Os08g0207500

From RiceWiki
Revision as of 20:46, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0207500

Description

Similar to Zinc transporter ZIP1 (Fragment)

Version

NM_001067780.1 GI:115475296 GeneID:4344937

Length

3082 bp

Definition

Oryza sativa Japonica Group Os08g0207500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:6266828..6269909

Sequence Coding Region

6266862..6267596,6268123..6268272,6269107..6269412

Expression

GEO Profiles:Os08g0207500

Genome Context

<gbrowseImage1> name=NC_008401:6266828..6269909 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:6266828..6269909 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgccatgaggcagagcacgccgcgggccatgctgctcctgtgcgccgtgctgatgctggccgtggcgccgccgggcgcggcgacggcggcggcggtggccgggtgcgagtgcggtaatgcggcggcggcggcggtggcgggggaggacgcgcgcggggcgttgcggctcaagctcgtcgccatcgcgtccatcctggcggcgggcgcggcgggggtgctggtgcccgtgctggggaggtcgttcgccgcgctccggcccgacggcgacgtgttcttcgccgtcaaggcgttcgcggcgggcgtcatcctcgccaccggcatggtgcacatcctccccgccgcgttcgacgcgctcgcttcgccgtgcggcggaggcaggggcggcggaggcgggttcccgttcgccgggctcgtcgccatggccgcggccatggccaccatgatgatcgactccgtcgccgccgggtactaccgccggtcccacttcaagaagccgcgccccgtcgacgaccccgccgacgccgcgcgcgccgccggggtcgaggagggcggcgccgagcacgccggccacgtccacgtgcacacgcacgccacgcacggccacgcccatggccacgtgcactcgcacggccacggccacggccacagccacggcagcgcgccggcggccgccacctcgccggaggatgcctccgtcgccgaaacaatccggcacagggttgtctcccaggttctggagctgggaatcctggtgcactcggtgatcatcggggtttcgctaggcgcatcactgaggccgtcgtcaatcaggccactcgtcggagccctcagcttccaccagttctttgaaggcattggccttggtggctgcattgttcaggcaaattttaaggcgaaagcaacagtgatcatggcgactttcttctccctcactgctccggtgggcattgcactggggatcgcaatctcatccagctatagcaagcacagctcgaccgcacttgtcgtcgagggagtcttcaactctgctgcagcagggatactgatctacatgtccctggtcgatctcctcgctgcagatttcaacaatccgaagcttcaaacaaacacaaagcttcagctggcagtatacctcgccctcttcctcggcgctgggatgatgtctctgcttgccatatgggcatga</cdnaseq>

Protein Sequence

<aaseq>MDAMRQSTPRAMLLLCAVLMLAVAPPGAATAAAVAGCECGNAAA AAVAGEDARGALRLKLVAIASILAAGAAGVLVPVLGRSFAALRPDGDVFFAVKAFAAG VILATGMVHILPAAFDALASPCGGGRGGGGGFPFAGLVAMAAAMATMMIDSVAAGYYR RSHFKKPRPVDDPADAARAAGVEEGGAEHAGHVHVHTHATHGHAHGHVHSHGHGHGHS HGSAPAAATSPEDASVAETIRHRVVSQVLELGILVHSVIIGVSLGASLRPSSIRPLVG ALSFHQFFEGIGLGGCIVQANFKAKATVIMATFFSLTAPVGIALGIAISSSYSKHSST ALVVEGVFNSAAAGILIYMSLVDLLAADFNNPKLQTNTKLQLAVYLALFLGAGMMSLL AIWA</aaseq>

Gene Sequence

<dnaseqindica>35..769#1296..1445#2280..2585#cccctcctccccacacgccacccgcacgcgcgccatggacgccatgaggcagagcacgccgcgggccatgctgctcctgtgcgccgtgctgatgctggccgtggcgccgccgggcgcggcgacggcggcggcggtggccgggtgcgagtgcggtaatgcggcggcggcggcggtggcgggggaggacgcgcgcggggcgttgcggctcaagctcgtcgccatcgcgtccatcctggcggcgggcgcggcgggggtgctggtgcccgtgctggggaggtcgttcgccgcgctccggcccgacggcgacgtgttcttcgccgtcaaggcgttcgcggcgggcgtcatcctcgccaccggcatggtgcacatcctccccgccgcgttcgacgcgctcgcttcgccgtgcggcggaggcaggggcggcggaggcgggttcccgttcgccgggctcgtcgccatggccgcggccatggccaccatgatgatcgactccgtcgccgccgggtactaccgccggtcccacttcaagaagccgcgccccgtcgacgaccccgccgacgccgcgcgcgccgccggggtcgaggagggcggcgccgagcacgccggccacgtccacgtgcacacgcacgccacgcacggccacgcccatggccacgtgcactcgcacggccacggccacggccacagccacggcagcgcgccggcggccgccacctcgccggaggatgcctccgtcgccgaaacaatccggcacagggttgtctcccaggtgagctcatcaccaaccgtcaagctcaatctcgttacgcacatcacaaaacaaaatacagtaaaaatcaaaaataaaaaatttgggcggttcaaatgaaagttccaatttgggatactttataaagatgactggtactagtgtactaccaattgctttactttgccaccatccatttcaaatgtccctctcctttatgcaacaatcacaagggaacatagatagagatgcatagtggtattctacactacacaaattagctgattttgatgggagaaaggcatgtctctttctcttttgtaagagataattcaaatactgacaagaagatcaatcctttgtattgtaactatctgaggtgtctgcccactctgcaattggggataaatcttctctgctcagcctcacaactgaaccccctttgcagattctgcacccaacattgcaaatgttgtaatgtctgaatgaaccaagctttggtgctacttttcgaagaataactgacaaaagaattgtgattgtgcaggttctggagctgggaatcctggtgcactcggtgatcatcggggtttcgctaggcgcatcactgaggccgtcgtcaatcaggccactcgtcggagccctcagcttccaccagttctttgaaggcattggccttggtggctgcattgttcaggtatatcacaataacattttacagccatgattaacatgaacatctcacattacattcataccgcggtataagataatcgacaattcgacatagaagggttgaaactatagctgtgcgcttgtttacctacattgttacatggcaaattgataaaatatctacacgtgaaaatcaggtaaaaggcacctgggctcatgacagaaacagaagggcatgctccattagcaaaagcgtgcgaaaaacgacatatagagtatagacagagatatttatagctcaaatgatagaacttatcactagctacacgactatactgtacaaagcaaacttgaagtaggaccatcaataattgattccgttccactatggttcagaaatccttcactaactgacaagctcaaacaagctcccagcttctcaatgccagttttttttttcaggatacacaaacaggaattgctgcgtcattttttgcccttctgttttcccagatgcttttaaaactggacttcagatttagcatatacctaaaaataccgcgttttcagaaatgggttgagactggtttgtcatgtaacactggccaggattctcaaccattttcaattgttatcagtatactgtatccactatccagtgctgatcaatatccacgcagatattactatgtctgagaagaaccacaatttcagcagtttactttagttcattcaattaggtgaaaatccattccaccataagctactttccataaaaatgaaaaagggacagactttaaagtttctcgtatgagacaataatttgacatactttgtgtcacattttcttacacaggcaaattttaaggcgaaagcaacagtgatcatggcgactttcttctccctcactgctccggtgggcattgcactggggatcgcaatctcatccagctatagcaagcacagctcgaccgcacttgtcgtcgagggagtcttcaactctgctgcagcagggatactgatctacatgtccctggtcgatctcctcgctgcagatttcaacaatccgaagcttcaaacaaacacaaagcttcagctggcagtatacctcgccctcttcctcggcgctgggatgatgtctctgcttgccatatgggcatgagatcttcagagcaaccaagagctgcaaatttttgaatattgtctctgaaaaagacaccctgagcttagtttgtagctgacagggtttgatgttgtcatagcattactgcaaccagcttttgtagaatctccatcaaccagaattggagaaaaagatggcctgaatacgaccgaaagtttagagtttactgacatgagtacacaagtcaaaagttcaggacaaatctgattcttgggcaaatggtgtgcttccaccagtatagcaccaaatgaagtgaacaagaatcaaatgggttagtcgaggtagtggtccttgaacagattttctcttcaagtccaaaagctttgtataaaaatgatgacctccttttggagtcaatgtcaatgtacagattctcagctagggtaaatcctttttgtatgacaagagctctgtgaagtttgttcacttgttcagtgaagaatcaaataatccccagcgttgtctcctttttctct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0207500, RefSeq:Os08g0207500