Os06g0302000

From RiceWiki
Revision as of 20:21, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0302000

Description

BURP domain containing protein

Version

NM_001187809.1 GI:297724748 GeneID:9268400

Length

4213 bp

Definition

Oryza sativa Japonica Group Os06g0302000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:11382277..11386489

Sequence Coding Region

11383951..11384005,11384105..11384206,11385454..11386283

Expression

GEO Profiles:Os06g0302000

Genome Context

<gbrowseImage1> name=NC_008399:11382277..11386489 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:11382277..11386489 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaaggatacatggaagacagggaacacgaaaagtccctacaagcggagaaagaggaactcaaagaagtttcagtgtcatatggccatgaagtaaaactaagcaatttgttccctacgagattcggacataagaattatcaacacacattcgaaggaatggatcatggacgccatgttcacgcacacggcaacaagatgcagcaactggccgacgtcttcttcttccgcgacgccctccggccgggctccgtcatcacgccgaccatcccgccgacgacctcgctgccggccttcctccctcgccacgtcgccgacgccatcccgttctccgccgaccgctttgccgacgtcctcgccatgttcgcgccggcgtccctcgccatggcgcgcgagatacggtgggcgctcgacacctgcggccagcgggcggcggcgctgctcccgggcgagaaggccggctgcgccacctccctcgagtcgctcgccgacctcgccgcgtcgctcctcgggacgcgcgacgtccgcgcgttctccgccgccgaccttcccaccgacgccgcgaccacgccggcgcggcgcgggaggtacaacgtgacgtccgtgcgggagctctcggcgatggctggttccggttcgtcgtcgtcgtcggagccggcgccggctgccgtcgtggcgtgccacgacctgacgtacccgtacgccgtgttctactgccacagtaccaagccgaccgccgcgtacgcggtgacgctggtggcggcgaccaccggggacggcgacggcgaaggcgaggcggcctcgccggcgaagatggaggcgctcgccgtgtgccacctggacacgtcgcggtggagggcggacaacccgttcttcgtggcgcacggcgtcaagccgggggaggtgtccgtgtgccacttcctcaccaagctcagcatcgtctgggtcccacgccacgagcaggggggcccacgcgcagcagcttaa</cdnaseq>

Protein Sequence

<aaseq>MKGYMEDREHEKSLQAEKEELKEVSVSYGHEVKLSNLFPTRFGH KNYQHTFEGMDHGRHVHAHGNKMQQLADVFFFRDALRPGSVITPTIPPTTSLPAFLPR HVADAIPFSADRFADVLAMFAPASLAMAREIRWALDTCGQRAAALLPGEKAGCATSLE SLADLAASLLGTRDVRAFSAADLPTDAATTPARRGRYNVTSVRELSAMAGSGSSSSSE PAPAAVVACHDLTYPYAVFYCHSTKPTAAYAVTLVAATTGDGDGEGEAASPAKMEALA VCHLDTSRWRADNPFFVAHGVKPGEVSVCHFLTKLSIVWVPRHEQGGPRAAA</aaseq>

Gene Sequence

<dnaseqindica>1675..1729#1829..1930#3178..4007#atgaatatgaaaagtctgtacacatagacaaaggtgagaatatttggaagaacatttggcgtattgtattttcgtaaaagttgttgacatatatagataatataaaaatattttctgtattgcccgtaaattgtagaggacctcaaagaagtctcagtgtcatatggctcaaatgtgaaactaagcaatttgttcccaacagggtatgcacatcagaaatatatattaacaagcggaggtaacattagaactagtggatgctcatgttacgtatattgtgtgtatatgttatatacatgtatatttgaaattataaaatgggccatatgagttgcagctggactaaaggaagtctccgtgacatatggaagtgatggtgaagaggagccaaggaaaacattctctaaagtagggtatatgttagataaggaatgcaagaagtcttcagatgtagacgaaggtacaatattttggagtgcattatgtattttgtatttttctctaggttgttgacatattcggaaaaactaaataaattgtttctacatggaccatgaactgtagaggaactcagagaagtctcagtctcatatggcccaaaattgaaactaaacaattagttccccacagaacataagaaatatatatacacaaacgaagataagattatttcgaactaaaggatgttagtgtaatgtattgtatgtctcatataaatgtatattgtaaataaaataaattggccatatgggctgtagggggactaaaggaagtctcggtgtcatatggaagtaatggtgaagaggagaccagcaaaaccactcctatgggaggatacatggtagatatgaaaaacgaaaagtctctgcaagcagagaaaggtgagaacaggatgtgtgcacaattcatgaattaatatattgttgacataatatagaaaactaaatgaattgtttctacatggactgccaactgtagaggaactcaaagaagtttcagtgtcatacggttcagatgtaaaactaggcaatttgttccccatagaacacaagaaatatgtatacagaaatgaaagtgagattattttgaaactaaaggagatgttagtgcaatgtattgtatgtcttatataaatgtctattgaaaataaaaataaatgagccatacgagctgcagatggactaaaggaagtctcggtgtcatatggaagtaatggtgaagaggatacaagcaaaacctttgctatgggaggatacatggttgataacgaacgtgaaatgtctctacaaggacagaaaggtgagaatagaaagtatactcacaattcatgaattgtagttttgtatacattgttgacataatatagaaaaccaaataacctgtttctacatgcatgagctaccaactttagaggaactcaatgacatttcattgtcacatggtccagatgtaaaactaaacattttgttttccacataacacaagaaatatatatatgcaaacaaatgtgagattatctgggactaaaagatgttagtgtaatgtattctatgtaagacatagatgtctactgaaaataaaaataaatgggccatacaagttgcattgggactaaaagaagtctcggtgtcatatggaagtaatgatgaagaggagacaagaaaaatcattcctatgaaaggatacatggaagacagggaacacgaaaagtccctacaagcggagaaaggtgagaataggaagtatgcataaaattgaattgataagtatattgttgatataatacagaaaactaaataaattgtctctacatcggcgtcaactatagaggaactcaaagaagtttcagtgtcatatggccatgaagtaaaactaagcaatttgttccctacgagattcggacataagaattatcaacacacattcgaaggtgagaatatttggaaatagcaagtttgtctgttatactttcatataacttatgaatgcgtctagaaaagcaattagggtattcatactgtaagttgttttcctttgaaccttttgtgtttcccttaaaattgtctaagcacgtacattttgatagagcgatgctattacatatctcggttaccaagagacactaaattttatgttaaaaatatatttgtcacctctcaccatcatccaggactgtaaaatttctcaccatcatccaggactgtaaaatttctcattttgatgactttcttaatcttgtatagcctatcgatatatgcatcggcatatatatatatatatatatatatatagttcactatgcttgtaactcaaagatacaaagtggataattgtaataataataaaataaacatggttcaccaatctagaaatttcaaccattggcggatcttaatatatactctttccttgtcaaaatatatatctatctttgtatttcaaatttttacctcttaaccacttaagaaatgcatttccttaagatcttattcggtttagaggggattaaagaggattggaggggattgaggaggaataattccacaccacaatatgtgtggaataaatctcccccaatccgtccctcacagggattaaccaatcaaggcctaagggagctaccaaaatttatctcacaagttatactttcaattctttttcaaactctctgagacatatacatacatgtgtgaaacattaattttctttttttttctttcttttctatatggtatataaggatagaatgattattttattcataccgctgttcgctgcatgcgaggatgacttggcatgctcacgtagcaccttttgtgggtccaaggactatattaacccaaatgattaatttgaaagacttatttgaacgatttgaaacctcaaggactaaactgagctcgaagcgaaactatagggatcatattcaccctaaaataaacatggttcaccggtctagaaatttcaagcattggcagatcttaatacatactctttccatgttaaaatgtagctatctttgaatttcaaatttttacctcttaaccacttaagaaatgcatttccttaacggaactaccaaaatttatctcacaagttgtactgccagttctttctcaaactctttgaggcgatatacatacctctagctattctacgttgttggttcattcgcaggaatggatcatggacgccatgttcacgcacacggcaacaagatgcagcaactggccgacgtcttcttcttccgcgacgccctccggccgggctccgtcatcacgccgaccatcccgccgacgacctcgctgccggccttcctccctcgccacgtcgccgacgccatcccgttctccgccgaccgctttgccgacgtcctcgccatgttcgcgccggcgtccctcgccatggcgcgcgagatacggtgggcgctcgacacctgcggccagcgggcggcggcgctgctcccgggcgagaaggccggctgcgccacctccctcgagtcgctcgccgacctcgccgcgtcgctcctcgggacgcgcgacgtccgcgcgttctccgccgccgaccttcccaccgacgccgcgaccacgccggcgcggcgcgggaggtacaacgtgacgtccgtgcgggagctctcggcgatggctggttccggttcgtcgtcgtcgtcggagccggcgccggctgccgtcgtggcgtgccacgacctgacgtacccgtacgccgtgttctactgccacagtaccaagccgaccgccgcgtacgcggtgacgctggtggcggcgaccaccggggacggcgacggcgaaggcgaggcggcctcgccggcgaagatggaggcgctcgccgtgtgccacctggacacgtcgcggtggagggcggacaacccgttcttcgtggcgcacggcgtcaagccgggggaggtgtccgtgtgccacttcctcaccaagctcagcatcgtctgggtcccacgccacgagcaggggggcccacgcgcagcagcttaatcatcatcgatgatgtaaacaagctctacaacctaaagtgaacaatttggcgtggtttgtgcgtaatttgcagcaacggtcgatcgagctatctacttatatagtatgtaaaaagtgaataattcagtttgtcatcgtgtgaaccacatgtgtgctgcatatttgtgcgtgtgcatgttcataattaatatggatattgtgtcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0302000, RefSeq:Os06g0302000