Os06g0225900

From RiceWiki
Revision as of 20:20, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0225900

Description

AAA ATPase domain containing protein

Version

NM_001063735.1 GI:115467201 GeneID:4340548

Length

4002 bp

Definition

Oryza sativa Japonica Group Os06g0225900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6502744..6506745

Sequence Coding Region

6503105..6503218,6503309..6503380,6503528..6503584,6503696..6503834,6503921..6504105
,6504227..6504310,6504736..6504858,6506227..6506268

Expression

GEO Profiles:Os06g0225900

Genome Context

<gbrowseImage1> name=NC_008399:6502744..6506745 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:6502744..6506745 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggagaccagagcttttttctcatgggaacttgttaaggccttgcaaaggtatattgctttttggacctccagggacagggaaaacacttttggcaaaggcacttgcaacagaagctggagcaaattttatcagcataactggttctaatcttacatcaaagtggtttggagacgctgagaagctcactaaggcccttttctcctttgctagtcggctagcacctgttatcatatttgtggacgaggttgatagcttacttggtgcaagaggtggtgcatttgaacacgaagcaacaagaagaatgcggaatgaattcatggcagcttgggatggtttaagatccaaagagaaccaaaggatccttattcttggtgcaacaaaccgtccatttgatctagatgatgcagtaattcggcgtttacctaggcggatatacgttgaccttccggactcacagaatcgaatgaaaattctgaagattttacttgcaaaagaaaacctggaatctgatttcagatttgacgaactagccaatgcaactgagggttactctggtagtgacttgaagaacctatgcatcgcagctgcgtacagaccagttcatgagcttctagaagaagaaaagggaggcgttagtggcacaaaaatatctttgaggcccttaaagttggaggattttgtgcaagcaaaagcaaaggtaagtccatccgtcgcttttgacgccacgagcatgaacgagttacgaaaatggaacgagcagtacggggaaggtggaagcaggagtaaatcaccatttgggttcggcagctaa</cdnaseq>

Protein Sequence

<aaseq>MRRPELFSHGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANF ISITGSNLTSKWFGDAEKLTKALFSFASRLAPVIIFVDEVDSLLGARGGAFEHEATRR MRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDSQNRMKIL KILLAKENLESDFRFDELANATEGYSGSDLKNLCIAAAYRPVHELLEEEKGGVSGTKI SLRPLKLEDFVQAKAKVSPSVAFDATSMNELRKWNEQYGEGGSRSKSPFGFGS</aaseq>

Gene Sequence

<dnaseqindica>3528..3641#3366..3437#3162..3218#2912..3050#2641..2825#2436..2519#1888..2010#478..519#cattggatgggctagaagtcactatttatcatcagtgacgtgtccctctataaagggtgacaggctgatcattccccgtgagaggtatttcatcattgattttgggattcggtcatctctgttggctctgcactgacaatgctttcttgttttttttgaagtctggacctagcaattggaaggttaaaggcacaggaggcttcatcgaggaagtcttctgaaaaaattaaggtaatttagctttagttgtttaacttttctattagttgctagtcttatttgtcctgctggcaagtcattgtactgcgttacttccaagctcaagggggatcttcactgcagattttggcaaaagatgaattcgagcgcaatttcatttcagcagttgtacctcccaatgaaattggagtaaaatttgatgatattggtgctcttgaggatgttaagaagacactggatgaacttgttactcttccaatgaggagaccagagcttttttctcatgggaacttgttaagggtatgccttcctgtttttgttatcgtgtctacctgcacctttttttgatcttgtatatagtgtttttgcttcattgttaccacttgggtgtataaaataccttggagtatgttaccaatccatagcttaaaatcatggaatgttatgttctaatgtacaaaaaatttagtgctatccctttctatataaagaagcttgtaacttgttggggcctttggtgttctgactcgtgactctacaagtttgtttgcagctatgtcactattgcttgatgttgttttataatcagcgattatctgatgccaattttaatggggacgtcttttctgtattatctgctttacctgttacaagttatgtcttgaacatatgatataatgggtcatagtgagtctacagtactattacatgtttgcactagacgcaaaaacaacaaaatgttaattggatggaaaataaatccttaaatcaggtctctaaatagttttgtccctttatagcataaactttgttcctgatttcctctaggtgagttggttaggtggctctagtagcactccttaggtactgggttcgactccccgtgggagtgaatttcagcttggggttaaaaaaattcccctcgtctgtcctacaccgaagcacaggtctaaggcctggccaggtcattggtcgttctcacatgggctatggtgctgctgtgtaaggttggggcaggggttcgggggttttcttgacctgcatgagaaggtcttcttagcaaaataccccggggttgtcttaacccccccccccacccccaccaggtcgagtttgaacctacttgctatggctgttgcacgtcaaggcgcaagtgttgctatcacagatgaaaatgcgaaaatcattagagatgttaatgagattattgttttatgccatactgcttgattccactgtatttgccaagttggcaaacctgaagttcaaggtctcatgaccatctttcttagttcaactgtgccctgtgtgtcaaaaattgtatgataggcattcatttcaaaattcaaacttcgcaaatttttaccaggctaactatatataggtttaatcatacagaagtggtattagtagatttgtacattgtacatgatattcttagtaacaacatattccaagaaaaacttatggtcaaactgctaaataaatggctgcaacaagtcgatccatgccttgcaaaaattggagtatgaaacaaaatctggatatttagctttgctttgttgggtgtacttccttattgttatgttctgttaattgttttgcatatgcataaaattttcattgttgtaattttaacatgacatgtttgtatggacctttgtttagccttgcaaaggtatattgctttttggacctccagggacagggaaaacacttttggcaaaggcacttgcaacagaagctggagcaaattttatcagcataactggttctaatcttacatcaaaggttctgtctgactcttttgattctttttaactgtttggacttggagtcatgtactcatgttaaatcttttatttatttcaccataggtagatttctatgcccttctgtatttagttttctccccttcatcaaagtttttaagtgaatgaaagacatgataatgccaaacattcttttataaatggtgactggacaaattactgactatatgaactgtgctggtgctgcagtctgcactgaatcaaaatctctactagctcccacaccaatttcagtacagcttttatttaacgtttttccccatcttttgcgagtgtgtgcctgccacttgaaagaaattaggaggcaacacagaacttagcagtccatcccttgcataaaacttttctcatggagcccttgtccatatatttctctgtttacagtggtttggagacgctgagaagctcactaaggcccttttctcctttgctagtcggctagcacctgttatcatatttgtggacgaggtaaattttgcttccgttaatgaaactggcatagtcatttatattcaggagattatcttgtggtttccaatttcatacgaaatctctttattctaatgcaatttgtatttgataatgacaggttgatagcttacttggtgcaagaggtggtgcatttgaacacgaagcaacaagaagaatgcggaatgaattcatggcagcttgggatggtttaagatccaaagagaaccaaaggatccttattcttggtgcaacaaaccgtccatttgatctagatgatgcagtaattcggcgtttacctaggcggtaagatctgcaatcgtgtgattttaccaaaattatctaagcttggtcagtatatcaaaatgacggtctgtcaatgtgatatgtaggatatacgttgaccttccggactcacagaatcgaatgaaaattctgaagattttacttgcaaaagaaaacctggaatctgatttcagatttgacgaactagccaatgcaactgagggttactctggtagtgacttgaaggtattgctaagccctccatagcggttcaactcttaacctcctgctttccaagaaaacatctactagccatgtttgttttgtgtatggagactaacgtggcactttctgcagaacctatgcatcgcagctgcgtacagaccagttcatgagcttctagaagaagaaaaggtgatttgtccttgcttgtaaatatttatacttcaagctaggtgatttgtccatgcttgtaaatatttgtacttccgttcttaagctttgttcatcatcttggatgtggtgtccccacgtttgttcatacgatctccatttttttagggaggcgttagtggcacaaaaatatctttgaggcccttaaagttggaggattttgtgcaagcaaaagcaaaggtataacctaaccactggctactgcatctccaatgtttcactgtgctgtgcttttgtgatacttatctggttcttttgccccctatacaggtaagtccatccgtcgcttttgacgccacgagcatgaacgagttacgaaaatggaacgagcagtacggggaaggtggaagcaggagtaaatcaccatttgggttcggcagctaacattgttctgtcagtatttttagttctcacattgtatcatctgcatcattagcgagctccaactttagccataggaagccagcaataggcgcttctttctctgatgtgcccgcctcctttccttttcacctatatcctatttcagagttatgtgatccctgtatcaatagagaaacacctaatcacaccaaattttcctgagcctttttgaacaagtgctccgtcctcctgttgtaattttgatgcatccctctgttgaaacctgaccaaactgtaaatagccgaagaagaaattttgtcccgagacaacagataatatgctgttacaacaaaataaatcccatattctttccattttgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0225900, RefSeq:Os06g0225900