Os10g0172600

From RiceWiki
Revision as of 21:05, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0172600

Description

Conserved hypothetical protein

Version

NM_001070773.1 GI:115481289 GeneID:4348191

Length

3331 bp

Definition

Oryza sativa Japonica Group Os10g0172600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:4646804..4650134

Sequence Coding Region

4647696..4647740,4647825..4647912,4648897..4648977,4649749..4649762

Expression

GEO Profiles:Os10g0172600

Genome Context

<gbrowseImage1> name=NC_008403:4646804..4650134 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:4646804..4650134 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ccacatcaacctccacctgggattctagatttcaaggaagcagaaatgggggcaaaggggatgggcacctggttgttcttgttcttttctgatggggcagatgggatggagacttgtgggtggagccgtggaggcgacaagggtttattgcttcgtgcacaaggttcctgtctgcggcgaatgcatccgcttcccggagcatcagttatgcgtggttggcacttttag</cdnaseq>

Protein Sequence

<aaseq>PHQPPPGILDFKEAEMGAKGMGTWLFLFFSDGADGMETCGWSRG GDKGLLLRAQGSCLRRMHPLPGASVMRGWHF</aaseq>

Gene Sequence

<dnaseqindica>893..937#1022..1109#2094..2174#2946..2959#agcctaaactccatccacagtatccactccgccgccaccaccgtccccttcctcctcctcctcctcctcctcccacccgccgccgcggccgccgctgctcatcaccatctccttcaccttctctttccccacactcacgccgccgcctaccacgccgtcgtcgtccttctccgggaacggccgggaactgcacctccattcccaccacctcagccgagcccctcccctctcgacctctcgcggctctctcccaacgctctctctctctctctctctcgctgtctctctccctcccttttctcaagccgtctcatggcgcctgcccacggtcggcggctggccagcaaaggcggcagcggcaaccacgccctcccctccgccagatccggcgggagggcaggcgcagtgagagggcctcctccgacgtcgaccgcaagacggcctccgcgccgctatctcatcttcccgttctctccccaccccgagcgatccatccattccccctcccctcaagcgattccccggttccccttcgcaatccgcactcaactcccttccaagatccgattccccaaccactgctcagtcgcctaaaccctagcgccgccatggattcggctacgctctcgcccaccaccaccagcacgcagcagctcgccgccgcgctagatctgggactgggaggatgaggggtgggtgggtgtggctgcttctgcggtcatcgacgccgcccccgcctcctcctgctccttgttattctcctccctagcatccacgatcacgctgcctccagccctctactggtacatccacgctacctccagccctccagccatctaacccgggtcctgcacatagctcccctgaggaacgccgccatcatcccttctgaccacatcaacctccacctgggattctagatttcaaggaagcagaagtacgaggttgtcttgcccctctctccttcctcttcccctcccctcccctaacgcttcttcttcttgtgtgcatttttttgcagatgggggcaaaggggatgggcacctggttgttcttgttcttttctgatggggcagatgggatggagacttgtgggtggagccgtggaggtagagactgaatcttatttttgtttagatctgatgctaatgaatggatgtgatgtgagatttggtggctgattagtttgtgatgcagtgcatattctgaaaatagagaataacattttagatgcagattatttttgcttagtgatgtttgtagtgggatttagtgtagtaaaaattgcttcttcaatagtgattctattgactgattttgtctgcattggttccacaagaaaatttttttttggtctgcagatgcatatgttgtgcacacttgtgattgcaatgtgagggtggtttgctcctgtatgctgtagcgtattactatatgaaaacctaagtaagcattgactaagataaaaacaatatcgtgttctctctacattggttccacaagaattttttttgggtctgcagatgcatatgttgtgcacacttgttcttgcaatgtgtgggtggtttgctcctgtatgctgtagcgtattactatatgaaaacctaagtaagcattgactaagataaaatagtatcgtgttctctattagtacttaaaaactctgcagaaaatactgatacattcaaattgatttaggctgaagctgtctcatcaggagaatccttgaaactaagtccagaggagcggctgcaggaccagagaaagtaaccatatatcagccactctaaaatcatggtaggtaatcaggagattaaaatgaaattgaaatcatatcctggcatgattcttgtgtgatgcatatactagtatgtgtaggagttgggagttgcattctcatccattagaatatgaacaagagcatctctgaattagtaaaaggaccatataataatttcagctgtagaacatgtgtaactaataggatataaatattttgatttatctaacaagtagaaagattagttatagttcaaaattatgagtgtgccagctgaatttcatgcttatggctgtatttgtttgctttgcaggcgacaagggtttattgcttcgtgcacaaggttcctgtctgcggcgaatgcatccgcttcccggagcatcagttatgcgtggtgagcctctcggcctgttgcatatccttggattccagagtacagtagagtgattgcattctgaataagttaagctatcatgagactatcacaatgtttctatattgttttttatggttgtatttcacagtttcagctgccttgttgggtaattgggaattgttggttaatgatatattgggcttgattacctttaaacctacagtgatgtaatcaaaatgttcacaaaaccttgtgccactaacttgatccattatcttaaaaaagtttagtaggtgaggcaggtgatgtttagcagatttcattttgtgtgagcttattactttgattcgagcacaaattcatgtttggctaggtatatacatattggatatgaggtacatttgagatcttttgattctgtcaggaggaattggaacatgccagctacatctgataattctagatttattatagcagttttcagattgactataagataattcatgtaatcttcctgagttatttaaccacatagcttcctaagatacatcaacataaatttgatattctcaggtggtaaaataattattccataatccagtttatagctctgtttggatcagctctatttgcatttttaatgtaatagtgaccactgaaaacaaatgaaaatggcgttgcaaggaaatgacagatgcatagtggttctattacttatgctatgtaactgcgtcatgtgcaggacaaatgtgccaaaaaccaaatgtgatatctgttggttgcttgcaggttggcacttttagtggccagagtatttttttttgcgttggttgctggaacgcaggattttttggcactagttgctgactgctggcaggatgcaggccggaagtgcagcggctgcttggtggaatttttttgctggctactggcaagatgcacgccgccgaaacttagtggctgctaggtggaattttttggtgcaggaacttggcactacctgtaggaactttgtagtcagctgggacttgtgtagttggatggtggatggatcattttgtattcatgttttgtgcttttgtatggaaatatgttggaaactgtattttggaacttgcttttgtatgggctagaaaattaattatggctggaatgtgattataatataattatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0172600, RefSeq:Os10g0172600