Os06g0221200

From RiceWiki
Revision as of 20:20, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0221200

Description

Similar to Annexin p33

Version

NM_001063711.1 GI:115467153 GeneID:4340522

Length

2990 bp

Definition

Oryza sativa Japonica Group Os06g0221200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6249719..6252708

Sequence Coding Region

6249813..6249888,6250013..6250158,6250270..6250494,6251094..6251306,6252191..6252484

Expression

GEO Profiles:Os06g0221200

Genome Context

<gbrowseImage1> name=NC_008399:6249719..6252708 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:6249719..6252708 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacgctcaccgtcccctccgccgtcccgcccgtcgccgacgactgcgaccagctccgcaaggccttccaagggtggggcacgaacgaggcgctcatcatctccatcctggcccaccgcgacgcggcgcagcggcgcgccatccgccgcgcctacgccgacacctacggcgaggagctcctccgcagcatcaccgacgagatctccggcgacttcgagagggccgtgatcctgtggacgctggacccggcggagcgcgacgcggtgctcgccaacgaggtcgcgaggaagtggtacccagggagcgggagccgcgtgctggtcgagatcgcgtgcgcgcgcggccccgcgcagctgttcgcggtcaggcaggcctaccacgagcgcttcaagcgctcgctcgaggaggacgtcgcggcgcacgccactggtgacttccgcaagctcttggtgccacttataagtgcttaccgctatgaggggccggaagtcaacacaaagttggcacattcagaagccaaaattctgcatgagaagatccagcataaggcatatggtgatgatgagatcatcagaattctcactactaggagcaaggctcagttgattgcgacattcaatcgttacaatgatgaatatggtcacccaatcaacaaggatctcaaggctgatcccaaggacgagttcctttccacgctgcgtgcaatcatccgctgcttctgttgccctgacaggtacttcgagaaagtcatcaggttggccatcgcaggcatgggaacagacgagaactccctcactaggatcattaccactcgtgccgaggtggatctgaagctgatcacggaggcgtaccagaagaggaacagtgtcccgctggagcgtgcggtcgcaggggacacctccggggactacgagaggatgcttcttgctcttctgggtcaggagcagtga</cdnaseq>

Protein Sequence

<aaseq>MATLTVPSAVPPVADDCDQLRKAFQGWGTNEALIISILAHRDAA QRRAIRRAYADTYGEELLRSITDEISGDFERAVILWTLDPAERDAVLANEVARKWYPG SGSRVLVEIACARGPAQLFAVRQAYHERFKRSLEEDVAAHATGDFRKLLVPLISAYRY EGPEVNTKLAHSEAKILHEKIQHKAYGDDEIIRILTTRSKAQLIATFNRYNDEYGHPI NKDLKADPKDEFLSTLRAIIRCFCCPDRYFEKVIRLAIAGMGTDENSLTRIITTRAEV DLKLITEAYQKRNSVPLERAVAGDTSGDYERMLLALLGQEQ</aaseq>

Gene Sequence

<dnaseqindica>95..170#295..440#552..776#1376..1588#2473..2766#cgggtctcctctcctcccccgccgacgcgcactcgatcccccccgcctccgcctccgcctccgcctccgcgtcgcccatctcgagatcccccgcatggcgacgctcaccgtcccctccgccgtcccgcccgtcgccgacgactgcgaccagctccgcaaggccttccaaggttcgtttcgctcgctcgctctctcgtccgcccccgcatttctctccgcgccgcgctgcctgtgtgcgtgtgtgacgcgatcgtgtgagtgatctggtttggttgttgggttctcccggtgaagggtggggcacgaacgaggcgctcatcatctccatcctggcccaccgcgacgcggcgcagcggcgcgccatccgccgcgcctacgccgacacctacggcgaggagctcctccgcagcatcaccgacgagatctccggcgacttcgaggtaatcaatcccccgcctgagcttctcgggtccgtatccgtccgttcgttcgttcccagatctctgagatcgcggggggcgccgcttgctctgcttttgtgatgtgatcagagggccgtgatcctgtggacgctggacccggcggagcgcgacgcggtgctcgccaacgaggtcgcgaggaagtggtacccagggagcgggagccgcgtgctggtcgagatcgcgtgcgcgcgcggccccgcgcagctgttcgcggtcaggcaggcctaccacgagcgcttcaagcgctcgctcgaggaggacgtcgcggcgcacgccactggtgacttccgcaaggtgatccgttcatccacttgttttccatctgtctcggatcatcgctcggtctgatgatctgctaaactggtgcatcgttggaatagtattgtcgactggtgataaaacactgaactgagaatttggccttcatcttgtgcaatgcctttttactcctataaacagagaaagaaaatccgactaggttgttgttgttcgttctcgaatatacattgataaagttataagttgttggatcctattgcacatacaaaattcctttttacctaaatcatatgaaattgatctctagtgttgcaatcatgtatccctatggaacactcagatgaaatataaatgtgatttatgcaatgtcttttgtgtatcccgaaaatatgtgatttcagttatagtttcttcccccagaacatttctaaatttggaggtggtacttcaaaacaagctttgtatgcatgaacttcagatatgctttacttcagagatgaatgtcatggttgttttcgccattatttttctgaatgagtgttggagaagggtagtgtagaagtgcagaatattggtgattctttttgcgatctaacattatttattcatatcagctcttggtgccacttataagtgcttaccgctatgaggggccggaagtcaacacaaagttggcacattcagaagccaaaattctgcatgagaagatccagcataaggcatatggtgatgatgagatcatcagaattctcactactaggagcaaggctcagttgattgcgacattcaatcgttacaatgatgaatatggtcacccaatcaacaaggtgcgtactaatcttatgacctgtgctgctattcttttgtatttcaaagcatgttaagtagtagcctacttatgctctgttatatctatcatgctgacttgcgttctgcatagcattgttctatagagttaatttctattgtctgataagatacattgtagtatgttgtttctcggttcacatgatgttaacattacctatttaccttcaaatttgaagggaatcaactgattaagcagccctccaagtatctgtcctctaaatccatatgtatttccttttgtgcgttcgcgaaaaaatccatatgtattcataaggcctgatacatcaattggatgaatgtatccattcagttaatatgaacctatagcctgttgtcactcgttttgtttcattttctgttaaggcccactaaatccttctgtaatgttgtacttctgtgctgattgttgaccctgagttgttttttttaatatcctttggtacaaatattaggcattactcattactcaaatgaagtttttaaaatctcttaacgaagttggccggcactctttgtcagtccagcgatatagttgaagtttatttttaacagtgttaatttttggcactttcttcgcaattgttggaatgtttagacccgtcataaacctatgttactggtctaaccttttactctttaataccatgggtatgatttgaacaacttgaagaagtgcttgctgtgatacgatttgcttccattttgttcttaaagcttaatgttctacaagttctgcagaggtggttattcttatcacaggcagtgtaaccattttatttcccccggattttgtgtccatcgaaggcttgcattctaacatgctgctctactccatttacaggatctcaaggctgatcccaaggacgagttcctttccacgctgcgtgcaatcatccgctgcttctgttgccctgacaggtacttcgagaaagtcatcaggttggccatcgcaggcatgggaacagacgagaactccctcactaggatcattaccactcgtgccgaggtggatctgaagctgatcacggaggcgtaccagaagaggaacagtgtcccgctggagcgtgcggtcgcaggggacacctccggggactacgagaggatgcttcttgctcttctgggtcaggagcagtgagccatgcctatcttgcccagtcacacacttcatgtgatcatgtcatatcagagaataaacctgttatgcaggggacacagccgtggtgattatgatgttgtttttccagtgtacggtactgtttgctgcagcttgcataacagtgacgatgaaataaatcatagtggaatgcgttggctcatgggacctcacttattttgcaactttttgacaggtcttatttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0221200, RefSeq:Os06g0221200