Os10g0483500

From RiceWiki
Revision as of 21:10, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0483500

Description

FAD linked oxidase, N-terminal domain containing protein

Version

NM_001071421.1 GI:115482585 GeneID:4348932

Length

4196 bp

Definition

Oryza sativa Japonica Group Os10g0483500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18727529..18731724

Sequence Coding Region

18727809..18728382,18728563..18728690,18728816..18729076,18729156..18729418,18731044..18731401

Expression

GEO Profiles:Os10g0483500

Genome Context

<gbrowseImage1> name=NC_008403:18727529..18731724 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:18727529..18731724 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggttgccatggtctgcacaagagttaacctgctcatcctcatcctttctctctgctccccatacaagtttatacagagccccatggactttggccctttgaacctccttcccaccaccaccactgcatccagtgactttggtagaatcctcttccactccccatctgcagttctaaagccccaagctccaagggatatatccctgcttctcagcttcctctctgcctcacctcttggcaaggtgacggtggcagccaggggagcaggtcactccatccatggacaggcacaggcccttgatggcattgtagtggagatgagctccttgccttctgagattgaattctacagaagaggagaaggagatgtttcttatgctgatgtgggtggtggaatcatgtggattgagcttctggagcagagcttgaagcttgggctggctccaaggtcttggactgattacctctatctcaccattggtggaaccttgtccaatgctggcatcagtgggcagacattcaagcatggacctcagattagcaatgttctacagctggaagtagtcacaggcaggggtgagattgtgacctgttcacccaccaaggatgcagagctattcaatgctgttcttggaggccttgggcagttcggcatcattactagggcaaggatcctgctgcaggaagctccacagaaagtgaagtgggttagagccttctatgatgatttcgccaccttcaccaaagaccaggagttgctggtgtcaatgccggttttggtggactatgtggaaggtttcatcgtgttgaatgagcaatcccttcacagctcctccattgccttccctacaaatgttgacttcaacccagattttggcaccaagaacaaccctaagatctactactgcatagagtttgctgtccacgattaccagaacaagaacatcaatgtggaacaggtcgtggaagtcatctcaaggcagatgagccacatagcatcccacttgtatagcgtggaggtgtcctactttgattttctcaacagggttaggatggaggagatgagccttaggaacagtgggctctgggaggtgcaccatccatggttgaacatgttcgtgccaagcgctgggattagtgacttcagggacctgctcatggacagcatctcaccggataacttcgagggcctcatcctcatctacccactcctcagacacaagtgggacaccaacacgtcggtcgtgttaccggactccgggtcgacggaccaggtgatgtacgcggtgggcatcctccggtcggcgaaccccgacgacgggtgctcccaccactgcctccaggagctcctcctccgccaccgccgcctcgccggcgccgccgcgtcgggcctcggcgcgaagcagtacctcgcccaccacccgaccccggccggctggcgccgccacttcggccggcggtgggagcggttcgccgatcgcaaggcccggttcgacccgaggtgcatcctcgggccaggccagggtatattccccagggacagcagcagcagcaatggcgcatttgcaagctatagctga</cdnaseq>

Protein Sequence

<aaseq>MEVAMVCTRVNLLILILSLCSPYKFIQSPMDFGPLNLLPTTTTA SSDFGRILFHSPSAVLKPQAPRDISLLLSFLSASPLGKVTVAARGAGHSIHGQAQALD GIVVEMSSLPSEIEFYRRGEGDVSYADVGGGIMWIELLEQSLKLGLAPRSWTDYLYLT IGGTLSNAGISGQTFKHGPQISNVLQLEVVTGRGEIVTCSPTKDAELFNAVLGGLGQF GIITRARILLQEAPQKVKWVRAFYDDFATFTKDQELLVSMPVLVDYVEGFIVLNEQSL HSSSIAFPTNVDFNPDFGTKNNPKIYYCIEFAVHDYQNKNINVEQVVEVISRQMSHIA SHLYSVEVSYFDFLNRVRMEEMSLRNSGLWEVHHPWLNMFVPSAGISDFRDLLMDSIS PDNFEGLILIYPLLRHKWDTNTSVVLPDSGSTDQVMYAVGILRSANPDDGCSHHCLQE LLLRHRRLAGAAASGLGAKQYLAHHPTPAGWRRHFGRRWERFADRKARFDPRCILGPG QGIFPRDSSSSNGAFASYS</aaseq>

Gene Sequence

<dnaseqindica>281..854#1035..1162#1288..1548#1628..1890#3516..3873#aaaacctcatagcctcatcagctgatcactgagtgccttctccttctcctcctcctttaagaaccctcttccctgcccatccttttcttcatcccctcaactttgcctaaaaggcaagaacaaagccatatgattctctgatcccttcttccaagctgcatcccaacacaacacattgtggtgacacagcaaacataatatacacacatcctcttcttcttctaccaccctccatattcctgcaagaaacaactggaggaagaatcactactccaacaccatggaggttgccatggtctgcacaagagttaacctgctcatcctcatcctttctctctgctccccatacaagtttatacagagccccatggactttggccctttgaacctccttcccaccaccaccactgcatccagtgactttggtagaatcctcttccactccccatctgcagttctaaagccccaagctccaagggatatatccctgcttctcagcttcctctctgcctcacctcttggcaaggtgacggtggcagccaggggagcaggtcactccatccatggacaggcacaggcccttgatggcattgtagtggagatgagctccttgccttctgagattgaattctacagaagaggagaaggagatgtttcttatgctgatgtgggtggtggaatcatgtggattgagcttctggagcagagcttgaagcttgggctggctccaaggtcttggactgattacctctatctcaccattggtggaaccttgtccaatgctggcatcagtgggcagacattcaagcatggacctcagattagcaatgttctacagctggaagtagtcacaggtgagagatgcataatgaaacattaaaaaatattgataaggtcttatatttgcccctctctctctctctctctctctctctctctctctctctctctctctctctttctctcaacgtctttcttgcccaacgtcttttaactgatgggcagtagattttctgttcctctttgcttgacaggcaggggtgagattgtgacctgttcacccaccaaggatgcagagctattcaatgctgttcttggaggccttgggcagttcggcatcattactagggcaaggatcctgctgcaggaagctccacagaaagtatgcagctttagaactgtcctttgcatattagtatattattatatgatcttaaccattatttctgcatgtcatgtttctgacacgcatatatataattaaacaaatctggaatttcattttaggtgaagtgggttagagccttctatgatgatttcgccaccttcaccaaagaccaggagttgctggtgtcaatgccggttttggtggactatgtggaaggtttcatcgtgttgaatgagcaatcccttcacagctcctccattgccttccctacaaatgttgacttcaacccagattttggcaccaagaacaaccctaagatctactactgcatagagtttgctgtccacgattaccagaacaagaacatcaatgtggaacaggtaagctccaaaatttactctgctttttgtgaacttatcaagtcatggtaatgatcaaacaagtcttcatctatttcaggtcgtggaagtcatctcaaggcagatgagccacatagcatcccacttgtatagcgtggaggtgtcctactttgattttctcaacagggttaggatggaggagatgagccttaggaacagtgggctctgggaggtgcaccatccatggttgaacatgttcgtgccaagcgctgggattagtgacttcagggacctgctcatggacagcatctcaccggataacttcgagggcctcatcctcatctacccactcctcagacacaagtaagcagtactgcccactaatgctaaataggcttcacattatgatatgccaacatgagggcacagcaatgcgtggaagcattatttgtgagaaaaaggttatctattggttatttaattgatctctctttcatgatcagcaacattagctgccaagcagtcctagtaggacaagtacttgtctgcattatccaacgtggtgcccctttgtgttatagtattagtcccttttggcattaatatgttggtccattttttttcaattttacaactgcccagtgtagaagatatttacatgcctgattaggttaatatttcagtgtggggcgtctttttgctcttctttggaaacatatgttgctcttttcatagcatttatgatttgagtgtgttctcatcgattctgtaaatgttaatgtcatctatttatgatttggtagcatccagctatttatgatatcaggaagagagcctttctttttaataaatgatgtttgatttatccttctgcctagtcccacttaggttctaaagccctagtatcattacttcatcagtattctcttgttggtcccgcttaggtctgttcttgtggtaagaagtaaagcttctgcttttcacatattaagagggctggggcctgagggggatccattcttgcctaggctttcagcgcggcagataagtttcaggcttgcttcatccaaacgttggacacaagaatgggaatatgcgataagttaggcagttagtttgtctaatgctgtggcagcttatttttgttggaaagttacatgtttgcataaaataattttttggtcgaaagtccacacctacatggctacagcgactttatttgtagactgttgcttgattacgaattgtatcatgttttatgggtccctcaaaatagaatgccagttatcatcagcatattatgattcaactgaagcaatagcttaatcagtggcatcctacttttcagagtagtttggtcacctttgttcagtagcaacagtgaatatagaaacagaagttgcttgatctctcttacattttagttttttgacttcaatgaaaagcataccgatactttggcttgtttgtgcttagataaatatgcttattccagcccatgataaataattatctaggtcaaatggaactaatgttgactatcggcaaactatttgttgtgatgttgacaaggcacaaattctgtgcggtgttaaaaatcaaacaagttttatgatctcattgacctcagatgaaagaatttgtaatgtgatcctccttccaagaagtttatacaagtttatctgcaaggggggtttaaaactactcttggtggcaggcagagtcagctctaatcttgttgaaccaatgaaccttaacaaaagattcatgttcactgtactgaaataatttaacagcaccaatgtggacttcactcccccaaacactaaaacaaacctctcttgagtcagaatacactgaactagtactgaatgtcagctatattatcttgtactgctcatttttttttcatttctaataattctgatactctgttagatgctgggatatcatctaattgttgcactatttatgcctctcactgacaggtgggacaccaacacgtcggtcgtgttaccggactccgggtcgacggaccaggtgatgtacgcggtgggcatcctccggtcggcgaaccccgacgacgggtgctcccaccactgcctccaggagctcctcctccgccaccgccgcctcgccggcgccgccgcgtcgggcctcggcgcgaagcagtacctcgcccaccacccgaccccggccggctggcgccgccacttcggccggcggtgggagcggttcgccgatcgcaaggcccggttcgacccgaggtgcatcctcgggccaggccagggtatattccccagggacagcagcagcagcaatggcgcatttgcaagctatagctgacacgagaaagtgcagtgtagtgctgtgctgtgccgtgccgtgccgtgccgtgacagctggtggtacaataagagggggacataggataggcaggcgaggctaggagggagatcttgttctttcttttcgatagctttcttttctgcttcgatttgaggccggcatcgttttggttggttgatgtggttgggcgggggttgattttgaacggatcctcggtggtggtgatcaccatcatcactgggaattttggaactttgtacaggctgaggaagcaagaacagctctagggcgaaaggatagtgatagcgattctatttcga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0483500, RefSeq:Os10g0483500