Os06g0136000

From RiceWiki
Revision as of 20:17, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0136000

Description

Similar to Hypersensitive-induced reaction protein 4

Version

NM_001063258.1 GI:115466247 GeneID:4340038

Length

3331 bp

Definition

Oryza sativa Japonica Group Os06g0136000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1908701..1912031

Sequence Coding Region

1908931..1909292,1909837..1909933,1910704..1910795,1910882..1911002,1911681..1911875

Expression

GEO Profiles:Os06g0136000

Genome Context

<gbrowseImage1> name=NC_008399:1908701..1912031 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1908701..1912031 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgagcgccttcttcctgctgtgcgggtgcgtggaccaggcgagcgtcgcggtggtggagaagtggggccgcttcctccgcctcgccgagccgggcctccacttcttcaacccgttcgccggcgagttcgtcgccgggacgctctccacccgcgtccagtcgctcgacgtccgcgtcgagaccaagaccaaggataatgtctttgttcagcttatctgcacaatccaatatcgggttgttaaggaacatgctgatgatgcattctatgagttgcagaatccccaacagcaaattcaggcctacgtctttgatgtggtccgagctatagttccgagaatgaatcttgatgatctttttgagcaaaagaatgatgtggcgaaagctgtacttcaggagctagaaaaggtgatgggagattatggttacagcattgagcacattctcatggttgacatcatccctgatgctgctgtacgcagagcaatgaatgaaataaatgcagcacaaaggcttcagcttgcaagtgtctacaaaggagaggcggagaagattcttctggtgaagaaagcagaagcagaggcagaggcaaaacacctttccggtgtcggcattgctagacagcggcaggcgataactgatggcctgagagagaacatcctgaacttctcgcactcggtttcaggcacctcagcaaaagaagtcatggatctcatcatggtcacgcagtacttcgacaccatcaaagaacttggggatggctcgaagaacaccacggtgttcatacctcatggcccaggccatgtcagggatatcagcgagcaaatccggaatggtatgatggaagcgtcctgcagcaacgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MVSAFFLLCGCVDQASVAVVEKWGRFLRLAEPGLHFFNPFAGEF VAGTLSTRVQSLDVRVETKTKDNVFVQLICTIQYRVVKEHADDAFYELQNPQQQIQAY VFDVVRAIVPRMNLDDLFEQKNDVAKAVLQELEKVMGDYGYSIEHILMVDIIPDAAVR RAMNEINAAQRLQLASVYKGEAEKILLVKKAEAEAEAKHLSGVGIARQRQAITDGLRE NILNFSHSVSGTSAKEVMDLIMVTQYFDTIKELGDGSKNTTVFIPHGPGHVRDISEQI RNGMMEASCSNV</aaseq>

Gene Sequence

<dnaseqindica>2740..3101#2099..2195#1237..1328#1030..1150#157..351#atcatcgtgttcgtttcctcgtcaaaagggcaaaaagaacacgaagaagaggggcgtccaaatccgccgccgaattccccacccgtcgcgtccaaaatccaaatccgccgccgcgatcgaggccgacgaggagaggttgaggttgaggtgagagccatggtgagcgccttcttcctgctgtgcgggtgcgtggaccaggcgagcgtcgcggtggtggagaagtggggccgcttcctccgcctcgccgagccgggcctccacttcttcaacccgttcgccggcgagttcgtcgccgggacgctctccacccgcgtccagtcgctcgacgtccgcgtcgagaccaagaccaaggtttcccttctcggtcacgctacctcgcgagtttcttctgtttgttttggatttctagtgtagcccccatggccattatccaatgttaaggttcaatactaggcagaccatggaattattcgtaattctccacctgagcccactgattggggatttggttcaaagtatgtattcgatcagttctctcggtgcgccagattagtatctaattgttgaaccagacagggtccattttgtcctaattactgatgggagtaacagagctggtatgcttgtgatgggtgtgcgtgatggtggaaaaaaagtaattagtcaatgctaattgggcatatttcattgtgtctgctgggtgatgcttaacgatgtcatgctaagtgaaccaagggaattactgttactctgtaaatttagttggttcatgagatgaagttgtcgagcaacattatttgaggatcagtgatatgcagatttttcctttttccttttattgggagatgctttgccaggacagcaatggaaacgcaattaataacatgttatatccttgtgatgctcttgctatatagcgcttacaaatgaaatgaaatatttgctatggaatgacaattttacttaatgctagcacttggttgtttctttgcttgatgaaacattggatgatgtgcttttcccctgcaggataatgtctttgttcagcttatctgcacaatccaatatcgggttgttaaggaacatgctgatgatgcattctatgagttgcagaatccccaacagcaaattcaggcctacgtctttgatggtaaaattattaatattgaacaattcagctgttgctcatagcaaattactgactcaaaaatctaaccactttttccttgaaatcagtggtccgagctatagttccgagaatgaatcttgatgatctttttgagcaaaagaatgatgtggcgaaagctgtacttcaggagctagaaaaggtaaccgtatgccaattaacttgatcttttagttgtgaaaattccagtatacatctaatcaatattttaggtttctacatgtattgcttgcttctattgtttcatggtaaacacttcatgtgtttaaacaattctgccaggattctaactgccgtcacccatctgttttgtggttgttgcagtattctttttgttatttttcccctttgattccttttgcatgtttcgagagttgggaattttctttggttcattctaaacatgccgtttggtttctgtcagttcatttttttttaaaaaaagtattggttttaagttttaacatacttatttattgggacaagggatagttccaggatactacttggtggaacgttgttgtttgtacaacttgcatcacaaagaactttgatattgtgttgtatgctgcaatgagttctgctcaggaaactaaagtgtttactaacttttggacacccgtgtttctttcttccacaggtgattggtaataaatatgataaaaataaaattgtttctggttatccaatgctatcattgtttatccaagtttcattgctaaagtctagttttgtcatgaaaattctgttgcctcttattgtcagtgataagcaatttcttgtatactatatagtttctcttccccccaaaagaatcacaatgtccatggtctgttcatctttttcttcgatggtcttctcgtactgtagtttctgtcgtcttgcaatttgataaatcctagatgcttccaggtgatgggagattatggttacagcattgagcacattctcatggttgacatcatccctgatgctgctgtacgcagagcaatgaatgaaataaatgcaggtatggtgccctatatgtcgtacttctttcatagtgtacagtccggaggaccttttctcggtttattggatgccgcaatgttttctcgaagtcaaaacctatcacagttcttatagttatctaatgcttttatgttatcttttctactcatgcttcattttctgtttcttgtaatgttggaagaaagttgaatgacgatgacttgagttaaaacagtgaaagcagggaataggttggggaagaaacatatgtaaaatatatgatcagggaaagaccattgcaatattgaaaggaataggattagtttattcatgcttgcttaattcaacctacgaatgagtctaccctctattttaggtcttgcaacctatctatctcaatctgaacttaaattatgccaactgtcttgtactgactctgtcctggttcattgctcatagttacatattgtacaaaccacaccacaattatagcaacgtctgatgttaagacaatttctgttttgtgcatgtgtgctcactcaactattaaattcttataacagcacaaaggcttcagcttgcaagtgtctacaaaggagaggcggagaagattcttctggtgaagaaagcagaagcagaggcagaggcaaaacacctttccggtgtcggcattgctagacagcggcaggcgataactgatggcctgagagagaacatcctgaacttctcgcactcggtttcaggcacctcagcaaaagaagtcatggatctcatcatggtcacgcagtacttcgacaccatcaaagaacttggggatggctcgaagaacaccacggtgttcatacctcatggcccaggccatgtcagggatatcagcgagcaaatccggaatggtatgatggaagcgtcctgcagcaacgtgtaaatcggtatcgaatgcggaaccaaggttgggggtggttcagatgggaggtcctgtttatagtgaatagtacgaatgaatgctagtagcatgtgttgtttgcacgcgcgccctggagttgtatgcagtggtagatagagttcgagttttggcataataatattgtctgaattttatgtaaaagaaaatcacatgtcttccttttgtgagttaaaagttgcaccgatttatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0136000, RefSeq:Os06g0136000