Os06g0126500

From RiceWiki
Revision as of 20:16, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0126500

Description

Ubiquitin domain containing protein

Version

NM_001063194.1 GI:115466119 GeneID:4339971

Length

2078 bp

Definition

Oryza sativa Japonica Group Os06g0126500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1413222..1415299

Sequence Coding Region

1413497..1413794,1413883..1414139,1414241..1414387,1414487..1414804

Expression

GEO Profiles:Os06g0126500

Genome Context

<gbrowseImage1> name=NC_008399:1413222..1415299 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1413222..1415299 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgggagcgagccctaaggccaagaaaggcgcgacggtgaagttcgggtcgatgaagaatcctcctcctcccccggtggttggcgccgccgccggagcagcggcggcggcggcgggtgggaaggtgccggcggaggaggtgtgggaggtgcggccaggcgggatgctggtgcagaagaggggcggcggcgccgacgaggagcccgtcaacgtgaagccggtgcccaccatccgcgtcaaggtcaagcacgccggcatcacccacgagatctacatcaactcgcaggcgtccttcggggagctgaagaagatggtggcggcgcgaacggggctgcatccggacgaccagaaggtgatgtacaaggacaaggagagggactccaaggcgttcctggacatggccggcgtcaaggacaggtccaagctggtggtcgtcgaggaccccgaggcacgcgcccgccgcctcatcgaggagcgccgcaatggccacctcgagaaggccgccaaggccgtcgccgccgtcaccgccgaggtcgacaagctcgcccccaaggtggcggcgctggacgcgtcggtgaggaagggggagaaggtggcggagaacgacgtggtgcaggtgaccgagctgctcatgaacgagctgctcaagctcgacgcggtggtcgccgacggcgacgtcaaggcgcagaggcggctacaggtgaagcgcgtgcagaagtacgtggagacgctcgacgccgtcatggccaagaacgccgccatcgtgcgcaagtccggcgagaagctcacctccaaacaacaccatcacccgccggcgaggcagcagcagcagcaagctcaccaacaccatcagcagccggcggcggggcagacgcggtgggagatgttcgacctgctgtcctcgctgccgtcgacgtcgtcggcctcctcaacgaccaccgtcagctcaacggcctcctccggcgcgccgccgccgctgccgccgccggcgaaccggctcgactggatgctattctga</cdnaseq>

Protein Sequence

<aaseq>MLGASPKAKKGATVKFGSMKNPPPPPVVGAAAGAAAAAAGGKVP AEEVWEVRPGGMLVQKRGGGADEEPVNVKPVPTIRVKVKHAGITHEIYINSQASFGEL KKMVAARTGLHPDDQKVMYKDKERDSKAFLDMAGVKDRSKLVVVEDPEARARRLIEER RNGHLEKAAKAVAAVTAEVDKLAPKVAALDASVRKGEKVAENDVVQVTELLMNELLKL DAVVADGDVKAQRRLQVKRVQKYVETLDAVMAKNAAIVRKSGEKLTSKQHHHPPARQQ QQQAHQHHQQPAAGQTRWEMFDLLSSLPSTSSASSTTTVSSTASSGAPPPLPPPANRL DWMLF</aaseq>

Gene Sequence

<dnaseqindica>276..573#662..918#1020..1166#1266..1583#gttccctcatcaacctcaccaccattattttcttctctcctcttctcttcttcctcctctcctctcctctcctcgctctccatccatctcgtcttcttcttcctcctcctcagcttcgagatttcagcttctccaaacccccattcttcccgccacaagctctgctctgtgctttgctcgctcgcctttcccgccattggtgtgcttcgctttcttggcttcaaagatccgacgagctctgtgatagctggggagaagaagaggaggagaggaggatgctgggagcgagccctaaggccaagaaaggcgcgacggtgaagttcgggtcgatgaagaatcctcctcctcccccggtggttggcgccgccgccggagcagcggcggcggcggcgggtgggaaggtgccggcggaggaggtgtgggaggtgcggccaggcgggatgctggtgcagaagaggggcggcggcgccgacgaggagcccgtcaacgtgaagccggtgcccaccatccgcgtcaaggtcaagcacgccggcatcacccacgagatctacatcaactcgcaggcgtccttcggtcagtgcccgccgccgccgtcgtcgtcgtcgtcgacggcgaactcgatggatgggggccatgtctgatttcgttgtgggtggtgcaggggagctgaagaagatggtggcggcgcgaacggggctgcatccggacgaccagaaggtgatgtacaaggacaaggagagggactccaaggcgttcctggacatggccggcgtcaaggacaggtccaagctggtggtcgtcgaggaccccgaggcacgcgcccgccgcctcatcgaggagcgccgcaatggccacctcgagaaggccgccaaggccgtcgccgccgtcaccgccgaggtcgacaagctcgcccccaaggtaggcacccacccacattgcccgccatccatggcgacgccgacgccgaggtagtaggctcacctccgattggttggttggttggttggttggttcggcaggtggcggcgctggacgcgtcggtgaggaagggggagaaggtggcggagaacgacgtggtgcaggtgaccgagctgctcatgaacgagctgctcaagctcgacgcggtggtcgccgacggcgacgtcaaggcgcagaggcggctacaggtgagctgacgagctacctcgccgcctcctccaatctccaccgactagcttgaccgccatggttaatgagctcaacctgttcgtcccatgactctgcaggtgaagcgcgtgcagaagtacgtggagacgctcgacgccgtcatggccaagaacgccgccatcgtgcgcaagtccggcgagaagctcacctccaaacaacaccatcacccgccggcgaggcagcagcagcagcaagctcaccaacaccatcagcagccggcggcggggcagacgcggtgggagatgttcgacctgctgtcctcgctgccgtcgacgtcgtcggcctcctcaacgaccaccgtcagctcaacggcctcctccggcgcgccgccgccgctgccgccgccggcgaaccggctcgactggatgctattctgagcacacacatcacagaatcggcagatgcaatggtggtgcttggttggcaagaattgcacccatgtccggaaaatccgaggtgtcctgtccctgatgagatgatgatgaagatgatgattgaattgccctggattatttgctgctgctctagcaatttggttggccacattacatggtactactaccacttctagatgagttcagttcatcatgtgagagtaatttttttttaattttgttttttctttctttctttctttcttcttcttcttcaccatcaaatgtttgatattcttttgtgtgcatatattctgagaaagagagagagagagagagagagagaggaaattaggggggaagagagaaattgaagtgtattcagattgggaataagtcaaaaagggttattattgttctccaattggcgtttgaagaaaaggcaaagaaaatgttgtacccatatggatacagataccaatacataccgttcttgat</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0126500, RefSeq:Os06g0126500