Os10g0399700

From RiceWiki
Revision as of 21:08, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0399700

Description

Similar to Cystathionine gamma-synthase isoform 2 (EC 4.2.99.9)

Version

NM_001071075.1 GI:115481893 GeneID:4348561

Length

1770 bp

Definition

Oryza sativa Japonica Group Os10g0399700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:13824998..13826767

Sequence Coding Region

13824998..13825657,13825754..13826107,13826199..13826521,13826644..13826767

Expression

GEO Profiles:Os10g0399700

Genome Context

<gbrowseImage1> name=NC_008403:13824998..13826767 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:13824998..13826767 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaagtcatcgtccctcgtgacgaaggtttcggcgcagcggcggcggcgagtgcaccgtcctcgccgttctccgaccaagccggagcgctctgccgccgccgtggcgctgagccacgagaagattcttctcgccggcgttgatgcagccgccgacatgttcggttccctcgcgggttgtccctcgtcgccggagtatccggtggtgccggacatggacgaccgctacgtcgacggcgccgtggatgacgctccggcggcggcggcgggccgacgcgcgtcggacgagacgctggcggtgcacgccggggagaagctcgggagcggcgccgctgagacggactcgatcgcgacgccgatcgtgagcggcacgacgcactggttcagggactcggcggacctcatcgcgttccgggaaggccggcggcggagcttcgagtacgggcggtacggcaacccgacggtgaaggtgctggaggagaagatcagcgcgctggagagggcggaggcgacgctggtgacctcctccggtatgaacgccatcgtcgccacgctgctcgccctcgtccctcccggcggccacgtcgtcgccaccgccgactgctacagcgaggcccgcgcattcatccgcgacaagctctccaacatgggcatcacgtcgacgttcgtcgatcttgacgacgacatggaggcgctggaatgtgttcttgatgagagcgaggtgacgatgttctacgccgactcgatgacgaaccctcacctgaaggtcgtcgacgtgacacgcgtggcggagctgtgccaccggagaggcgcgctggtgtgcatcgacagcacgctggcatcgcccatcaaccagaagccgctcgccctcggcgccgacgtggtcctccactccgccaccaagtacatcgccggccaccacgacgtcatcgccggctgcgtcagcggctcggaggccctcatctcgcggatccgcgcgtggcaccacgacctcggcggcgccatcagtccgaacgcggcgtacatgatcattcggggattgaagacgattgcgctgcgggtggaggcgcagaacaggacggcgctgcggatggcgcggctgctggagaagcaccccaagatcgagcgcgtctactaccctgggctggagagcagcctgtggcacggcgtcgcgacgaggcagatggccggcgccggcggcgtggtcagcttcgatgtggcgtcggacttgcgcggcgtgatgaggttcgtggatgcgctggagttgcctctcatcgcaacgtcgctcggtggatgtgaaagccttgtgcagcaaccggccgtcatgtcctactggggtaagagtgaggaggagaaggcgaagaatgggatcaaggataattttgtgaggttcagttttgggattgagaagtttgaggatctcagggacgacatactccaggccctagagaagatttag</cdnaseq>

Protein Sequence

<aaseq>MAKSSSLVTKVSAQRRRRVHRPRRSPTKPERSAAAVALSHEKIL LAGVDAAADMFGSLAGCPSSPEYPVVPDMDDRYVDGAVDDAPAAAAGRRASDETLAVH AGEKLGSGAAETDSIATPIVSGTTHWFRDSADLIAFREGRRRSFEYGRYGNPTVKVLE EKISALERAEATLVTSSGMNAIVATLLALVPPGGHVVATADCYSEARAFIRDKLSNMG ITSTFVDLDDDMEALECVLDESEVTMFYADSMTNPHLKVVDVTRVAELCHRRGALVCI DSTLASPINQKPLALGADVVLHSATKYIAGHHDVIAGCVSGSEALISRIRAWHHDLGG AISPNAAYMIIRGLKTIALRVEAQNRTALRMARLLEKHPKIERVYYPGLESSLWHGVA TRQMAGAGGVVSFDVASDLRGVMRFVDALELPLIATSLGGCESLVQQPAVMSYWGKSE EEKAKNGIKDNFVRFSFGIEKFEDLRDDILQALEKI</aaseq>

Gene Sequence

<dnaseqindica>1..660#757..1110#1202..1524#1647..1770#atggcgaagtcatcgtccctcgtgacgaaggtttcggcgcagcggcggcggcgagtgcaccgtcctcgccgttctccgaccaagccggagcgctctgccgccgccgtggcgctgagccacgagaagattcttctcgccggcgttgatgcagccgccgacatgttcggttccctcgcgggttgtccctcgtcgccggagtatccggtggtgccggacatggacgaccgctacgtcgacggcgccgtggatgacgctccggcggcggcggcgggccgacgcgcgtcggacgagacgctggcggtgcacgccggggagaagctcgggagcggcgccgctgagacggactcgatcgcgacgccgatcgtgagcggcacgacgcactggttcagggactcggcggacctcatcgcgttccgggaaggccggcggcggagcttcgagtacgggcggtacggcaacccgacggtgaaggtgctggaggagaagatcagcgcgctggagagggcggaggcgacgctggtgacctcctccggtatgaacgccatcgtcgccacgctgctcgccctcgtccctcccggcggccacgtcgtcgccaccgccgactgctacagcgaggcccgcgcattcatccgcgacaagctctccaacatgggcatcacggtatgtaaacaccattaatggcagcttcattcatcagagcatggcattgcttgcaatctgtctcttaacaatggcgttcgtcccttgtatttgcagtcgacgttcgtcgatcttgacgacgacatggaggcgctggaatgtgttcttgatgagagcgaggtgacgatgttctacgccgactcgatgacgaaccctcacctgaaggtcgtcgacgtgacacgcgtggcggagctgtgccaccggagaggcgcgctggtgtgcatcgacagcacgctggcatcgcccatcaaccagaagccgctcgccctcggcgccgacgtggtcctccactccgccaccaagtacatcgccggccaccacgacgtcatcgccggctgcgtcagcggctcggaggccctcatctcgcggatccgcgcgtggcaccacgacctcggcggcgccatcagtccggtaaccaaaccaaaaacgaaaacaaaacgaatttacacaaattcactttatatcattccaaaactgattgtaactttatttgtcggttcagaacgcggcgtacatgatcattcggggattgaagacgattgcgctgcgggtggaggcgcagaacaggacggcgctgcggatggcgcggctgctggagaagcaccccaagatcgagcgcgtctactaccctgggctggagagcagcctgtggcacggcgtcgcgacgaggcagatggccggcgccggcggcgtggtcagcttcgatgtggcgtcggacttgcgcggcgtgatgaggttcgtggatgcgctggagttgcctctcatcgcaacgtcgctcggtggatgtgaaagccttgtgcagcaaccggccgtcatgtcctactggtaattaattaagctcgtgtcatgtaacagtagcaaaaggagtacgtaactaagtgctgaattaattgcatgatgataatgttttgattaatgctaatatttaggttgttaattgttttcaggggtaagagtgaggaggagaaggcgaagaatgggatcaaggataattttgtgaggttcagttttgggattgagaagtttgaggatctcagggacgacatactccaggccctagagaagatttag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0399700, RefSeq:Os10g0399700