Os06g0172000
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os06g0172000 |
|---|---|
| Description |
Basic helix-loop-helix dimerisation region bHLH domain containing protein |
| Version |
NM_001063474.1 GI:115466679 GeneID:4340271 |
| Length |
2437 bp |
| Definition |
Oryza sativa Japonica Group Os06g0172000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:3639787..3642223 |
| Sequence Coding Region |
3639876..3640310,3640395..3640801,3641033..3641726 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:3639787..3642223 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:3639787..3642223 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccgccgcgccggtggcctccccattcccggcgcttccctcctcctcctcctccaccaccatcgcggcctccaccgccgcgcgccggtgccacgacgcgctgctcccaccgccagccgccgcggggcgcgagccggctcgcaccaggggatcctcctcctccttggctggcgccgcgggggagaggaggaggcggcgaggcgaggaggatggcggcgaggtcgaggccgaggcggagcggcggcgaaaggaggaagtgaaccgtaagatcgcgtcccggaaggcgctctccgtcatcctccgccgcgaggccaccaaggccgtcctcgacaagcgcaagcccggcaagggcacccgccgcctcctcccccgcaccgtcctcgaggccctccacgagcgcatcaccgccctccgctgggactccgccctcaaggtgttcgatctaatgcgcgaccaggtgtggtacaggccgtacgtcgggatatacgtcaagctgatcaccatgctgggcaagtgcaagcagccggagagggcgcacgagctgttccaggccatggtggacgaaggctgcgctcccaacctcgagtcctacacggccctcgtctccgcgtacagcaggagtggccgcttcgacagggccttctccttgctcgagcagatgaaggccacccctggttgccgacctgatgtgcagacctactccattctcatcaagtcatgcttgcacgcctatgattttgagcgggtcaagtatttgatggaagatatggcgcgggcgggtatccgtcccaatgtcgtgacttataacacattaattgatgcctatgggaaagcaggaaggtttgctgagatggaatcaactcttctggagatgctgactgaaaattgcaagcctgatgtatggacaatgaattctactctcagagctttcggtggcagtggtcaaattgaaactatggaaagctgttatgagaagttccaggcctccggtatctccccaaacattaagacttacaatattttacttgattcctatggtaaagctaaaatgtatgagaagatgggagctgtgatggaatacatgcagaagtattactattcttggacaatagtcacatacaatgtagttattgatgcatttggaagggctggggaccttgaacagatggaatatatttttagattgatgaaatctgagcgtataaagcccaactgtgttacactctgctcgttggttcgagcatatggaagggctggggatgttaagaaaataaagacagtgttgagaatcgttgagaattctgacataacgttggatattgtgttcttcaactgtttggtggacgcgtttgggagggtggggtgcttggcggagatgtgggatgttcttgatataatgaaattacaacgatgcaaaccagacaaggtaacctgcactaccatgattaaatggtttctcatcaaaggaattgatgatcatcgtgttcagtacctacgggacttaaaagacgggcgatctaaagataacatatag</cdnaseq> |
| Protein Sequence |
<aaseq>MAAAPVASPFPALPSSSSSTTIAASTAARRCHDALLPPPAAAGR EPARTRGSSSSLAGAAGERRRRRGEEDGGEVEAEAERRRKEEVNRKIASRKALSVILR REATKAVLDKRKPGKGTRRLLPRTVLEALHERITALRWDSALKVFDLMRDQVWYRPYV GIYVKLITMLGKCKQPERAHELFQAMVDEGCAPNLESYTALVSAYSRSGRFDRAFSLL EQMKATPGCRPDVQTYSILIKSCLHAYDFERVKYLMEDMARAGIRPNVVTYNTLIDAY GKAGRFAEMESTLLEMLTENCKPDVWTMNSTLRAFGGSGQIETMESCYEKFQASGISP NIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEY IFRLMKSERIKPNCVTLCSLVRAYGRAGDVKKIKTVLRIVENSDITLDIVFFNCLVDA FGRVGCLAEMWDVLDIMKLQRCKPDKVTCTTMIKWFLIKGIDDHRVQYLRDLKDGRSK DNI</aaseq> |
| Gene Sequence |
<dnaseqindica>90..524#609..1015#1247..1940#gcgcggacgaaaaatcgcgccgctctccggcgcaaaactgcagcgaggcgagctcgccctcgcctccggctactccgagccgcgccgcaatggccgccgcgccggtggcctccccattcccggcgcttccctcctcctcctcctccaccaccatcgcggcctccaccgccgcgcgccggtgccacgacgcgctgctcccaccgccagccgccgcggggcgcgagccggctcgcaccaggggatcctcctcctccttggctggcgccgcgggggagaggaggaggcggcgaggcgaggaggatggcggcgaggtcgaggccgaggcggagcggcggcgaaaggaggaagtgaaccgtaagatcgcgtcccggaaggcgctctccgtcatcctccgccgcgaggccaccaaggccgtcctcgacaagcgcaagcccggcaagggcacccgccgcctcctcccccgcaccgtcctcgaggccctccacgagcgcatcaccgccctccgctgggactccgccctcaaggtcctcaccctcaccactgcctccatcccatcatagcctatacccgtgtctcccgctaacctcgccgtgtccattgccgaccaggtgttcgatctaatgcgcgaccaggtgtggtacaggccgtacgtcgggatatacgtcaagctgatcaccatgctgggcaagtgcaagcagccggagagggcgcacgagctgttccaggccatggtggacgaaggctgcgctcccaacctcgagtcctacacggccctcgtctccgcgtacagcaggagtggccgcttcgacagggccttctccttgctcgagcagatgaaggccacccctggttgccgacctgatgtgcagacctactccattctcatcaagtcatgcttgcacgcctatgattttgagcgggtcaagtatttgatggaagatatggcgcgggcgggtatccgtcccaatgtcgtgacttataacacattaattgatgcctatgggaaagcaggaaggtaattgatagtaaaattcatgctttaaaatatgaacatgcctttctcatatttgatacaaataactattgaaaatgcgattaactttatgcggagaacttcagagaatcttaatttcaagaacagccagaatttgaatattaccgtaattgaaatgcatttctgattctttccaaatctgtagttactcctgatgcgatttcattgaactaatgatgctttatgattaaggtttgctgagatggaatcaactcttctggagatgctgactgaaaattgcaagcctgatgtatggacaatgaattctactctcagagctttcggtggcagtggtcaaattgaaactatggaaagctgttatgagaagttccaggcctccggtatctccccaaacattaagacttacaatattttacttgattcctatggtaaagctaaaatgtatgagaagatgggagctgtgatggaatacatgcagaagtattactattcttggacaatagtcacatacaatgtagttattgatgcatttggaagggctggggaccttgaacagatggaatatatttttagattgatgaaatctgagcgtataaagcccaactgtgttacactctgctcgttggttcgagcatatggaagggctggggatgttaagaaaataaagacagtgttgagaatcgttgagaattctgacataacgttggatattgtgttcttcaactgtttggtggacgcgtttgggagggtggggtgcttggcggagatgtgggatgttcttgatataatgaaattacaacgatgcaaaccagacaaggtaacctgcactaccatgattaaatggtttctcatcaaaggaattgatgatcatcgtgttcagtacctacgggacttaaaagacgggcgatctaaagataacatataggcactaacactaagcagacaatgtcagaacttcagtttgcaagatggaacaacctgtcagaacactaagcagacaatggtgatatttgttctccgtaattttccaagaaagatggaacaacctgtaagaactccagttagcagagacacatcaatcttagcctgctctttgtaggtagcttcattgttacttattcaacatgtaatgtacacaacacaacaatgaaagtttgttttacgatcttaacaatggagctatttgactgcatctggcaaaactgcctatggttatggcatcccataaatgaattatgtcttgaggatctgagcaagattttgctatccgagcaaacggatcaggacaatgaaataaagaagaaggccttgacgaacagtgaatcttaagtgtcggtgaccaatcagttagattgtgctgtgctgttgtgacttgatgtatggatcatacagctgtacatgatattcagtattgactcgtgc</dnaseqindica> |
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