Os08g0343300
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os08g0343300 |
|---|---|
| Description |
Transcription factor TFIIE, alpha subunit family protein |
| Version |
NM_001068129.1 GI:115475995 GeneID:4345330 |
| Length |
7555 bp |
| Definition |
Oryza sativa Japonica Group Os08g0343300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:15582293..15589847 |
| Sequence Coding Region |
15582449..15582474,15582616..15582738,15583524..15583644,15583819..15583947,15585201..15585310 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:15582293..15589847 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:15582293..15589847 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggctccatggagccgttcaaccggctggtgaggctggcggcgcgcgccttctacgacgacatctcgatgaagggcgacaaccagcccaagacctcccgcggggacaaccgggggatggctgtcgtcgtcctcgacgcgctcaccagacgccaatgggttcgagaggaggatttggctaaggcattgaaactccactcaaagcaattgcgccgtatcctccgattctttgaagaagagaaactagtgacacgagatcaccggaaggagtcagcaaaaggagcaaaaatatacagtgcagcagctgcagctgctggtgatggtcaatcaattaccaaggagggagaagagaaagtaaagatgcatacccactcgtactgttgcttggactatgcacagatctgtgatgttgtaaggtatcggatacatcgcatgaagaaaaagttgaaagatgaattggacagcagaaatacaatccaacactatatatgccctaactgtaagaaaaggtattcagccttcgatgcattacagcttataagctacaccgatgagtacttccattgcgaaaattgcaatggtgagctagttgcagagagtgacaagcttgcttctgaggaaatgggagatggtgatgataatgcaagaaaacgccggcgtgagaaactaaaggatatgcagcaaaggatcgatgaacaattgaagccattgcaagcacaacttaatagggtgaaggatcttcctgctcctgagtttgggagcttacaatcatgggaaagagctaacattggtgcttttggaactgctgaccctagtgctgctgactcgtctaggaacccacaagggcagtatggtacaccaatgccatacctcggagagacaaaggttgaagttgcattgtctggcaccggtgtaaaagatgaaggtgctgaatcaggtacaaatggtaacgggctgaaagtcttgcctccatggatgatcaaacaaggtatgaatcttacaaaagaacaaagaggagagaccagtaactcatcaaatctagatgaaaaatcagaagtcaaggatgagaaaaaacaggactcaaaagaagatgagaagagtatacaggatgaatacataaaggcttattatgaggccttaaggaaaagacaggacgaagaagaagcgaaaaggaagatacagcaggaaggggatacatttgcttctgcgtctcattctgaacggcaggtgggcatgaaatccaaacgagaggatgatgatgagggtgttgaatgggaagaagagcaacctgcagggaatacagctgagacatacaaactggcagatttgaatgttgaagcccaagaatctggtgatgaagaagatgaaattgactgggaagagggttaa</cdnaseq> |
| Protein Sequence |
<aaseq>MGSMEPFNRLVRLAARAFYDDISMKGDNQPKTSRGDNRGMAVVV LDALTRRQWVREEDLAKALKLHSKQLRRILRFFEEEKLVTRDHRKESAKGAKIYSAAA AAAGDGQSITKEGEEKVKMHTHSYCCLDYAQICDVVRYRIHRMKKKLKDELDSRNTIQ HYICPNCKKRYSAFDALQLISYTDEYFHCENCNGELVAESDKLASEEMGDGDDNARKR RREKLKDMQQRIDEQLKPLQAQLNRVKDLPAPEFGSLQSWERANIGAFGTADPSAADS SRNPQGQYGTPMPYLGETKVEVALSGTGVKDEGAESGTNGNGLKVLPPWMIKQGMNLT KEQRGETSNSSNLDEKSEVKDEKKQDSKEDEKSIQDEYIKAYYEALRKRQDEEEAKRK IQQEGDTFASASHSERQVGMKSKREDDDEGVEWEEEQPAGNTAETYKLADLNVEAQES GDEEDEIDWEEG</aaseq> |
| Gene Sequence |
<dnaseqindica>157..182#324..446#1232..1352#1527..1655#2909..3018#3094..3277#4110..4301#5145..5366#5456..5642#6964..7058#cttccctttcctcccccccctccgatccaaccgccggcggcggcggcggcgaccggcggccagagcgagctccgtcccgatccggcggggaggggcctccccgcccccacgcgctaacctccccaggcggcctcctcctcctcctcctccgcagcgatgggctccatggagccgttcaaccggtgagtcccccctccgtttcgcacgggccctggaaactctaaccctagcgggtggggggtgatgagatgtgcccccaccctcgcctgcttttcgtcgctgacctcggccgatcgtgcccgctgatgatgatgatgatgcaggctggtgaggctggcggcgcgcgccttctacgacgacatctcgatgaagggcgacaaccagcccaagacctcccgcggggacaaccgggggatggctgtcgtcgtcctcgacgcgctcaccaggtgattgggtctgcttcctgaagattctgtggggggagaatttctgtgttcgcgaattcgtatacctaggtctgggttgaaggcgggggttttcctctgttggtaggatcgtgaggggcgagtggagttagtagaacacagttcatttgggtccatccggaaatgaattgataaattggatacttctaatgagcacacttagatgatattgttgctgctgcttagggacatctcgatggatgaaaatggtggaggtgtttgcatgaaccagaattcccccaattggactgttgtagttaaatttaacagtgatgtgccacagcaattttatttgagttttgactctttcttcctttgactggttttatatgttttttttaaaaaattggaggttaaagatgataacaattgttaaggaattctgtactcaggaactgcaaatttactaatggatcaaggataaaatcctagatgtcctcttttcttggttgttaagacatgtagattggagccaacgaatgaaatgtctaaatccttataaaacattctttcttaagaagtttttatccacaaatctttggacctcagcacttcagctacatcatgtttgatggattgttaattttatttattagtcctcatgttttccatccacttatttgtgccttcttttccatacacattgatactatcaactgatgccttttatgcaaattacattgtcttggtataaaatggtttttggctctgaagttatgcaaaagctaatatttttccaccaccagacgccaatgggttcgagaggaggatttggctaaggcattgaaactccactcaaagcaattgcgccgtatcctccgattctttgaagaagagaaactagtgacacgagatcaccggaaggaggttagttttttattgcggctattattattgaagttccactatatctccattgtctttttcgttttctagggatggacatgttttaactgacatctcctgcgacccaatgaaaaatatttttgttgtggttcattttccttttctaattttaatttttttactttgttgctgcagtcagcaaaaggagcaaaaatatacagtgcagcagctgcagctgctggtgatggtcaatcaattaccaaggagggagaagagaaagtaaagatgcatacccactcgtactgttgcttggactatgcacaggtagttatccactggttttatctagatgtttttcatgataaataccattcagattgaaggcattccctccacaatatagggccagtaaattgttcttttccttttctagaatgttttaataaggacgagtttagtgtagatgccagggagtgggatactgttatttcaggatacccatgcaaagtgttgaaaagttagtgtggtttagcatattttacctatgggggttgaatactgtttaatgttcaatcacttattccgagtcaaggtgtgtgaacattgtggataataaattttctttagattttttacatttagatagattttttacatttagatattgcttgcatgtactagaaaatcagtgtttcatcatcagggttcatatgcaaatacagtttcttcgtgtgtaatctggctgtagtaactcctataaatgtcattctctcataatcatagattcatttattcgaatttttggtgtagttgctacaatttgaatccacgccattaggaacctaataagttgcataatactccctctgttccatcttgtaaggtgttttagttttctcctaagtcaaacttctctaactaacatttataataccaaataaacactatcaaggcatattttatggtggatgtagtgaaactaatatgatgttgtagatggtagtgcgtttttctataaacttggtcaaagctagagaagtttgacttaggacaaaacggcaatatggaatagacaatggagtactctaagaaacagtacaattgtagataaccaaggcctacttggttcatgtggtgattatattcatttctacttgtttctagagacacaaaaccaaacataagaaacatgtgctaacaaaaactatttttgtggattgtttagatcaattgtgcatcataaatttcggttgaatggcaatttatgaactagtttgtataaacaatataacataacataacatacaagttaaccttgtcatacatgtccattaaattgactttaccacacttttttgtgcatgctgctaatggcatttacaatattactaagtttgtagtttttgtttacttctatgttgcaagtatttgagttattttattgtttgaagtaatgaaggtctttgatctgttgaggactacaactacaaaacctaatcattctcattcatctttcatcttattctgtcatcatatttgaatcgtgtttgataagatgcattttttttgaaacacagatctgtgatgttgtaaggtatcggatacatcgcatgaagaaaaagttgaaagatgaattggacagcagaaatacaatccaacactatatatgccctaactgtaagaaaaggtactaggtacaattatagttcttttgatgctaggcacaaaatcaagttacttaaccttgttttacaatatgcaggtattcagccttcgatgcattacagcttataagctacaccgatgagtacttccattgcgaaaattgcaatggtgagctagttgcagagagtgacaagcttgcttctgaggaaatgggagatggtgatgataatgcaagaaaacgccggcgtgagaaactaaaggatatgcagcaaaggatcgatgtaattatatttttattttacaatgctaagaacattttcttgtgagcattcaattttaagcacttttaatgcaacttatatatataatggttcaactagtgcagaataagacaaaatgtttttgatttacaatctgcaatcatactgttggttaggccatgattccatgctttttttttggcacaacaggaaatatagtaagttatctgcttgtggtctttctggatgctgttgaaattattctttttgtttcttcattacgagtttttgcttggagaaaattacttgcatgcattagtatgctagatgttcatcagacatgaataggtgaccatgttagtaacacttatatgtacatcccattatgggacagtttacatcgtgagttctacttcagagttgttaatgctttgctataaactacagaaattaaatatacattagtttcaactttaacagataccatgatatatttccacagtaccatctaaacactgttgcttcactggtttgcttatacaacttatgattgtagatgtgtctacaatctgcttaaagttcaatataaaaatctcttgctgtttcagtctattcaacaaatactttaatgcggtagacaaccagttcttttggatgagaaatttagtattgtgatcttttggattaaaacgatgtgccctttttttagtgaagagtcttttcttttttgctgataatgagtagtagtctgtcaatatttttgtactaatttggaaatttatgtttgttagtcttgatctactggagtttggtgttatttattttttttacaacttcgttatatttggttcaggaacaattgaagccattgcaagcacaacttaatagggtgaaggatcttcctgctcctgagtttgggagcttacaatcatgggaaagagctaacattggtgcttttggaactgctgaccctagtgctgctgactcgtctaggaacccacaagggcagtatggtacaccaatgccatacctcggagagacaaaggtaagattatttttataatagtagtttttagtattgtttgattttttattagtacgcaatcaacaatggcgcgtcttgaagcttcctgagattgtaggtgggtccaacatgtcaggtgatggtggatctaacgggcaagactaagggaacatatcctatgcacacaagtttcccgtgcacacatatctacaaagtctcatattcaaattcattatattttagccgtaacaaaaaaagtgaaaaatctgacagttttaagggtaaaaatctgtcagaattgtcttttttattacggctaaaatataatgaatttgaagataaaatttcacatgtaggtgtaatactattcgaaatatgtgtacaattttttgtagaatttttcgtgacatttgctagttcgtgtgcactgagtgtgcacggagtgtgcacgagaagcttgtgtgcataggatatgttccccaagactaaaacctgtagttttgtgataacggaaacacgaaatctgtattttgtgagacaagttcgtaaatctgtaattttgtgatagattgtgcgaagtacctgtagtttagtgaaatttactaaaaagaactctgaatcaaatctaacatagtttcttctcgaattttagcaaggattgttgttttctttaagaaaagtattactgatcttctgtaaaataatgcgatgtgtttatttgttaatccttactaatgcatgtgtgtttaatatgtgcttacacatgaacgtctcctgtcttgtatagatgatactcggtacattttcatacattttcaatcatgccttgatctaatcatgctttttacttatttttcttttcaggttgaagttgcattgtctggcaccggtgtaaaagatgaaggtgctgaatcaggtacaaatggtaacgggctgaaagtcttgcctccatggatgatcaaacaaggtatgaatcttacaaaagaacaaagaggagagaccagtaactcatcaaatctagatgaaaaatcagaagtcaaggatgagaaaaaacaggactcaaaagaagatgagaagagtatacaggtcagtttgggaatgaacataaaatctgattttacttttaagatttattttctgttcagagatacttatgttattcttttattgtgtaggatgaatacataaaggcttattatgaggccttaaggaaaagacaggacgaagaagaagcgaaaaggaagatacagcaggaaggggatacatttgcttctgcgtctcattctgaacggcaggtgggcatgaaatccaaacgagaggatgatgatgagggtgttgaatgggaagaagagcaacctgcaggtaaatttatgattgtaacaacagtaaattgatcttttaggcaatgtatcatatgcacacagtcatcttggtgtactcatgcactcaatccagaccctccaatctctatccaaaggataagaatgaagagtggtactttttcacaaaaccgcccacaccaccctagtaagtttgcatataacccctagttttattctctcctcttccgtctatgtccaggttcaggcttctcctttctatctttctttcttcccaaatctgtctttgaaacggtgaaacctcctccttcctcttcgcccctcttagtgcggcaccgacggcatctcaaatacagcccacgctctttgatccttctgtttccctttgtccatgttcttctctttctcgtcctaacattaagttaatcctaatcctacaaattaatttctatctctctcacagcagtggaatcagtcgcggcattgccattgcctcttagtttgtagctagctatatatggcacatacgagagaggccgatccgttgatgccacggtgccattcttcgactaatacttatagtcttccatatagcaaaaagcaagcccgtgattagcagcattgtctccctttcttttgggtttgagaggtgattgaagcatctttcctattaattgaatgcaacagctttagtttggcttggtcaagcgtgtacttgcttagaggatttgaatcgttgtggaagccacacgaagcgggaggagacaacgcagatagatctgggaagaagctttggacctggacatgaaaagagagaaaagaacaaaggggttatgtgcaaacttaccagagtggagcgtgcggttttgtgaaaaaacaccacttttcgttcttatccttaggattgaaattgaagggtccagattgagtgagtgcatgagtttactaggatgactgtgcacataggatacgttgccttggatcttaattctatgtttatcaaagctgcaacattgaactgacttaatatttctgactattcacttattcgctgatataatagattaatagccatatcatgactcatcttagtaagactgccataatttcttgcaatgttgatgtgttaacacaattttatatatgcatgtgttgggtgggtgggtttggggcatcctatccatatggcctttcatcttggcatatgcttttggaatatttcgatggaagttcatacgctacatatttcttatccttgatgtgtctgcttttgattatatgctttagacatttgaagatgtccttttatcaagtattatgtctaattttttgaactaatgcagggaatacagctgagacatacaaactggcagatttgaatgttgaagcccaagaatctggtgatgaagaagatgaaattgactgggaagagggttaaaaggcagtcacaaattcgttaaagtagttcaatttcattccaggaattggatgatgagcaatatcaccaactgaacaagaagccaagaaaaaggcatgaaaagcattgccaccaaagaattagtttgtatggtttgtttgaccaagggaacttttcggaagtgaagcgttttccttttaatagcgaaaacatttcccaaccccaggcggcattttctccccaagatccttaaaaagctaccatactgtaaagtattatgctattgacatcttcaagggccatgtgggtggaatttattgtcgcaaaatcagctctgttttcagtgaatgatcttttttttttttatgttgtgagactgtacgctatggccataaacatgccatttttcagatgttcttgccatgacctgtatattatgatggctatgcgctagattaaatttctgagattaatgaattgatttactccaagattaataatatcaatggtagtttgcc</dnaseqindica> 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