Os10g0459550

From RiceWiki
Revision as of 21:09, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0459550

Description

Conserved hypothetical protein

Version

NM_001189262.1 GI:297727654 GeneID:9269687

Length

3469 bp

Definition

Oryza sativa Japonica Group Os10g0459550, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17344133..17347601

Sequence Coding Region

17344133..17344250,17344443..17344542,17345057..17345760,17345960..17346059,17346574..17347277
,17347477..17347601

Expression

GEO Profiles:Os10g0459550

Genome Context

<gbrowseImage1> name=NC_008403:17344133..17347601 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:17344133..17347601 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggttagttggttggttcaagcaacgaacgtcggcgaagactcagtacttgtgaagttgcggccaagtaaacgggacgtgggcgtcgtgtgtggcttgagaagcggaacaaccagctttgtcggtagcggtagcggcagtggcgccgacggcagcggcactgatggcggcaacaatggcggccagcagatcatcgtgcagagggtgatgaaggagacggctggctcggtggtctaccccatgttgacgcgcaccaactacaccgactgggctctcgtcatgcgcgtgaacttgcaggctcaaggtttgtggtcggcaattgagcccggctacgcggagtaccaggatgacaggatggcactctccgccatcctccgtgccgtgccgccggagatgttgccgactctggcggtgaaggatacggccaaggaggcgtgggagtcggtgaagaccatgcgcgttggtgttgcgcgtgtgcgagaagcgaaggcgcagaccttgcggaatgagttcgagttgatccgcatgaaggaaagtgagtctgtggatgaattctcgatgaggctcaacgccatcgtcaacaacctccgcatgctcggtgacccactggaggaggagaaggtggtgcagaaatttcttcgtgttgttccttctcggttcgtgcaggtggccattgcaatcgagcaattgcttgatttgaagacgctgtccatcgaggaggtcacggggcgcctccgaactgtggaggagcggtacaggcccggtgacaatgatggtggcgttgatggcggccgcttgctcctcaccgaagagcagtggctggagccaacgaacgtcggcgaagactcagtacttgtgaagttgcggccaagtaaacgggacgtgggcgtcgtgtgtggcttgagaagcggaacaaccagctttgtcggtagcggtagcggcagtggcgccgacggcagcggcactgatggcggcaacaatggcggccagcagatcatcgtgcagagggtgatgaaggagacggctggctcagtggtctaccccatgttgacgcgcaccaactacaccgactgggctctcgtcatgcgcgtgaacttgcaggctcaaggtttgtggtcggcaattgagcccggctacgcggagtaccaggatgacaggatggcactctccgccatcctccgtgccgtgccgccggagatgttgccgactctggcggtgaaggatacggccaaggaggcgtgggagtcggtgaagaccatgcgcgttggtgttgcgcgtgtgcgagaagcgaaggcgcagaccttgcggaatgagtttgagttgatccgcatgaaggaaagtgagtctgtggatgacttctcgatgaggctcaacgccatcgtcaacaacctccgcatgctcggtgacccactggaggaggagaaggtggtgcagaaatttcttcgtgttgttccttctcggttcgtgcaggtggccattgcaatcgagcaattgcttgatttgaagacgctgtccatcgaggaggtcacggggcgcctccgaactgtggaggagcggtacaggcccggtgacaatgatggtggcgttgatggcggccgcttgctcctcaccgaagagcagtggctggagccaacgaacgtcggcgaagactcagtacttgtgaagttgcggccaagtaaacgggacgtgggcgtcgtgtgtggcttgagaagcggaacaaccagctttgttcatcaccggcatcaggtcctcgaagtcctcgccgaagatgcatctggagaggggaagggcggtggccggccacctcgactcatctatcttgagcagcataggcggtgggagagatga</cdnaseq>

Protein Sequence

<aaseq>MQVSWLVQATNVGEDSVLVKLRPSKRDVGVVCGLRSGTTSFVGS GSGSGADGSGTDGGNNGGQQIIVQRVMKETAGSVVYPMLTRTNYTDWALVMRVNLQAQ GLWSAIEPGYAEYQDDRMALSAILRAVPPEMLPTLAVKDTAKEAWESVKTMRVGVARV REAKAQTLRNEFELIRMKESESVDEFSMRLNAIVNNLRMLGDPLEEEKVVQKFLRVVP SRFVQVAIAIEQLLDLKTLSIEEVTGRLRTVEERYRPGDNDGGVDGGRLLLTEEQWLE PTNVGEDSVLVKLRPSKRDVGVVCGLRSGTTSFVGSGSGSGADGSGTDGGNNGGQQII VQRVMKETAGSVVYPMLTRTNYTDWALVMRVNLQAQGLWSAIEPGYAEYQDDRMALSA ILRAVPPEMLPTLAVKDTAKEAWESVKTMRVGVARVREAKAQTLRNEFELIRMKESES VDDFSMRLNAIVNNLRMLGDPLEEEKVVQKFLRVVPSRFVQVAIAIEQLLDLKTLSIE EVTGRLRTVEERYRPGDNDGGVDGGRLLLTEEQWLEPTNVGEDSVLVKLRPSKRDVGV VCGLRSGTTSFVHHRHQVLEVLAEDASGEGKGGGRPPRLIYLEQHRRWER</aaseq>

Gene Sequence

<dnaseqindica>3352..3469#3060..3159#1842..2545#1543..1642#325..1028#1..125#atgcaggttagttggttggttcaagcaacgaacgtcggcgaagactcagtacttgtgaagttgcggccaagtaaacgggacgtgggcgtcgtgtgtggcttgagaagcggaacaaccagctttgtgtatgtgctgtgttataaatagctgctcattgtaatcattttgttaagaagaagaaaagcaagagaaaaggcaccagttgcgtgcttgtgccacaaatactcagtgttctgtgttcttctttcttgtgctcttcacgcgtaagtgtgatttgtgttcactgtgttcgcgtgagttgctttgattcccaacatttggtagcggtagcggtagcggcagtggcgccgacggcagcggcactgatggcggcaacaatggcggccagcagatcatcgtgcagagggtgatgaaggagacggctggctcggtggtctaccccatgttgacgcgcaccaactacaccgactgggctctcgtcatgcgcgtgaacttgcaggctcaaggtttgtggtcggcaattgagcccggctacgcggagtaccaggatgacaggatggcactctccgccatcctccgtgccgtgccgccggagatgttgccgactctggcggtgaaggatacggccaaggaggcgtgggagtcggtgaagaccatgcgcgttggtgttgcgcgtgtgcgagaagcgaaggcgcagaccttgcggaatgagttcgagttgatccgcatgaaggaaagtgagtctgtggatgaattctcgatgaggctcaacgccatcgtcaacaacctccgcatgctcggtgacccactggaggaggagaaggtggtgcagaaatttcttcgtgttgttccttctcggttcgtgcaggtggccattgcaatcgagcaattgcttgatttgaagacgctgtccatcgaggaggtcacggggcgcctccgaactgtggaggagcggtacaggcccggtgacaatgatggtggcgttgatggcggccgcttgctcctcaccgaagagcagtggctggagcgtaggagaaatcgcaagaagaacggcgacacgtttgacaagtcaaaggtccgttgttacaattgccaggagtatggtcactactcttgggagaagaagtgccatgaaacaaagaagaaccatcaggcgcaccttgtggttgcggatgccgacgacgagccgacgctgctttgaatccaagtgagaaggtgtcaaataaagacaacaagattagggggtgattgttagaaattaatcttgttgtttcttaatttcagcatgtttatctatatgcatatgtgtgtgttgcatggtctggagagctagctatatgtacgtgggtgctgcatggcttagtgagtagtggttggcagtgagtagtgagccaataaagagccagtagatgagagcacatgtatgtagcttagttagttagccatgcataattatgggctagtgattagccgagtcttgcacaagattaggagtaggaagtggtcagtttgcatgcatgcaggttagttggttggttcaagcaacgaacgtcggcgaagactcagtacttgtgaagttgcggccaagtaaacgggacgtgggcgtcgtgtgtggcttgagaagcggaacaaccagctttgtgtatgtgctgtgttataaatagctgctcattgtaatcattttgttaacaagaagaaaagcaagagaaaaggcaccagttgcgtgcttgtgccacaaatacttagtgttctgtgttcttctttcttgtgctcttcacgcgtaagtgtgatttgtgtccactgtgttcgcgtgagttgctttgattcccaacatttggtagcggtagcggtagcggcagtggcgccgacggcagcggcactgatggcggcaacaatggcggccagcagatcatcgtgcagagggtgatgaaggagacggctggctcagtggtctaccccatgttgacgcgcaccaactacaccgactgggctctcgtcatgcgcgtgaacttgcaggctcaaggtttgtggtcggcaattgagcccggctacgcggagtaccaggatgacaggatggcactctccgccatcctccgtgccgtgccgccggagatgttgccgactctggcggtgaaggatacggccaaggaggcgtgggagtcggtgaagaccatgcgcgttggtgttgcgcgtgtgcgagaagcgaaggcgcagaccttgcggaatgagtttgagttgatccgcatgaaggaaagtgagtctgtggatgacttctcgatgaggctcaacgccatcgtcaacaacctccgcatgctcggtgacccactggaggaggagaaggtggtgcagaaatttcttcgtgttgttccttctcggttcgtgcaggtggccattgcaatcgagcaattgcttgatttgaagacgctgtccatcgaggaggtcacggggcgcctccgaactgtggaggagcggtacaggcccggtgacaatgatggtggcgttgatggcggccgcttgctcctcaccgaagagcagtggctggagcgtaggagaaatcgcaagaagaacggcgacacgtttgacaagtcgaaggtccgttgttacaattgccaggagtatggtcactactcttgggagaagaagtgccatgaaacaaagaagaaccatcaggcgcaccttgtggttgcggatgccgacgacgagccgacgctgctttgaatccaagtgagaaggtgtcaaataaagacaacaagattagggggtgattgttagaaattaatcttgttgtttcttaatttcagcatgtttatctatatgcatatgtgtgtgttgcatggtctggagagctagctatatgtacgtgggtgctgcatggcttagtgagtagtggttggcagtgagtagtgagccaataaagagccagtagatgagagcacatgtatgtagcttagttagttagccatgcataattatgggctagtgattagccgagtcttgcgcaagattaggagtaggaagtggtcagtttgcatgcatgcaggttagttggttggttcaagcaacgaacgtcggcgaagactcagtacttgtgaagttgcggccaagtaaacgggacgtgggcgtcgtgtgtggcttgagaagcggaacaaccagctttgtgtatgtgctgtgttataaatagctgctcattgtaatcattttgttaacaagaagaaaagcaagagaaaaggcaccagttgcgtgcttgtgccacaaatactcagtgttctgtgttcttctttcttgtgctcttcacgcgtaagtgtgatttgtgtccactgtgttcgcgtgagttgctttgattcccaacagtcatcaccggcatcaggtcctcgaagtcctcgccgaagatgcatctggagaggggaagggcggtggccggccacctcgactcatctatcttgagcagcataggcggtgggagagatga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0459550, RefSeq:Os10g0459550