Os10g0199500

From RiceWiki
Revision as of 21:06, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0199500

Description

Protein of unknown function DUF6, transmembrane domain containing protein

Version

NM_001070833.2 GI:297610233 GeneID:4348257

Length

6519 bp

Definition

Oryza sativa Japonica Group Os10g0199500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:6627666..6634184

Sequence Coding Region

6631732..6632028,6632254..6632412,6632642..6632793,6633994..6634054

Expression

GEO Profiles:Os10g0199500

Genome Context

<gbrowseImage1> name=NC_008403:6627666..6634184 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:6627666..6634184 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgttgcaaatatatgatctcactgaatcatatggatatgctgtatcaacatatggcagactggagacattcgaaattggaagcatagttggggtactgaagatagtgggtgttctgctctctgtgggtggcacaatgcttgtcagcttatacaaaggcaagtcactgcatctctggaattccattttgcagcaccaaaatgaaccggccacaaaaactgcaaccaatcagctaagagggacaattttattggttgccagcagctttgcctatgcttgctggtaccttgttcagtcaaaagttctgaaagtgtacccatacaaatattggtcttccatgataacatgcttggttggaggatttcaggtagcatttgtcggaatcatattaaggagacataagagtgcttggaagctaggatgggatctcaaccttgttactgttgtgtactcaggtgcacttgcaacgggcgggaaatatagccttaattcatgggtagtggctaagcgaggtccagcctatcccccgatgttcaacccactatcagtggtcttcactgttgtgctggactccgtccttatgggggatgatgtgacagtaggaagtatcataggcacagcaatggtgattgttgggctctatctttttctctgggccaaagcatga</cdnaseq>

Protein Sequence

<aaseq>MVLQIYDLTESYGYAVSTYGRLETFEIGSIVGVLKIVGVLLSVG GTMLVSLYKGKSLHLWNSILQHQNEPATKTATNQLRGTILLVASSFAYACWYLVQSKV LKVYPYKYWSSMITCLVGGFQVAFVGIILRRHKSAWKLGWDLNLVTVVYSGALATGGK YSLNSWVVAKRGPAYPPMFNPLSVVFTVVLDSVLMGDDVTVGSIIGTAMVIVGLYLFL WAKA</aaseq>

Gene Sequence

<dnaseqindica>4067..4363#4589..4747#4977..5128#6329..6389#tgcgggcgcaccagatggacatcgacggcgcgggcactaaggcggcagcagcgggatggaaggcgccggcgtcgatggtgctggtgcagctgttcatcacggggatgatcatgctttccaaggtgtccatcggcggcggcatgttcatcttcgctctgctcgcgtatcgcagcctcttcggcgccgtcttcatcctcccctttgccctcatctttgagaggtttcttgtttcctactcttattcgcatgcaggccagaagaacattattgcactaaactagtgatggggggttaatttagggctcatctacggcatttagatggccatatatatagtagtttttaacttaaattggaagtattttagttttcgtgcaaccaaaaacagcgtttttctagtctagttgaaattgtgaatcattggatgctatggataacgccatgcgtaaacttgtggctcaatgatggataggtatcgccagcaggtatcattagcagtctgtaggatatgcatgcactgtaaaaaaacaggtgccgtgatgaaaatatagattctatttttgctaaactttgttttgtgtagagggaagtggagggacatggattggcgcgcattcggatggatcttcttcaatgcctttatcgggtacgcatatatgtttctgaatctgaagcttcaaattactgtcaagtttccattatttatacatcctccgaataaaaatgtactcggttttaacaaaatatactagatcatatactagtattttggagaacctcaatgaccaaggaacgagcggcctgagtttaacaaaaatacccatgatgtattactcatgcatgcatttatcaatatacctaatgttactgtaggcatacgtcgcatatacgtaatccagggctactatttgggattttagaggtaaacatcacataaatataagtgcttcctatactatatgtgtgtccttttaaaagacccttagaactatactccctgttcgacaatacctattattttggacaatgacatgattctcgaaacatagtttgtttgggattttctattgtagtgcacacaataaataaatatttgattttgttaaaatatttttaagactaatctatatattgttctattgccttcaaaatgaatattcaaatgttattgatactcaaaattctatacctcaaaaacaccaaaataacacacaaaaagaaatatctatcggttcttttgaactcagaatatggaaactacactactagacaaaaaattttggtgactgccccacactcttgttatggtcatgctgaatagtcatgaaaaacactctctcgccacacaagtgtgtcacagcatcacaaaatttagttgttcggtgactgaatggattatgtagtcacaaaagtttacatgaaaattatttagttaggtttaaaagtattatttataatattggtgacggttatatttcaaagctgtcaccgttgatcccgtaactgatttaattgtgacaggctgaaaagaaaaaaaagaaaataccagagagaaatagattattagcttatttagaagagttcagctctgtttctctctccacctcctcattcctctcgttcccctcctctgctctctattcttatcctagagaggattcgatctccccttacagcgatgcttgtcactggccgcgtcaaccgttgagccgccgcgtgttctcctcatccgcgtgctattagataaaaaatgaattgattggccaaatatgtatggcaaaccaaagtagctgtatcaaccgctgaattgaaaaatcaagattataacaaaataccaactgaaactatgggttgtcttgttccatactaaaaccaaaaccagagtttgttatagcattaaagaaggtgacgatagcgaatgttttgctagtagtacaacttgtattttgatatgcttgcgcatacaaaaagaattcgtaacgaaaggctgtcagtctgtctatctctctttcttaattatattatagtttaatatataatttgtttttcatttattttaatatttggtagtatgcatgtctcctctcgttatgagtatataagaatatttcgaatgaatgaaaacgaacaaaagcactgcatgataaataacagaaacttagcacatcgcggcccaaacgaaaatgagaaactttatgagcttggcattccgatatagtgccagtgacctcttggtttcatttcagttgtgtcctttctaaagtctgtgatggacacgatactgccctcagtttccatcaattcccattgtatgcattcggcctcttgcacatcttgtcacattcttccagaacaattgtttaaaatgataagcatacattttaatttaaagaaggttaaagatattcttgattcgatatacatgctccgatattcgtttcaaaaaaaaaatcgtttcaaaaaaagatatacatgctccgatatttctttcaaaataggtttggcaaagcatagaactaaatatacattttttaaaaaattaaaatgttcaaacttacacctcttcactttggtgtctgtgtagtctgtaactctgtatgaataataagtcaacttaagattttacggaagcacttaatttgttaggaggattgcttcaacggcaaaaatgaagctactagatccatccaatagctttgctggaagatatcttttgcacaaacctcgttgagatcttcaccagaaattatgaaatcatgatatgttcagttgattaccatataatagtaattaacttaattctatagggatacaaatgggacccggatccattgtctttaggcgctaaaggcagagatgctgtctagcactacaaaagaaaacagtgatttgtatttattcactgtagcaacagcgtagagcaggaaactgaactgtaccatgctactgtttattttgtacatcgatcttgctggttcactccaaagtcatggtactaatacacatctgatttcaccttgcgatatatatatttgtctgttcactgttcagagacgctgcgacaaagaatctttgctctaataagatactcactctgtcccatataaaatcaaaccctagcatctcaatgtaaaattaggagagagggaaaatgaccaaaatacctcttattattaaaaaaatagtaatgatgataggatgataaagggtattggagaaattaaatttctcattttacgtgctgatagtagataggatggtagaagttggtttttcgtgggataaaattcaaactccagaggttgattttttttttttttgggacggagtgaatagaaatttactgatggcaaagccaatttggtgaaagactgttacatatataggagaaccaatttgacagtacgtgatcaataatcactttagtgttgaccagttctaattaattatctgagacatggttttcatctttcttctcacatatcaaactatgcaggtatgcagttccaatgagcctttacttctatgggctcaaggacaccactgcatcctacgcagtcatctttataaacatcattcccctattcgccttcatcctctcactcatgttcaggtaaaggttccatttgcaaggttccattcgccttctttgttgtgtacaatgtatttcaatacttataggttccaacaataattgttaatagattttattacttgagaaagtatctttagttatcaaaaatttaaactaaaagttttggtaccttagggtacagggttcctagtatctcgggcttagatattaagttttacagtagaaaacataatatcaaccagtatcttcttaacaatggtaaaattagctataattatttcatggaatgaaagtaatgcacttgatagtaccatggcaagcagtgtgtgatttcaatcctcatgtcccgtgttcaatctccagcatgcttacaatttctcttaagaaatatttggagggacgtatctccctccaaatctcgtttttaatttcatggaatgaaaaaagatgaccatttttgggtaaactcgaatggtgttgcaaatatatgatctcactgaatcatatggatatgctgtatcaacatatggcagactggagacattcgaaattggaagcatagttggggtactgaagatagtgggtgttctgctctctgtgggtggcacaatgcttgtcagcttatacaaaggcaagtcactgcatctctggaattccattttgcagcaccaaaatgaaccggccacaaaaactgcaaccaatcagctaagagggacaattttattggttgccagcagctttgcctatgcttgctggtaccttgttcaggtaatcacgagcaattttacagttcttaggagataccactttttctattgcaaatttggtacctcttagtacctaaatactatgagatacaaaaatttacactaaatttttggtacctcctcaagaactataaaattgctctaatcacaaacttaccttttaatagaaacatatatactagaataatcttatgctgatatttccatgttgtaactgtatttgcagtcaaaagttctgaaagtgtacccatacaaatattggtcttccatgataacatgcttggttggaggatttcaggtagcatttgtcggaatcatattaaggagacataagagtgcttggaagctaggatgggatctcaaccttgttactgttgtgtactcagtatgtcttcaaaccttcctagttcttgaaattaacttaactagaagctacaatgagaaaagtataatattttgtttcctattcttggggtgtccagtgtagcttgagttgtagtattaactaatagtcctggagttataatatgattttgaaggaataatgaattttcatgaaacacaataggcctaattgttctacggatattgacatcaaaaccactttggtgtagggtgcacttgcaacgggcgggaaatatagccttaattcatgggtagtggctaagcgaggtccagcctatcccccgatgttcaacccactatcagtggtcttcactgttgtgctggactccgtccttatgggggatgatgtgacagtaggaaggtcagttgcaatcatttgtactatctatgatgcatgttcggtatttccaacagaaaatgcatgtcaacccattatcagtggtcttgctaagccgaatttgcatgacacccaattttacatacgccgtgtttagtttcaaaataattcttcaaacttccaactttttcatcacatcaaaactttcctacacacaaacttccaactttttcatcacatcgttccaatttcaaccaaacttccaattttggtgtgaactaaacacagccgtagcctaaaaacacattccaaagtggcatgcatatttctgacagtaatggataattatctacggtgaacaaccaccattacacaaatgggcaacagtgaacggtattgaccaggcactaaccaagcggcatatcattgccaaaagaaaaggctcgaaaaatgatcatattttacctgatatatattgggtttggaagtcttgatgttttatctgatatgttcggcatttgaatctgaatatctctctccacgcatggcttacgtagcatcttacttctatctaagcatagcttttttggcatctaaggaaacacatgttttcttttaactctaatagttcaaaaattcaaatgcatatttgagcctctatataacttcaaacaaaaaattaatcagatgtatagtagatataaacaaattatacagttttgacataaaaattatctccaaccgaaattaaaattttaaaaatggttttgtttttcatagaagatctcaacacttctaacatatatcttggcatgtaaaagatctacaataaaaagatcataaattacaaggttatatatctcagcaaattctacgatttcgatctaaagcttgtcttcatccaacttctccatttttaaaaagaaaattcattatgatgcttccgtacttagtggagaggatggttcagtcattgggcaggacgactgtatgctctattatgtaacagaactagcgatgatatattagtgctggttcataacaagaacctagtagtattacggccagatataaaggaacaggccgtgatgggattgttacaaaggtcatttctgtagtactgaacaacaaaaagaaacaagtgacgaagctggtcatgtgagcagtactttaatattcgaccataacatttgatttagttgctctcttattttgaatgtgcagtatcataggcacagcaatggtgattgttgggctctatctttttctctgggccaaagcatgagaagtacctaggcagtaaacatatagtgtagattccacataagttcttgaagatacagaatacactggagttgtatatgtagacaatgagatgtatatttatatagcagtaatttaaatgcaaaaacaat</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0199500, RefSeq:Os10g0199500