Os10g0124300

From RiceWiki
Revision as of 21:04, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0124300

Description

Similar to RGH1A

Version

NM_001070607.1 GI:115480957 GeneID:4348009

Length

4617 bp

Definition

Oryza sativa Japonica Group Os10g0124300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:1520796..1525412

Sequence Coding Region

1520796..1521095,1521190..1521486,1521840..1522614,1524574..1525412

Expression

GEO Profiles:Os10g0124300

Genome Context

<gbrowseImage1> name=NC_008403:1520796..1525412 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:1520796..1525412 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtcacagcaggggcgatgagagctctcctccccaagcttgctaagctgctcaaggatgaatacaaccttgagaagcatgtgagggaaggggtcaagtctctggagatagagctcacgatgatgcatgctgcactccgtaaggtggctgaggtgcccctagaccagctagatgatcaggtcaagatctgggcatccaaggtgagagagatctcgtacgacatggaggatgccggtgatgcattcatggtacgtgtggaagatgactcccatagtgggcccagtaccttcaagaacagagtcaagaggcctattaaaaagataagcaaattgttcagaaaggcaaaggagctccatcagattgctgatgccatcaaggaagcccaagccctcgcgcagcagatggctgggttgcgtgaaaggtacagcggactcgagctgcaaaacagcggcatggttactagtactattgatccacgcttgacagcattgtacatcgacgcaacagatcttgttggtatagatcacgctagggaggaactgatcaagacattgacagaaggtgaagattcatccaagcagcaactgaagattatctccatcgttggctttggaggaccgggcaagacaactcttgcaagagcagtgcatgagaaaattgaagcacagtttgattgttcggcttttgtttctgtctctaggaatcctgacgtaagaatgattttcaagaagatgcttcatcaattggacaaagtaaaatatgcaaacatcaatgaatcatcaagggatgaaatacagctcattgacgaattgagagaatttcttcaggacaagaggtactttatcataatcgatgacttatgggacgagagagtatgggactatatcaagtgtgcttttcctaaagacaatcttggcagtaggttaatcatcacgacccgcaatgtcaatgtatctaaagcatgctgctctgccaataatgatataatctataaaatgaaacctctttctgaagatgactccaagaaactcttctataaaagaatatttcctcatgggaatggatgtccttgtgaactagaggaagtatccaatgaaattttgaaaaaatgtggcggtgtgccattagccataattactatagcaagccttttggctaataaggagttacagacaaaggatcaatggtttactttgcacaattctattggacgtggacttacagaaggccgtaatgttgaagacatgcagaaaatattatctttcagctattatgatctaccttcacatctgaagtcttgtttattgtgtctgagtgtattcccagaagattatgagattaggagaaaccggctgatatggaggtggatagcagaaggttttgtgcaacaaacacaaaatggtggtagcttatttgagcaaggtgaaaattactttaacgaactcgtaaatagaagcatgatccaacccattgatatcgatgctgaaggcagagcaaaagcttgtcgtgtacatgacatggtgcttgatctcatatgccacatgtcaagccaacaaaacttcatcactgtgttcaatgatattgggaatatcacatgttcacgaaacaagcttcgacgtttgatgtgcctacgtgttagctttgacacaaggctgccagacaagctaggcgaaatgacatcgctagaagagttgtcgagtatctcaactagtaaatgtgtagacattgtgaaagagctgcgccaactgaccagactgagagtgcttgccatcgaatgggaagaagtgggtgagaagcaggacaaagctttagtagagtgcctgggaagtttgcacaggctgcagatcctgaatatctacgcatttggtggatgtctgaatctgatgcaggaaggctggatgccccctacatgtgggttgatcaagtgcgaccgggggatatacaaatccttggagaactggcagcatagaggagcgtgtagtggagagatttgtggtcagcaccaacgccttccaacgcgcgacagagtgccatccatgttcccacgaggagccatgccgagggttaggtaccttgagttcagcctccgagcatgggacaacgacatggccatcggtaatggtagcagtggtgatctcgacttggccatgggacatctcccttcactggagcgtgtgagcgttacgctcttggtgcacgaggtctga</cdnaseq>

Protein Sequence

<aaseq>MEVTAGAMRALLPKLAKLLKDEYNLEKHVREGVKSLEIELTMMH AALRKVAEVPLDQLDDQVKIWASKVREISYDMEDAGDAFMVRVEDDSHSGPSTFKNRV KRPIKKISKLFRKAKELHQIADAIKEAQALAQQMAGLRERYSGLELQNSGMVTSTIDP RLTALYIDATDLVGIDHAREELIKTLTEGEDSSKQQLKIISIVGFGGPGKTTLARAVH EKIEAQFDCSAFVSVSRNPDVRMIFKKMLHQLDKVKYANINESSRDEIQLIDELREFL QDKRYFIIIDDLWDERVWDYIKCAFPKDNLGSRLIITTRNVNVSKACCSANNDIIYKM KPLSEDDSKKLFYKRIFPHGNGCPCELEEVSNEILKKCGGVPLAIITIASLLANKELQ TKDQWFTLHNSIGRGLTEGRNVEDMQKILSFSYYDLPSHLKSCLLCLSVFPEDYEIRR NRLIWRWIAEGFVQQTQNGGSLFEQGENYFNELVNRSMIQPIDIDAEGRAKACRVHDM VLDLICHMSSQQNFITVFNDIGNITCSRNKLRRLMCLRVSFDTRLPDKLGEMTSLEEL SSISTSKCVDIVKELRQLTRLRVLAIEWEEVGEKQDKALVECLGSLHRLQILNIYAFG GCLNLMQEGWMPPTCGLIKCDRGIYKSLENWQHRGACSGEICGQHQRLPTRDRVPSMF PRGAMPRVRYLEFSLRAWDNDMAIGNGSSGDLDLAMGHLPSLERVSVTLLVHEV</aaseq>

Gene Sequence

<dnaseqindica>4318..4617#3927..4223#2799..3573#1..839#atggaggtcacagcaggggcgatgagagctctcctccccaagcttgctaagctgctcaaggatgaatacaaccttgagaagcatgtgagggaaggggtcaagtctctggagatagagctcacgatgatgcatgctgcactccgtaaggtggctgaggtgcccctagaccagctagatgatcaggtcaagatctgggcatccaaggtgagagagatctcgtacgacatggaggatgccggtgatgcattcatggtacgtgtggaagatgactcccatagtgggcccagtaccttcaagaacagagtcaagaggcctattaaaaagataagcaaattgttcagaaaggcaaaggagctccatcagattgctgatgccatcaaggaagcccaagccctcgcgcagcagatggctgggttgcgtgaaaggtacagcggactcgagctgcaaaacagcggcatggttactagtactattgatccacgcttgacagcattgtacatcgacgcaacagatcttgttggtatagatcacgctagggaggaactgatcaagacattgacagaaggtgaagattcatccaagcagcaactgaagattatctccatcgttggctttggaggaccgggcaagacaactcttgcaagagcagtgcatgagaaaattgaagcacagtttgattgttcggcttttgtttctgtctctaggaatcctgacgtaagaatgattttcaagaagatgcttcatcaattggacaaagtaaaatatgcaaacatcaatgaatcatcaagggatgaaatacagctcattgacgaattgagagaatttcttcaggacaagaggtacccatgaccgaacagagaacatatacctttctttaccttctaggataagcataaatgatgatttctgctcaattgcttaagccgatccttttttaaaaaaatatatatatctttagctgcgggtatttcatttctttgctacgcaacattcttttttttttctcttttgttaaataatctcaccattattttggagtctgcatggatgcatgtctttagtactgtgttggtaatcattgtatataaatacattgttcttataagtatctactccctccaattcgataatacttgtcatttaggacaaatgcacggtcttcaaaagacaacttcggccactatatatatatatatattgcactcgagcacacatgcacccacaatctacacactatatataggttgcacgaatcttagagcaggtacattaggtactaacaaaatgtaccatcacatgatgtttactttatacaatattttttacaagtgcaaaataccttgttgatgtaattttttttcttatatgtaaaacattgaggttatcaaattatcagatcaaatttaccttgtttatataaattaccttgtttatataattacctcatttatgtagttttggatggtaggatatatcatttttgcaagatgataatttggtgatataatagatgtaacattttctcatgttgactaaatatcatgttataaaaaaataagggttagagaaatatcatgcacaaatttcatatataattgttattgaaaaaaatatttggtaaaaaaatgcaacatacttattatatgtgttgtgtaccaacctaatcttttctttttatagtaagaattcatttgatcaaggttaggtacattttgcagcacgaatcttggaacacatcaacggtgtagattgtgggtgcatgtgagctcaaatgcaaatctgcattttcctatatatacaacgaatatatggttttatcattgtatctttcaagattaatctatacatatagtttccatgcttgtaaagtaaaacattttaaaatttatttatagtcaaagttctaaaattttgagtcttgtccaaaacaacaagtattatgtaaccagagggagtagcatttttctcgtctagaatctgacacttcttaatttaatattccctctgtcccattttaagtgtagttgtgtattttcgtgtccaatgtttgatcgtccgtcttatttgaagattttttaaaaaaatacgtcacgcataaagtactattcatgttttatcataagtgaagtgcaccagcggtccttaaatttatgtgggtgtgtcatttaggtccctgaattctcaaaatgcatttttgggtccccgaacttgtcatgggtgtcatataggtccatccgctaacgtgacatgccacgatagcgcctacgtgtcagtggggaccccacatgttagtcatatgtataaaaataaaattaaaaaactatatttcttctcttaggtaaagaggaaaaagataaaatttaaaaatattaattataaggtagagaggagaaaaatatgtttttaaattttatttttttctatgtgaatgcatgtgggtccccaccgacatgtaggcgtcaccgtgacatgccacgttagcggatggacctatatgacacacaggacaagttcggggacccaaaaatgcattttgatagtttagggacctagatgacatacctatacaagtttagggaccgttggtgcactttactcttttatcatctaataaaaaaatactaatctaaaaattcaaaaaagataacggttaaatgttggacacagaaacccacaagtgcaattaaaatgggccggagggagtaacgacttcctaactaggaaaaacatcaaagctacaaattttatatatatttgttttccctgttaatgccaaattctcacaagctaatattcaggtactttatcataatcgatgacttatgggacgagagagtatgggactatatcaagtgtgcttttcctaaagacaatcttggcagtaggttaatcatcacgacccgcaatgtcaatgtatctaaagcatgctgctctgccaataatgatataatctataaaatgaaacctctttctgaagatgactccaagaaactcttctataaaagaatatttcctcatgggaatggatgtccttgtgaactagaggaagtatccaatgaaattttgaaaaaatgtggcggtgtgccattagccataattactatagcaagccttttggctaataaggagttacagacaaaggatcaatggtttactttgcacaattctattggacgtggacttacagaaggccgtaatgttgaagacatgcagaaaatattatctttcagctattatgatctaccttcacatctgaagtcttgtttattgtgtctgagtgtattcccagaagattatgagattaggagaaaccggctgatatggaggtggatagcagaaggttttgtgcaacaaacacaaaatggtggtagcttatttgagcaaggtgaaaattactttaacgaactcgtaaatagaagcatgatccaacccattgatatcgatgctgaaggcagagcaaaagcttgtcgtgtacatgacatggtgcttgatctcatatgccacatgtcaagccaacaaaacttcatcactgtgttcaatgatattgggaatatcacatgttcacgaaacaaggtacgcaggttatctctccaacatagcaccacagagtgcaataccccttggtgtaccctgactatgcttcaagtgaggtccttcactatgtttagtcctgcaattaacttaatgccatccctttcaagctttaaaatgataggagtattggatttggaaggttgtgacttcaccttagatacctaggactacgagacacatacattataaaatggaatagtaaatatgcagaaagccataccgccacatatgttggtcacgagctctcagtgcaaattggcaaactagagtttttgcagacactggacttagttggatctcgtataaacaagttgcctgccactattgttcagcttcgacgtttgatgtgcctacgtgttagctttgacacaaggctgccagacaagctaggcgaaatgacatcgctagaagagttgtcgagtatctcaactagtaaatgtgtagacattgtgaaagagctgcgccaactgaccagactgagagtgcttgccatcgaatgggaagaagtgggtgagaagcaggacaaagctttagtagagtgcctgggaagtttgcacaggctgcagatcctgaatatctacgcatttggtggatgtctgaatctgatgcaggaaggctggatgccccctgtatctctccacagatttctgtccaaaggatctaccggttcgttctcgactctgccgacatggatcaacccattgctcctcatcacctgtatagacatgtgggttgatcaagtgcgaccgggggatatacaaatccttggagaactggcagcatagaggagcgtgtagtggagagatttgtggtcagcaccaacgccttccaacgcgcgacagagtgccatccatgttcccacgaggagccatgccgagggttaggtaccttgagttcagcctccgagcatgggacaacgacatggccatcggtaatggtagcagtggtgatctcgacttggccatgggacatctcccttcactggagcgtgtgagcgttacgctcttggtgcacgaggtctga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0124300, RefSeq:Os10g0124300