Os10g0380800

From RiceWiki
Revision as of 21:07, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0380800

Description

Similar to Tyrosine decarboxylase 1 (EC 4.1.1.25) (ELI5) (Fragment)

Version

NM_001071021.2 GI:297610398 GeneID:4348505

Length

1581 bp

Definition

Oryza sativa Japonica Group Os10g0380800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:12616734..12618314

Sequence Coding Region

12616734..12618314

Expression

GEO Profiles:Os10g0380800

Genome Context

<gbrowseImage1> name=NC_008403:12616734..12618314 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:12616734..12618314 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcacctgcaccctcgcactgccacgccacgaatggcaacaatggcgccatcgccgcctctgatacgccggtgaagacacagcattgcgcgcggctgctcgacgccgacgagttccggcgtcagggtcgtctggttgtcgaccttatcgccgactactacgccggcatgggggaataccccgtgcaccccaccgtcagccctggcttcctccgccaccgcctcccggcggagccgccgtcccgccgggagcccgacgcgttcgccgcggcgatgcaggacgtccgtgacgtcatcctgccggggctgacgcactggcagagcccccgccacttcgcgcacttcccggcgtcgagcagcaccgccggcgccctcggcgaggcgctcgccgccggcatcaacgtcgttcccttcacgtgggccgcctcgcctgccgccaccgagctggagatggtggtcgtggactggctcggcaaggcgctccacctgccggagcggctgctgttcgccggaggcgggggcggctccatcctcgggaccacctgcgaggccatcctctgcgccctcgtcgccgctagggaccgcaagctggcggcgatcggcgaggggaggatcggcgacctcgtcgtctactgctccgaccagacccacttcgcgttctgcaaggccgcgcgcattgccggcatccggcgcgagcattgccgcgagataccgacctaccgggacgacgcgttcgcgctctctccggcggcgctgcgggccgccatgcggcgcgacgccgacgccggcctggtcccgctgttcgtgtgcgccacggtcgggaccacccagaccaccgccgtggaccccgtcggcgagctctgcgccgccgcggcgccgcacggcgcctgggtgcacgtcgacgcggcgtacgcggggtcggcgatggtgtgcccggagctccgcggcgcggtcgccggcggcgtcgaggccgtggactcgttcagcatgaacgcccacaagtggctgctggcgaacaacgactgctgcgtcatgtgggtgaggacgccgtcggcgctggtggcggcgctgggcacggaccaggagtacatcctcaaggacgccgcggcggagacggcggcggcggacggcggcgagggcgtcgtggactacaaggactggggcatcacgctgacgcggcggttccgcgcgctcaagctgtggctggtgctccgatgctacggcgtggagggcctgcgcgagcacatccggtcccacgtcggcatggccgccgcgttcgagggcatggtcagggccgacgcgaggttcgaggtggtgacgccgaggcggttcgcgctggtgtgcttccggctccggtcacccaacaagaagacggcgaacgagctcaacaggcggctcctcgaggaggtgaacgcggccagctcgggaccgtacatgagctccgccaatgtcggcggcgtgtacatgctcaggtgcgccgtcggcagcacgctcaccgaggagcgccacgtccgggaagcctggaaggttgtccaggatcgggctacgtccatcctttcgaaaatggagattattatgtag</cdnaseq>

Protein Sequence

<aaseq>MAPAPSHCHATNGNNGAIAASDTPVKTQHCARLLDADEFRRQGR LVVDLIADYYAGMGEYPVHPTVSPGFLRHRLPAEPPSRREPDAFAAAMQDVRDVILPG LTHWQSPRHFAHFPASSSTAGALGEALAAGINVVPFTWAASPAATELEMVVVDWLGKA LHLPERLLFAGGGGGSILGTTCEAILCALVAARDRKLAAIGEGRIGDLVVYCSDQTHF AFCKAARIAGIRREHCREIPTYRDDAFALSPAALRAAMRRDADAGLVPLFVCATVGTT QTTAVDPVGELCAAAAPHGAWVHVDAAYAGSAMVCPELRGAVAGGVEAVDSFSMNAHK WLLANNDCCVMWVRTPSALVAALGTDQEYILKDAAAETAAADGGEGVVDYKDWGITLT RRFRALKLWLVLRCYGVEGLREHIRSHVGMAAAFEGMVRADARFEVVTPRRFALVCFR LRSPNKKTANELNRRLLEEVNAASSGPYMSSANVGGVYMLRCAVGSTLTEERHVREAW KVVQDRATSILSKMEIIM</aaseq>

Gene Sequence

<dnaseqindica>1..1581#atggcacctgcaccctcgcactgccacgccacgaatggcaacaatggcgccatcgccgcctctgatacgccggtgaagacacagcattgcgcgcggctgctcgacgccgacgagttccggcgtcagggtcgtctggttgtcgaccttatcgccgactactacgccggcatgggggaataccccgtgcaccccaccgtcagccctggcttcctccgccaccgcctcccggcggagccgccgtcccgccgggagcccgacgcgttcgccgcggcgatgcaggacgtccgtgacgtcatcctgccggggctgacgcactggcagagcccccgccacttcgcgcacttcccggcgtcgagcagcaccgccggcgccctcggcgaggcgctcgccgccggcatcaacgtcgttcccttcacgtgggccgcctcgcctgccgccaccgagctggagatggtggtcgtggactggctcggcaaggcgctccacctgccggagcggctgctgttcgccggaggcgggggcggctccatcctcgggaccacctgcgaggccatcctctgcgccctcgtcgccgctagggaccgcaagctggcggcgatcggcgaggggaggatcggcgacctcgtcgtctactgctccgaccagacccacttcgcgttctgcaaggccgcgcgcattgccggcatccggcgcgagcattgccgcgagataccgacctaccgggacgacgcgttcgcgctctctccggcggcgctgcgggccgccatgcggcgcgacgccgacgccggcctggtcccgctgttcgtgtgcgccacggtcgggaccacccagaccaccgccgtggaccccgtcggcgagctctgcgccgccgcggcgccgcacggcgcctgggtgcacgtcgacgcggcgtacgcggggtcggcgatggtgtgcccggagctccgcggcgcggtcgccggcggcgtcgaggccgtggactcgttcagcatgaacgcccacaagtggctgctggcgaacaacgactgctgcgtcatgtgggtgaggacgccgtcggcgctggtggcggcgctgggcacggaccaggagtacatcctcaaggacgccgcggcggagacggcggcggcggacggcggcgagggcgtcgtggactacaaggactggggcatcacgctgacgcggcggttccgcgcgctcaagctgtggctggtgctccgatgctacggcgtggagggcctgcgcgagcacatccggtcccacgtcggcatggccgccgcgttcgagggcatggtcagggccgacgcgaggttcgaggtggtgacgccgaggcggttcgcgctggtgtgcttccggctccggtcacccaacaagaagacggcgaacgagctcaacaggcggctcctcgaggaggtgaacgcggccagctcgggaccgtacatgagctccgccaatgtcggcggcgtgtacatgctcaggtgcgccgtcggcagcacgctcaccgaggagcgccacgtccgggaagcctggaaggttgtccaggatcgggctacgtccatcctttcgaaaatggagattattatgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0380800, RefSeq:Os10g0380800