Os05g0582800

From RiceWiki
Revision as of 20:15, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0582800

Description

Peptidase S10, serine carboxypeptidase family protein

Version

NM_001062977.1 GI:115465684 GeneID:4339738

Length

1702 bp

Definition

Oryza sativa Japonica Group Os05g0582800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29135006..29136707

Sequence Coding Region

29135312..29136640

Expression

GEO Profiles:Os05g0582800

Genome Context

<gbrowseImage1> name=NC_008398:29135006..29136707 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29135006..29136707 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctccgccgcttctcctcgtctcgctcctgctcatcggcttcgtcagcgccagagccatcacaccctcagctgaagcggcggcggtgttcccgaaggaagccctgccgaccaactccggctacctccccatcacgacaaccaacgcctcgctcttcttcgcctactacgaggccacgcacccgctcacgccgccggcctccacgccgctcctcctctggctccagggcggccccggctgctccggcctcgccggcaatttcttcgagctcggcccctacttcgtcaaccgcgacgcgctctccctctcgcccaaccccttctcgtggaatcgccggtttggtctcctcttcatcgacaacccgctcggcacgggcttcagcgccgcgccgtcccccgccgccatccccaccaaccagtccgtcgtcgccgcgcacctcttcgccgcgctgcagtcgttcttcgcgctccagccgggctcccgctcccgccccttcttcctcaccggcgagagctacgccggcaagtatatcccggcggctgggtcgtacatcctggccgtgaaccccacgctgccgacgcggctgcgggttaacctccacggcgtggccatcggcaacgggctgacgcaccccgtcgcgcaggtggcgacgcacgcggacaccgcctacttcatgggcctgatcaacgccaagcagaagcgggagctggaggcgctgcaggcgagggcggtggagctgacgaacgcggcgaggtggagcgaggcggccgacgcgagggggctcgtgctgtcgtggctggagaacgcgacgggcctggcgacgctgttcgacgcggcgaagaagcgcccctacgagacgggccccgtggggaagttcgtgaaccgggcggaggtgaaggcggcgctgggcgcgcgcggcgacgtggagtgggaggagtgcagcgacgcggtgggcgcggcgatgcacggggacgtgatgaagagcgtgaagccggaggtggaggcgctgctgcggggaacgcgcgtgctgctgtaccagggcatccgcgacctcagggacggcgtggtatcgacggaggcgtggatgcgggagctggagtgggacggcctgcccgccttcctcgacgccgaccgcgccgtgtggcgcatcggcgaggagctcgccgggtacgtgcagcgctccggcccgctctcccacgtcgtcgtctacggcgccgggcacctcatgccggcggacaacggccgcgcggcgcaggagatgatcgaggattgggtgttgcaggcggggctattcgggcgccacggcgggatgaagcgcgcggcctga</cdnaseq>

Protein Sequence

<aaseq>MAPPLLLVSLLLIGFVSARAITPSAEAAAVFPKEALPTNSGYLP ITTTNASLFFAYYEATHPLTPPASTPLLLWLQGGPGCSGLAGNFFELGPYFVNRDALS LSPNPFSWNRRFGLLFIDNPLGTGFSAAPSPAAIPTNQSVVAAHLFAALQSFFALQPG SRSRPFFLTGESYAGKYIPAAGSYILAVNPTLPTRLRVNLHGVAIGNGLTHPVAQVAT HADTAYFMGLINAKQKRELEALQARAVELTNAARWSEAADARGLVLSWLENATGLATL FDAAKKRPYETGPVGKFVNRAEVKAALGARGDVEWEECSDAVGAAMHGDVMKSVKPEV EALLRGTRVLLYQGIRDLRDGVVSTEAWMRELEWDGLPAFLDADRAVWRIGEELAGYV QRSGPLSHVVVYGAGHLMPADNGRAAQEMIEDWVLQAGLFGRHGGMKRAA</aaseq>

Gene Sequence

<dnaseqindica>68..1396#tttcaacgccacaaaccacagactgacaagctcatcctgttcccatctcaactgcggtcactcaccaatggctccgccgcttctcctcgtctcgctcctgctcatcggcttcgtcagcgccagagccatcacaccctcagctgaagcggcggcggtgttcccgaaggaagccctgccgaccaactccggctacctccccatcacgacaaccaacgcctcgctcttcttcgcctactacgaggccacgcacccgctcacgccgccggcctccacgccgctcctcctctggctccagggcggccccggctgctccggcctcgccggcaatttcttcgagctcggcccctacttcgtcaaccgcgacgcgctctccctctcgcccaaccccttctcgtggaatcgccggtttggtctcctcttcatcgacaacccgctcggcacgggcttcagcgccgcgccgtcccccgccgccatccccaccaaccagtccgtcgtcgccgcgcacctcttcgccgcgctgcagtcgttcttcgcgctccagccgggctcccgctcccgccccttcttcctcaccggcgagagctacgccggcaagtatatcccggcggctgggtcgtacatcctggccgtgaaccccacgctgccgacgcggctgcgggttaacctccacggcgtggccatcggcaacgggctgacgcaccccgtcgcgcaggtggcgacgcacgcggacaccgcctacttcatgggcctgatcaacgccaagcagaagcgggagctggaggcgctgcaggcgagggcggtggagctgacgaacgcggcgaggtggagcgaggcggccgacgcgagggggctcgtgctgtcgtggctggagaacgcgacgggcctggcgacgctgttcgacgcggcgaagaagcgcccctacgagacgggccccgtggggaagttcgtgaaccgggcggaggtgaaggcggcgctgggcgcgcgcggcgacgtggagtgggaggagtgcagcgacgcggtgggcgcggcgatgcacggggacgtgatgaagagcgtgaagccggaggtggaggcgctgctgcggggaacgcgcgtgctgctgtaccagggcatccgcgacctcagggacggcgtggtatcgacggaggcgtggatgcgggagctggagtgggacggcctgcccgccttcctcgacgccgaccgcgccgtgtggcgcatcggcgaggagctcgccgggtacgtgcagcgctccggcccgctctcccacgtcgtcgtctacggcgccgggcacctcatgccggcggacaacggccgcgcggcgcaggagatgatcgaggattgggtgttgcaggcggggctattcgggcgccacggcgggatgaagcgcgcggcctgactccgcactccgggcgccggcggaggccaacctgtggcctcatctcttgcggtgtcaaactctaatctgattttagaatcgagcagagtacatcgaggaatacaagcatttgagtctataattttttcttctggtgtggttgaattcatcgtgataaactatcctgatttcattgggattatctcctctagaaggcagcttattcaggtttgttttttgttcagtccaagatcagagggcaataccgaaggatcactttgtaccaaactaccaatgcagtatattcaataacaaggacttagaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0582800, RefSeq:Os05g0582800