgtgtgcagcggcgtaggcaccggaatgggaaccggaaccagcaccggcactggcactggagttggcaccggcggcaccggcactggtggcgcaggcgtcggcgcaggcaccggcacaggcgttggcacaggaaccggcaccggcgcaggcatgggcaccggtgctggtgccggcaccgggatcacgaccccgggatcgaccaccggcactcagggaggcgccctgagcccaccgtttggcggcgcatatggcccgtcggccggcgccatgaaccccgactacaacgaggccgcgccggcgcgctcccagctggccgccgccacctccgtcctcctcgccgccgcaccattcctgttccatctcatctagagccacacaagggggcagtggattccgtctcgtcggtggtgggggcgcacggcgccggccggagtttggtgggcattgcaatgcagcggcgttgccggcgttggtgctttgtctcgcccgcgctttccggcctgtgccgccacccctgctggttttgatcgatcatcagtgtattcagtagtggtactgggagtactccttcagtagtagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0512600, RefSeq:Os05g0512600