Os08g0107300
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os08g0107300 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001067331.1 GI:115474398 GeneID:4344456 |
| Length |
3442 bp |
| Definition |
Oryza sativa Japonica Group Os08g0107300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:356115..359556 |
| Sequence Coding Region |
356115..356561,357944..358064,358291..358465,358572..358642,358922..359556 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:356115..359556 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:356115..359556 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgcttcctcacgccaccgcccatcagcccacgcccagcccgcgcccgcgcctcctccccgtcgccgccgccgccctcctcctcgcctcctcctacctcgccctcacccgcctccccgccgccgcgccgctcgccgccctcgtcgcccctgctactgcacgcgtcgacggggacagggacagggacagctgcgcggggttctaccgcggggggtcgtcggggcggcgcgcggcgtcggcgtcggtggaggagttcggggccgtgggggacggggtcacgtccaacacggcggcgttccggcgcgcggtggcggcgctggaggcgagggcgggaggcggcggcgcgaggctggaggtgccgccggggaggtgggtcacggggagctttaacctcaccagccgcttcacgctcttcctgcaccacggtgcaatcatcctcggctcccaggatccggaagaatggcctctcatagccccattgccgtcgtatgggcgtgggcgggaaagattaggaccacgccacatcagcctcatccatggagagggcctggatgatgttgttattacgggtaacaatgggaccatagatggccaaggcaggatttggtgggacctatggtggaatcgaacgttgaaccacacaagaggccatcttattgagctagtggactcaaccaacatcatgatctccaatatcactctacgcaactccccgttttggacagtgcatcccgtctactgcagaaacgtggtgataaggaacttaactgtactagctcccttgaatgctccaaacactgatggcattgatccagattcgagttcagaagtttgtattgaagactgttacattgagagtggagatgatctggttgctgtcaagagtggctgggatcagtacggcatctcggtagggaaaccaagctcaaacatcatcatccagagggtttcaggcacaactccaacatgctcaggtgtgggatttgggagcgagatgtccggtggaatatcaaatgtcatcattcgcgacctgcacgtatggaattccgcgcaagcggtgaggataaaaaccgatgtaggacgaggtggctacataaccaacatcaccatagagaatgtcaggatggagaaggtcaaggtgcctataagattcagccgaggtgcggatgatcattcagatgacaagtatgaccgaagtgcgctgccaaagatcagtgatgtgcgcatcagagacgttgtcggtgtggatttacagcgcgcaccgatgctggaggcagtgcacggtgcggtgtatgaagggatttgcttcagaaacgttagcttgacagtgataaagcgtcaggatagatggcattgcgagtctgtgtatggagaggcacatgatgttcttccagcgccatgtgaagagtttaggagaaatggctcgtcatcttggtgtggccattcttga</cdnaseq> |
| Protein Sequence |
<aaseq>MLPHATAHQPTPSPRPRLLPVAAAALLLASSYLALTRLPAAAPL AALVAPATARVDGDRDRDSCAGFYRGGSSGRRAASASVEEFGAVGDGVTSNTAAFRRA VAALEARAGGGGARLEVPPGRWVTGSFNLTSRFTLFLHHGAIILGSQDPEEWPLIAPL PSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTIDGQGRIWWDLWWNRTLNHTRGHL IELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNLTVLAPLNAPNTDGIDPDSSSE VCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCSGVGFGSEMSG GISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRMEKVKVPIRFSRGADDHS DDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGICFRNVSLTVIKRQDRW HCESVYGEAHDVLPAPCEEFRRNGSSSWCGHS</aaseq> |
| Gene Sequence |
<dnaseqindica>1..447#1830..1950#2177..2351#2458..2528#2808..3442#atgcttcctcacgccaccgcccatcagcccacgcccagcccgcgcccgcgcctcctccccgtcgccgccgccgccctcctcctcgcctcctcctacctcgccctcacccgcctccccgccgccgcgccgctcgccgccctcgtcgcccctgctactgcacgcgtcgacggggacagggacagggacagctgcgcggggttctaccgcggggggtcgtcggggcggcgcgcggcgtcggcgtcggtggaggagttcggggccgtgggggacggggtcacgtccaacacggcggcgttccggcgcgcggtggcggcgctggaggcgagggcgggaggcggcggcgcgaggctggaggtgccgccggggaggtgggtcacggggagctttaacctcaccagccgcttcacgctcttcctgcaccacggtgcaatcatcctcggctcccaggtgatccatcaattcatcttccctttttcgttttctttttcccttcgatttctttttttttctttattagtttatgatccatggcttctagcagttgcaacaagagttcgttgacttaagcatatatggaaatcaaatcctgattctgttcatccgattgtggataatcatgttgatatgcgaagtgaaattaatatttgcactggaaaaaaatctctaagtacagcattaggatatcagttactaggctggttcctgttcttgctggattgtatcatctgtactttgcattgtgaaacttggctcagcggttgtgtgttgtcacatctctcatctcacatgccaatggttcattgaaacatgagagagaggacatgggtgggttggaatcacatgcttggactgtctggtttcttgtggcttctgctaccactaccaggcagcctaccaaaatgttattctactctcatgtgcctttgctttgtccttactgctgcttggactgaccacaccctgattctgcttttgtactttgcttcttctgccgtctttatctgcttatgctaaaagatttgtagacaattctgcagtgcttgtttggagcttcctacaggaactaaatattccacatttttggtgcctataaattaattgtagagtggtgttcatgcaattggttgctactacttctaccttgtagtagtagggagtagaatttgctccatggattccctcgtatggcgtatgggggtacggagtgctgcattcatgtttgaggcagaaagttgttgggatagaggccataaattagtaacagtaattaagggctttaattagatgctatgcctttgacatgatgccacttgcactcacagcagaatcaccttaatattctaatacaatcatggccaggtgtccaattagtctttttggcaaaaaaaaaaaacaccattcaaatgcttgttgtagaaccaagaacaacttactgtgaaaagtgaaaactggtcagttggagtgagtgaaccaactgaaaattgcagcctagcattttacttcagtctaatgccagttcccgaaccatcgcgccatatagtttcttatgggaattgggtggaaccaaaggcaatcgaacgatcatcaatcgcacagaagacagatgcatgaataaaaaagtagtgtagatcgttctactcataatgataccaacatgaaagcaggaagaacaatcaatcttgacggggtagggggaccataccctagattcttgattaaattatttgtattggtatttaagaagaacagtctccagcacttcatagtgttgcatatgttgaatggaaatctgcatagcattgactggtgctttggactgtaatgtacaggatccggaagaatggcctctcatagccccattgccgtcgtatgggcgtgggcgggaaagattaggaccacgccacatcagcctcatccatggagagggcctggatgatgttgttattacgggtacagaagttgttttattagctatgtctatttcagttctgatcaattagcaaagttgtatgtgctgaattaagtcattataatgacaacataaacataattacataaaacattattatgtttagaggtatagcatatcatacatgtgaagaactagcgttgacttgtaacttgcatgtgcccccctttacatgttaggtaatcagttttcgaaaacacatgttaggtaacaatgggaccatagatggccaaggcaggatttggtgggacctatggtggaatcgaacgttgaaccacacaagaggccatcttattgagctagtggactcaaccaacatcatgatctccaatatcactctacgcaactccccgttttggacagtgcatcccgtctactgcaggtcagtttgttatgtttgtacagcgaataaacaattgcacttgccctcttgatattcattatattggaatcatataaagtgaacatgttgtttttttttctttcagaaacgtggtgataaggaacttaactgtactagctcccttgaatgctccaaacactgatggcattgatccaggtacatgctcctagagggtgttcctcttttacgcaatgttaattccaactctggaccatcattgattgctgtacttcatatgataaaagaagtggtcctatttgtttgctctttagaagctgacgtagttagatactgctttatcgccatttttagcactacaaatttgaattagaacatacttatgcttcaaactggtgataacttcattataaaacctcaaactgcgaagagcatgcatggctatccatgacattttccattgatgtataatggcagattcgagttcagaagtttgtattgaagactgttacattgagagtggagatgatctggttgctgtcaagagtggctgggatcagtacggcatctcggtagggaaaccaagctcaaacatcatcatccagagggtttcaggcacaactccaacatgctcaggtgtgggatttgggagcgagatgtccggtggaatatcaaatgtcatcattcgcgacctgcacgtatggaattccgcgcaagcggtgaggataaaaaccgatgtaggacgaggtggctacataaccaacatcaccatagagaatgtcaggatggagaaggtcaaggtgcctataagattcagccgaggtgcggatgatcattcagatgacaagtatgaccgaagtgcgctgccaaagatcagtgatgtgcgcatcagagacgttgtcggtgtggatttacagcgcgcaccgatgctggaggcagtgcacggtgcggtgtatgaagggatttgcttcagaaacgttagcttgacagtgataaagcgtcaggatagatggcattgcgagtctgtgtatggagaggcacatgatgttcttccagcgccatgtgaagagtttaggagaaatggctcgtcatcttggtgtggccattcttga</dnaseqindica> |
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