Os08g0109400
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os08g0109400 |
|---|---|
| Description |
AUX/IAA protein family protein |
| Version |
NM_001067346.1 GI:115474428 GeneID:4344471 |
| Length |
5360 bp |
| Definition |
Oryza sativa Japonica Group Os08g0109400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:467151..472510 |
| Sequence Coding Region |
470260..470507,471245..471546,471629..471749,471871..471940 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:467151..472510 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:467151..472510 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaagagctcttcagttgcaccaaggctgaaacaggagagacaagatgactgtaagtttcaggaaggtgatgtgaacagccttgagcttcggcttggcatatcttccgacaatgaccagatcagtggtggtggtgctgctagtccatggcttggtgtgggagtgcacccttggagcctggctgcaaggcaagggaaggcagccttggagcaagctcaccagaggcctaatgaatgtgctgtccaaagagaaaaccgcgcggcttcatcagctcagctggtgggatggccaccggtgcgcgcattccgcaagaacctgtccaccccaaaacctgcagatgcagatgacctgatgaacaaggtgaagctctgctctgatgagggccatggctccagatgtgcagcccaagagaggaggtcatcatcaaccatgtttgtgaaggtgaacctggagggctatgctgtcggaaggaagatcgacctgaaggcgcaccgcagctatgactctctgtcccaggctctgcagagcatgttccatggcttcttgtcagatggcattgcaactagagacaatgagctgcagcagatggaggagggcagcaagaagaggtatgttcttgtgtatgaggataatgagggagaccgcatgctcgtcggcgacgtcccatgggagctgttcattgcttcagtgaagaggctctacattgctcaggatcctagagttcatgcgaagctacgataa</cdnaseq> |
| Protein Sequence |
<aaseq>MKSSSVAPRLKQERQDDCKFQEGDVNSLELRLGISSDNDQISGG GAASPWLGVGVHPWSLAARQGKAALEQAHQRPNECAVQRENRAASSAQLVGWPPVRAF RKNLSTPKPADADDLMNKVKLCSDEGHGSRCAAQERRSSSTMFVKVNLEGYAVGRKID LKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEGSKKRYVLVYEDNEGDRMLV GDVPWELFIASVKRLYIAQDPRVHAKLR</aaseq> |
| Gene Sequence |
<dnaseqindica>3110..3357#4095..4396#4479..4599#4721..4790#gggtctctgggttctctgctccctaacagaaaagaaagaaagaaagaagctttcaccacaaaaacccaacccaccggtggacaagaggaattcgactattccagatagggcgacatggactgcgagatgaggcgactctagtgccagtcactccggtggcccattttttcttcctttttcaggggaaaaaaaggaaggaatttgggtagatcaatcaatggagcagagaaattcgatgtttgtttgtttgtttgttcaatagaggagagcaattcttggtcatgtatgcatcttgcccacagtggaaggagtgagtgtgatttggaagacgcaggtagagggtgtgccttccaggtgttcgatcatttgcctcaaagaatccatatcctcttttgtgctactgtccagatgatgttcaggtgatggtttcggatgccaacatgacttccttcttgtgtatgtcggaagagaagtgaggaacctgagttcttcttaccacctttaattgttcgacttgatcggcatgcaggaataataacagaaagaaaactccaagagtgctgacaagtgacaaccaggagatgcagacatgcagttcctcgatgaatgattcctgatgtccttgtacagttgtcctcagccatttggaacaatggggattctttgccggtatgctctatcatcaggaaggaacatttctgtgagaagagctgctacaagatatgtatgaggtatgaggtatctatctcctgccaattactccaagcttttccatgttccaataattgcttgtttctgcgttcctgcagttagttaaaagaaaaaaaaagatactagaaaccaaagctacagaagaagcaattagaggggcctaactcatcattgtgagcctgaacataatgcagtgttaaagataagtcaacaaagcttcttgtctgagtccacttatgttctgaaaatggcatggcatgcagatcagacaggacatattgctgcagcacctattaatctgcctactccttaagcactaagaaagaaatatatactaaagtgtttattccagttatttttaggtgggacaagatactcctgagtaaacaacccatcattactttgtgatacaattaggcaggccaatcatggagctaaatggaatagaacttgcttagggatagcttataggttttctctttgcaccttaatagatcttcacatccttgttaagagacgtgcctttaaatgattaaattaaggaagtacatgcaagtggtaaagcttttcgggaatacgcaaggagcgcattttttccattaagagaaataaaagttatttacatttgaaagagaaaaacagcacgggactgatacaggacaataacagacaatcctaggtctatctctcgcgcaagtggtaaagctgataggtgaaaagatgagtgtctttctaataaagcttctcaccttacatgtaaagaacagatactaaatattatgttaacatggaacgtaaggagctgtcattgtacaaagaggatcaacagcaaagtaatatttcttttctagtatataataaagtttgtacaatccaatagattcttaggagctattttttcttcaagtgaggattttgatgcatatatgtaggcatcatggaatcatatgccttgcttccacattaacttaagagcagtctgaataagcataggtcatccaacttgtcaggtttaatcgattttggttagaaaagcaaagattatctgtactaatgcagagggaccaaatggccatcttgagttactttaccaaggtctcatgtgggcagaaaaggcaaaggtacatttggtttagtgaaaagcactgatgttgtggacctcaataaaactctaatattcttttactaagtttatttcttcttgtttgaaacttaacaatttttcctcagcttatggtaaaatgggcaatgatgagaaatgtgctctccagtgtgtcaccacaagcactaagacactatctaatggttggaaaacgtcacaggtaaaatctaactctttcttctctgaatcagaacaataacttgcttgactaatacgctgataataattcaaaaatagcttggtgagtatgatatgttaaggactagtgcatgcttcgtttgcagtcagataaccacttagtacatggtaacatcaacgtctatgtcaatacctaccgtaactcggtagctgaaagaattaccatctaattttaagattttttatttctggtgggagtacatgcagcactataaatcactaaattttaattggcaggaaccatagaagaagatcccaggttcatcataatagaagctggtacatgtttcatggaccacatttaaactggaaacacacagctcctaagtttttagtctcagtatctccttttaaattttgcatgatgcaagagggcatcttgagaaatatgttcaagttcagcataactgttacccaaaagtgatctgccaattttctgcagaacaaagaaagcagagcaggggagcatgcttactttcaggaaaagattgaagtggactgaagtttcaactggagctccaatagacaccacattccccaccaagacacaaggtcagacaaaaccacacagaaaatcttgcaaacgacaagacattgccatccacatgtccacttgtatcttgttgattttggtgctcttatactcttcagagtataattttatcaaactagtagacgctgtaacacattcatacttcaaaactttttactgttcctcaacttaattccacacatttcaaatttacatggattcagtgtgattctgattttttttcaccaatatgtgtagatcaaattttgcacttttacaggcctatcattatttcatacttttagttagaccccactggtgcactttagtactcaccaaaggtctccccacaaagacacctgcctttctcatcatctgcctcctcagttccctttaattattcccttgcaactacctcaacaccataaagacctacaaagcccttctctcacacactctcacacaattgctacatacaaacactacagtttgggagaagagaatccatgaagagctcttcagttgcaccaaggctgaaacaggagagacaagatgactgtaagtttcaggaaggtgatgtgaacagccttgagcttcggcttggcatatcttccgacaatgaccagatcagtggtggtggtgctgctagtccatggcttggtgtgggagtgcacccttggagcctggctgcaaggcaagggaaggcagccttggagcaagctcaccagaggcctaatgaatgtgctgtccaaaggtttggttaccacttacaatctaatagctttttcctagaaatttctgccatgaaaacattgtgttgaattaggttgagatgaaatctactcattgttctgaaaatacaacacaaccttcatatctcttttgaatgtaagagattgctctggttcagtcaggggtatatttaagttgctccttgttttgatgtgatcacaacttgttctgggagatcataaaaacgcatgacagcaaacaagagaacaaaatactgcctgaatgttcaaagacagaattcgcgcgtaaagggaggagaaggagaaaaaaagttaaacagaaatataaaagggaagcacaaagatgatctttattttttaaaaaaagaaaataaaaggaaaaagaaacagaaaggaagcagaaggggccattagagccatcatcatgcagaagtaagaacctccataactttaaaggtggatggagaaaatgaccttcccattagtttcagcctgcagagttgctgtcatgaaattctcatccattatctaaaagattgaaattctcatcagtatggaatctttgcagttagggaggaacaataacaaatggttcatggtagcacctatcatgtatcaaagtttatttcttgtttgctaccatgaacaatttacttaatttatttactatcaatgtttccaaaaaggtttagcctcatcatctcaccaaatttactttatttactaacaaaatgttcagagaaaaccgcgcggcttcatcagctcagctggtgggatggccaccggtgcgcgcattccgcaagaacctgtccaccccaaaacctgcagatgcagatgacctgatgaacaaggtgaagctctgctctgatgagggccatggctccagatgtgcagcccaagagaggaggtcatcatcaaccatgtttgtgaaggtgaacctggagggctatgctgtcggaaggaagatcgacctgaaggcgcaccgcagctatgactctctgtcccaggctctgcagagcatgttccatggcttcttgtcaggtcaagacctttgagtgctggattgggagtgagctccatagtatttcttgctcaggtgactgatcttgatgcttggtttcagatggcattgcaactagagacaatgagctgcagcagatggaggagggcagcaagaagaggtatgttcttgtgtatgaggataatgagggagaccgcatgctcgtcggcgacgtcccatgggagtacgtttgtttgctttgagaaacctctcatttctgacatttttttccttttatccaacgaagaagatgacatgaagagctgaaaactgattgatcgatcttgcaaattttatatatgcaggctgttcattgcttcagtgaagaggctctacattgctcaggatcctagagttcatgcgaagctacgataatagcaatggtgtgtacccaggaatgagccacacctccactgcaagaacatgcagttaaatagttaatatgtttggagcagaacatgtactaataggacacaaaaattaactgcttgtttttgcagttgcaagctgatcctgaaagcctggaccgcaaccgaggatgagaaagatcgattgctgcttttatcatgagcagatgcaaggaaatatatatatggcataggatgacaggagcatcatattcaaagagacgaagcagcaatatgtgctagtgtttagctgacatgctgtccctgttcgcttaattagtagaatgattaaatttgccttggttgtgcttgagggagctagtgctcatactagactatactaattccctaaaaaaaaacaacaaaaaaagtagacttctagtgcggttaatgtagaaagttttggttgtgtatatattttttgacctgttgtactataattgaactgatggtgcattagctagtgcttgttaattagcttgtactatgtgtgtgggtggatgtaaatgacactgggtgcaataaactagtcttgggt</dnaseqindica> 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