Os06g0611400
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os06g0611400 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001064595.1 GI:115468921 GeneID:4341514 |
| Length |
2342 bp |
| Definition |
Oryza sativa Japonica Group Os06g0611400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:25256830..25259171 |
| Sequence Coding Region |
25256860..25257003,25257114..25257449,25257886..25258428,25258770..25259006 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:25256830..25259171 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:25256830..25259171 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgacacctctgttacaaattaccatgtcttctctgatcatcactagctggtggtggctacaggctacttgtactgctcgccaattagtcttcgatgtcagagacttcggcgctgtcgccgacggacagacagataattccaaggcgtttgagagggcgtgggcgaaggcgtgcgcggcgccggggagggcggcggtcgtcgtgcccgccgccggcggcggcggcggtggcggcggtggctacctgctccacccggtggtgttccggggaccctgcaaggggttcgtcgaggtgcgggtcgccggcgtcgtccgcgcgccggccggcctcgacgcgttccgggggtatcacgagtggatcaacttcgccggcatcgacggcctgctcgtcaccggcggcggcacgttcgacggccgcggcgcgtcgtcgtggcacctcaatgactgtccctggaaaccggactgcgtgcctcctccctcatccatcaagctggggagcgtgaggaacgcgaccatcacgggtgtgacgtcactggacagcaagttcttccacgtcaccatcgtcgggagccacgacgtggaggtgagccacgtcagcatccgggccccgcgcgacagccccaacacggacggcgtccacatccagggctccacgggcgtccggatcaccgacacggcggtcgccaccggcgacgactgcgtctccgtcggccccggcagcgccgacgtgacggtgtccggcgtgtcgtgcggccccgggcacggcatcagcgtggggagcctcggccggagccccggcgaggccgacgtgcggcggctgcgcgtgtccaactgcaccatcgccggcacggccaacggcgtgcggatcaagacgtggcgcggcggccagcggagctccgccgccgccgcggccgccgccgccgtttccggcctcgtcttcgaggacatcgtcatgaggagagtccgcaaccccatcatcatcgaccaggagtactgcccctatctctcctgccaccatcaatcggagcggcggccgtcggtggtgaggatcagcgacgtgaagttcaggaacatcaggggggtgtcggcgacgcaggtggcggtgaagctgtcgtgcagcgcggcgagcccgtgccgaggggtggagctcagggacatcgacctcagatacgtcaggcgaggggtggccaccgtgtcgcggtgcgccaacgtcgccggaggcgtcgccggcgggacgcttgtgccgcccccttgcatatga</cdnaseq> |
| Protein Sequence |
<aaseq>MTPLLQITMSSLIITSWWWLQATCTARQLVFDVRDFGAVADGQT DNSKAFERAWAKACAAPGRAAVVVPAAGGGGGGGGGYLLHPVVFRGPCKGFVEVRVAG VVRAPAGLDAFRGYHEWINFAGIDGLLVTGGGTFDGRGASSWHLNDCPWKPDCVPPPS SIKLGSVRNATITGVTSLDSKFFHVTIVGSHDVEVSHVSIRAPRDSPNTDGVHIQGST GVRITDTAVATGDDCVSVGPGSADVTVSGVSCGPGHGISVGSLGRSPGEADVRRLRVS NCTIAGTANGVRIKTWRGGQRSSAAAAAAAAVSGLVFEDIVMRRVRNPIIIDQEYCPY LSCHHQSERRPSVVRISDVKFRNIRGVSATQVAVKLSCSAASPCRGVELRDIDLRYVR RGVATVSRCANVAGGVAGGTLVPPPCI</aaseq> |
| Gene Sequence |
<dnaseqindica>31..174#285..620#1057..1599#1941..2177#tttgcttctcagttttgacacacaaacagtatgacacctctgttacaaattaccatgtcttctctgatcatcactagctggtggtggctacaggctacttgtactgctcgccaattagtcttcgatgtcagagacttcggcgctgtcgccgacggacagacagataattccaaggtaattaatcgctgcaacttggttactaatttgctcaaattgttcaaatcaaatctgaattgtcaacattttgaaagatttcattaattttgtgttttttttttgtgtaggcgtttgagagggcgtgggcgaaggcgtgcgcggcgccggggagggcggcggtcgtcgtgcccgccgccggcggcggcggcggtggcggcggtggctacctgctccacccggtggtgttccggggaccctgcaaggggttcgtcgaggtgcgggtcgccggcgtcgtccgcgcgccggccggcctcgacgcgttccgggggtatcacgagtggatcaacttcgccggcatcgacggcctgctcgtcaccggcggcggcacgttcgacggccgcggcgcgtcgtcgtggcacctcaatgactgtccctggaaaccggactgcgtgcctcctccctcagtaagttttgaagttacgcggtgccgggtgtcgaaaattcaatctgaacaatgcaataagaacctcgtgtttcaaacaggttttgacggatcatataagtacacaatgaaattatcatgtacgtgtaaatttttttcttttcaaattatattaaaatggattatttgctttatgcttcaaaaaatatatttttttaaaataaaactttcttctattgtattacttacaacacttgttttattatttatgaaaaaaattaatttatctttatggtgtagataatccataacaacgatccgctgaataaatcagacaagacgcgcgcactcactcacacaccacatatatggttttatttatttttctttcgagtattgtgagcgtttggcttaaaatatttttttttatgactcaaatttactatgtgtgtgcttagtccatcaagctggggagcgtgaggaacgcgaccatcacgggtgtgacgtcactggacagcaagttcttccacgtcaccatcgtcgggagccacgacgtggaggtgagccacgtcagcatccgggccccgcgcgacagccccaacacggacggcgtccacatccagggctccacgggcgtccggatcaccgacacggcggtcgccaccggcgacgactgcgtctccgtcggccccggcagcgccgacgtgacggtgtccggcgtgtcgtgcggccccgggcacggcatcagcgtggggagcctcggccggagccccggcgaggccgacgtgcggcggctgcgcgtgtccaactgcaccatcgccggcacggccaacggcgtgcggatcaagacgtggcgcggcggccagcggagctccgccgccgccgcggccgccgccgccgtttccggcctcgtcttcgaggacatcgtcatgaggagagtccgcaaccccatcatcatcgaccaggagtactgcccctatctctcctgccaccatcaatcggtcagagcacacacacaaagatctttttaaatactccctccgtttcatgttataaacgttttgactttggttaaaatcaaactattttaattttgacttagtttgtaggaaaaaaatagtaaaattttcgacccaaaaaaatttagtatggaaatatatttaattattgatttaatgaaactaatttaatattataaatattactatacttatctataaatttagttaaatttgaaacaatttgacttcgactaaagtcaaaataacctgaaatggagggagtaaatcttaagtttttgtctatggctgggctcaccggaggaattcattgacatgcacaggagcggcggccgtcggtggtgaggatcagcgacgtgaagttcaggaacatcaggggggtgtcggcgacgcaggtggcggtgaagctgtcgtgcagcgcggcgagcccgtgccgaggggtggagctcagggacatcgacctcagatacgtcaggcgaggggtggccaccgtgtcgcggtgcgccaacgtcgccggaggcgtcgccggcgggacgcttgtgccgcccccttgcatatgaaaatctgttttctgtttttttttcttttttcactttcttgttttctttctatatagcgtacagtcacagagagttggcgtggacgaaattttggttcttgtaaacgaccgatgacgagattgatccttaattatggggacatcttgttctcccctgtaatggaac</dnaseqindica> |
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