Os06g0520600
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os06g0520600 |
|---|---|
| Description |
Similar to Zinc finger CCCH type domain containing protein ZFN-like 1 |
| Version |
NM_001064277.1 GI:115468285 GeneID:4341164 |
| Length |
5619 bp |
| Definition |
Oryza sativa Japonica Group Os06g0520600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:19978561..19984179 |
| Sequence Coding Region |
19978724..19979101,19979696..19979791,19979990..19980199,19980851..19980916,19981202..19981303 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:19978561..19984179 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:19978561..19984179 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgcctcaggacgatgactggttctgggggcgcccgactcccgtcgtcgtcggcgacggcgagacgacgtcgaagccaaagccgccggtggcgggaaagacgaagaaggtggaggagcagcacccacggcgaccgggggagccggactgcagctactacgtcaagttcgggagctgcaagttcggcatcagctgcgtgtacaaccacccggatccgaggccgcagcatggcgccgacgacaagaagccggccgagcagttcccgcggcggcccggcgagcccgactgcagctactacgtcaagttcgggagctgcaagtttgggatgaattgcaggttcaaccaccctccccgcatgccagtgccaccacaacaagagtatttctctgggaatgcatgccactgccaccatattgaaggcaaaagtaaagttgagcaagtaaagctgaacgttcttgggcttccacttcgtcctgggacagggttgtgctcatactacatgaaccggggaatctgcaaatttggcactaactgcaagtttgaccacccagatccaggctcagatcatgagaagtgggtcgtttcaagtaatgccaatcaagtttcctctcaggtgaacatttactcggtgcttgaccatggagaatcgaatgagcatacttttacctccgaagaagtccatcagccagggattccaagttttcaccaacgaatcagttacacaagggaccaacttctccaactttgtcagaatgtcgaagtgcccaaggacatcttaaaattttgtcaagatattaatgttgaactgaatggtgaagataaaatttcgggatttggagcagagaaagatcatgtacaaactccatcatataaacggtttgacgcgacagacagccgtgactggcattcatggtctgcacaaactaattgggaacagaaattttgggacaacttctctgaagcaaaagaaccctattctttaggttggaagcaagagaaatttaacaagcctgaccaatcaagcttccactttgattctaaagatcagtggttaaaatttataaagtgtacaccctgcaaaagcactttaattaaggctgaagtccctttgtcaatccagagaggcattatctctggcaaagatgaagttctgaaaacattgaaaagtatactaaacacattttcaccaaagatgttcgatcttcagaagggccagctaatagaaacaagaatctctagcgctgatattttgaaggatgttattaatcttatatttgaaaaggttgttgctgagccagccttctgttcgacgtatgcgcaactttgcacatatctaaatcaaaacctcacaccattccctcctgaagactgtgattgtgaagaaattacgttcaaacaagcactgtcgaacaaatgtcaagaaatattcgaaagtgctcacaccgtatgttctgagattggcaaattgattggacaagaccgagagatggagcaacgggataaagaaagggtagtgaaacttgaaacactgggaaatattaatttcattcgagccctgctcaagaaaaagttgatcacaaataagataatagatcacattgttcaggcagtgatggattgttgtaagtttcgctttgaaccacttggaaaagttgatttgctaaatataatatttgaaggcatgctggattcagattcagcaggtgatgaatctaatatttgcgtcaatgctatgattggtggcaataaatcttccatagcttcaaatgatgtcgagatgactcgtaagaatgtcaataggcaaaatgaagaggcaatattacaaaaatcttatgatgaagtcccaaataacaaaatggatcctcagaaaaattatgcagatggagcaatcagttatctcattgagaaagagaagccaactaacttagaatcatctgtgaggatctgtcgaggaggatgcagtatttcagagataatggagttagttgttgatgcaggagctgtggaaggcagtgatgagcatttcatggctaccttattatttattaaacctgaatatagggaaatatttcttacccttgatacacgtgaaggaagacttgggtggctgaaaaggatgtacaaggtgaaggaataa</cdnaseq> |
| Protein Sequence |
<aaseq>MPQDDDWFWGRPTPVVVGDGETTSKPKPPVAGKTKKVEEQHPRR PGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVKF GSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKVEQVKLNVLGLPLRPGT GLCSYYMNRGICKFGTNCKFDHPDPGSDHEKWVVSSNANQVSSQVNIYSVLDHGESNE HTFTSEEVHQPGIPSFHQRISYTRDQLLQLCQNVEVPKDILKFCQDINVELNGEDKIS GFGAEKDHVQTPSYKRFDATDSRDWHSWSAQTNWEQKFWDNFSEAKEPYSLGWKQEKF NKPDQSSFHFDSKDQWLKFIKCTPCKSTLIKAEVPLSIQRGIISGKDEVLKTLKSILN TFSPKMFDLQKGQLIETRISSADILKDVINLIFEKVVAEPAFCSTYAQLCTYLNQNLT PFPPEDCDCEEITFKQALSNKCQEIFESAHTVCSEIGKLIGQDREMEQRDKERVVKLE TLGNINFIRALLKKKLITNKIIDHIVQAVMDCCKFRFEPLGKVDLLNIIFEGMLDSDS AGDESNICVNAMIGGNKSSIASNDVEMTRKNVNRQNEEAILQKSYDEVPNNKMDPQKN YADGAISYLIEKEKPTNLESSVRICRGGCSISEIMELVVDAGAVEGSDEHFMATLLFI KPEYREIFLTLDTREGRLGWLKRMYKVKE</aaseq> |
| Gene Sequence |
<dnaseqindica>164..541#1136..1231#1430..1639#2291..2356#2642..2743#2879..3073#3159..3277#3410..3497#3594..3944#4856..5386#tgggactagctgcatttccttctcttctaatgaccccgttcatggttgattagtttgagattatcatcaattctctgtttgtcggtggagcacctgcagcacctccgacgaatccgccgctgcttcgccgtcgcgtgtgctggagcggctcgccgccagctccatgcctcaggacgatgactggttctgggggcgcccgactcccgtcgtcgtcggcgacggcgagacgacgtcgaagccaaagccgccggtggcgggaaagacgaagaaggtggaggagcagcacccacggcgaccgggggagccggactgcagctactacgtcaagttcgggagctgcaagttcggcatcagctgcgtgtacaaccacccggatccgaggccgcagcatggcgccgacgacaagaagccggccgagcagttcccgcggcggcccggcgagcccgactgcagctactacgtcaagttcgggagctgcaagtttgggatgaattgcaggttcaaccaccctccccgcatgccagtgccaccacaacaagaggtaataatgtcaaacacatgcgtattatattggtaaaaacctttggaagaaaaatacttgtttctttccgtcgtacaaaattattctgaagcaaaatcaagattacttctctcctaaaaaaatcaagattattttctggcgtcagtgagcagccaagaccctagtatttttttctcagcaacaaacaaacgtagttacagtgaacgttttcccccctaataactatgtggaatatgctatagctagctaggtagactcttgttttatttcgttatctctagaagtcgaccaggcagttagctttggactagttgggcttgggccatgacgagcaatggactagtaaagcttatggtccaggaagagaggagaagaaaaaactagaaaggggaagaagagaagatatgagagtggtttgaacttgaatcacaaatagtgaccccaaaagaattttttgtataaaatcctaattttcaagattttacacataacccattcattaattaattacttccgcaaatcaatttatgcatgcatcacattaatacattgtttgttaggagtattctttatctcacagaaagtgttttttagtatttctctgggaatgcatgccactgccaccatattgaaggcaaaagtaaagttgagcaagtaaagctgaacgttcttgggcttccacttcgtcctgtaagtctttctaattcttttcttgttgggtttatttcttctgcacgcaattatgttagctaggccaatcatttgtaacaaagctttctttttgccttttccattgatcacaatatattagggcattgcatactactgtttaattcaaaaattactattttgttggtgaaaacatgatacatgcatgtaatccttcaggggacagggttgtgctcatactacatgaaccggggaatctgcaaatttggcactaactgcaagtttgaccacccagatccaggctcagatcatgagaagtgggtcgtttcaagtaatgccaatcaagtttcctctcaggtgaacatttactcggtgcttgaccatggagaatcgaatgagcatacttttacctccgaagaagtccatcaggtattatccagttgaaatattgatggctgtctttgtagaaaaatatagtcacacttatagtaccacttagtttcattatatctaacattgaacatattagttccattatatctaacattgaacatattttggtagtttctttgttgtgtgttaaaaatattactttttcttacctataaattaggtaaaaattaaataagtttgacctaaaaaaatgtcaaaatgacttataatatggatctaaggtaatactcgctaattgttcggatttgatgccaatattttccaattctacacatttgatataacactaacatactaaaacattgctgttgccaatacttgcctgtgttgatttgatagggcaccacaccaaaattgccatattttttcagcttgttgtcaatccatgcaaattgagcagtcttgaagtttgatatgagaattgtcttggattaattgagaaatgttgagtggtaaacattagtcaatgcctagcaaacatttgaagtgtgtaacaagcgtaaacatgaatcggattgtgtataaggtagacaataatgataatgtgtgcggcaagagatattttcccttaaacaaatattgttatagtatctttgctatgcttacttttgcattaatctgctgcagccagggattccaagttttcaccaacgaatcagttacacaagggaccaacttctccaactttgtcaggtataagttctgggcgactaatatgtttcactcattttctctcttaaaatttaattgctgtattgtgcaaattatcgtaagtaagacggataacattcttcaagccattacaaagtatcataattagttgttgtgaaaattccatcatattttttttatatttatcaatagatgactgttatcccctatgtattgctgtttttcgctgcagaaatgttcaagttctttacgcaaacttgtatggccttctcacatattattaatgtatgaattatgtctatgcagaatgtcgaagtgcccaaggacatcttaaaattttgtcaagatattaatgttgaactgaatggtgaagataaaatttcgggatttggagcagagaaagatcatgtgagcatccttcccttctcatatgtcatcatggcagaaatcgtttgtgctgctctgattaatgttcctcaaagatgcaaagtcttgtatttcatagtaagtacaatgttgcgtttttttgggtatatctgttaggtacaaactccatcatataaacggtttgacgcgacagacagccgtgactggcattcatggtctgcacaaactaattgggaacagaaattttgggacaacttctctgaagcaaaagaaccctattctttaggttggaagcaagagaaatttaacaagcctgaccaatcaagcttccactttgattctaaagatcaggtatcttaaaaatacaagtgtgttagtaaattgttatcagatctgaattgtacaatatggtcttctcaccttgtctctcaattagtggttaaaatttataaagtgtacaccctgcaaaagcactttaattaaggctgaagtccctttgtcaatccagagaggcattatctctggcaaagatgaagttctgaaaacattgaaaaggtattatttcatttaggaattctgttcttgtttcattagtaaagcattttcccatcaattgcatattcaaaaagtgtattttgtttatctgtttttgtttgcatatttttatttgttgtttttgttaaacagtatactaaacacattttcaccaaagatgttcgatcttcagaagggccagctaatagaaacaagaatctctagcgctgatattttgaaggtttggtttaataaaaagcaaagttatttttattcaggcagccttcttctatgttttggactgatgttgagttgtttctactatgcttttactcaggatgttattaatcttatatttgaaaaggttgttgctgagccagccttctgttcgacgtatgcgcaactttgcacatatctaaatcaaaacctcacaccattccctcctgaagactgtgattgtgaagaaattacgttcaaacaagcactgtcgaacaaatgtcaagaaatattcgaaagtgctcacaccgtatgttctgagattggcaaattgattggacaagaccgagagatggagcaacgggataaagaaagggtagtgaaacttgaaacactgggaaatattaatttcattcgagccctgctcaagaaaaagttgatcacaaataagataatagatcacattgttcaggtattcatatgccgccctccattgctagaacgttgcctgttaatgatccttttttaggtactgaaagttttattgaactcagccaaacaatttgaggacactccgggcctctgcaccactacactgcacacagcgaacacaccctccaacgcaaagaaaaacagaacaaacccaaatatctgttaatgatctggcaatttatgcagttaattaatactattcttagctgcttttaagatgatatggtgaccatgaagtacataatctttcagaaaaatattttaatcctatttatatatcctttagagctatttacctaaaaaatgtccacaggccacagatatataatccatttgtaacgtccagctatcaaaattaagcatattaattaaagatgttatgaaaagatttgccatatattatttcaatatggttgatcagatttcgtggtacttggtgccttttaagttataaaccagcaacatcgaatacatgaaaaccatgatttgtgcagagttttaccttgacaagcactatcataatctcataaagttttcctcgcaaaaaaaataatctcataaagttatttgattccatcaacttgttgtaatatatatgtctttcttacatgtcaaatagttagtttttaagtactacagttatcttttttatcaaacttatgtatgatatcttcttggaattatatatgtatatatattttttcaacttcagtatttatgaaataatgttttttgaaattcaatgtcatgtttgtgtttggtgaattgatttaatatattgcactccgatcagctattagatgggactaggaatagcattttttttcatttacacagcttgaagtatatatatatttactcaaccatgttatcctttcaattgttttgcaggcagtgatggattgttgtaagtttcgctttgaaccacttggaaaagttgatttgctaaatataatatttgaaggcatgctggattcagattcagcaggtgatgaatctaatatttgcgtcaatgctatgattggtggcaataaatcttccatagcttcaaatgatgtcgagatgactcgtaagaatgtcaataggcaaaatgaagaggcaatattacaaaaatcttatgatgaagtcccaaataacaaaatggatcctcagaaaaattatgcagatggagcaatcagttatctcattgagaaagagaagccaactaacttagaatcatctgtgaggatctgtcgaggaggatgcagtatttcagagataatggagttagttgttgatgcaggagctgtggaaggcagtgatgagcatttcatggctaccttattatttattaaacctgaatatagggaaatatttcttacccttgatacacgtgaaggaagacttgggtggctgaaaaggatgtacaaggtgaaggaataagtgttggaccttagttcatggattcttgcctattttctactcttatggtgtgcctactcatgaactatttacatgtgatttattgtgtaatgctacctaaatttattaacatcctacatttccatttgagtttgctttaagtgagatgaattcctatgtaattggtagtatgtacagtgtggcctatcgagttgtttcgctagagaatgcaattattaaatggtgttgcttgt</dnaseqindica> 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