Os08g0427500
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os08g0427500 |
|---|---|
| Description |
DNA repair protein Rad4 family protein |
| Version |
NM_001068378.1 GI:115476493 GeneID:4345619 |
| Length |
7175 bp |
| Definition |
Oryza sativa Japonica Group Os08g0427500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:20647030..20654204 |
| Sequence Coding Region |
20647272..20647335,20647460..20647563,20648023..20648313,20648630..20648722,20648887..20648982 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:20647030..20654204 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:20647030..20654204 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgcggaccaggagccagcgcgacggccaccacgccgccgccgctgccgaaaccccgccttccggggcaagcggaggatcaggaggggacgttgcgaggggcggtggcacgcctcgccgtcgccggagggcttcgccggccgcggagaaagggaagtcgcccgccaaggtggaaatggaatcggcattggaggataaaagtaaaaacgttaaggtccatgcagagggttatgacgatgccgggatgacgaggttcggtagggatggctctgaaaagaacagtttggaggaagaagatccagatgcagctgatatggactgggaagaagggattgttttcgcggcggaacacgatgagtgttattcccatgagcttggagagacagtcaccgttgagttcactgatctaccctcttccactgaaaagaagactgctcggaggcttactgctgaagaaaaggagttggctgaactcgtgcacagggtccatttgctttgcctactagcaaggggtagggtaattgacaaggcttgcaatgatcctctgattcaggcttcaattctctctgttttaccacaacatgtactacggaattctgtagacactccaattctgaaagctaatgaactgcgtagtcttgtgagctggttccacaacactttcagtgtaattgcacaatccgacgacaaggggtcttttaaatcaaatttggcatttgctcttcaaagttatgtaggcactgctgaagaggtttgtgcactttcagtggcattgtttagggctctcaacttaacagctaggtttgttgcgaatctggatgttgctggtctcaagcctgacactaaatcaatggggacatcaaatcaggatgaacctaggctttgtacaaaggcgctgccatctagttcttttgttgcaggccataatgagtataataacctttcacctgtcctgtcacaaaacaatactgaaggtagcatcaatacaactccaaaacaagtcaaagttcaaggctgcaggaaaagtttgtctaaaaaattgtcgaagtgcaaggcaaatcagagagatagctctgcatcactatcaaaagatagctcatccagcagccaatatccttccacctccagtaatgctgaagtaccaagacgaaaaggggatttggaatttgagttgcagctggaaatggctcttttagcatctgcagctaaaagtcaagacaacaagctagcaactcaattaaatcagtcaactgatagcttactaagttcaactccaccattgaagaagttacgaaaaagtgaagaagcctcaagcaactcgagcgtggtttggtcgaggaatagagcaccgttattttgggctgaggtattttgtggtggcgaggcatcgtctggaagatgggtccatgttgatgttgcaaatgatattattgatggtgaacaaaaagtagaagctgcttccgctgtttgcaggaagcctttgagatatgttgttgcctttgctggaaatggtgctaaagatgtgaccagaaggtattgcctgcaatggcacagaattgttcaggggagagtgaatcctgagtggtggaaaagtgttttggcacccctagagcgtcttgaattggcagcaacgaacaacactgaagaaatggaacttcagaccagggccttaacagagcctcttcctaccaatcaacaggcctacaaagaccatcatctatatgcccttgagaagtggcttcacaagaaccaagttcttcaccccaaaggcccagtgcttggcttctgtaaagggaatcctgtttatcctagatcttgtgttcagacactgcaatcaagacatggatggttgcgggagggtctgcaagtcagagaaaatgagttgcctgcaaaggtcgtgacgcggccaaagaggactttcaattctcagtcaattcaatctaatagtaatagtaatgaagatgggcttaagccaaccatggaactatatggtaaatggcagctggaaccgctgcaacttccccatgcagtaaatggtattgtaccaaagaatgagcgtggtcaagtcgatgtgtggtcagagaaatgtcttccgcctggtactgtacacctgaggttaccaagaatattccaggtcgcaaagagacttggaattgattttgccccagccatggttggatttgattatcgaaacacccggtgccttccagtttttgatggaattgttgtctgttccgaattcaaaaatactatcttagaggcatatgcagaacaagaggaacggagacaagccgaggagaggaagcaggaggaagctcaggctcttattaggtggtatcagctgctgtgttccgtcgtaaccacacagcggttgaaggactcttacaaagcaccctcatcagagcacggaccagaaggaccatcccaagatgttagtcagcagaagggcacacgcaaaagtcgaagctcggaaacgaagactcgctcaagcagactacaggcggaccgaccatttgattctccttttcctgtccatgaccatgagcatgagtatccagaggaagatcagagcttcgacgaagagacgtttgtgaggacgaaacgctgtccatgtggtttttcaatccaagttgaggaattgtag</cdnaseq> |
| Protein Sequence |
<aaseq>MRTRSQRDGHHAAAAAETPPSGASGGSGGDVARGGGTPRRRRRA SPAAEKGKSPAKVEMESALEDKSKNVKVHAEGYDDAGMTRFGRDGSEKNSLEEEDPDA ADMDWEEGIVFAAEHDECYSHELGETVTVEFTDLPSSTEKKTARRLTAEEKELAELVH RVHLLCLLARGRVIDKACNDPLIQASILSVLPQHVLRNSVDTPILKANELRSLVSWFH NTFSVIAQSDDKGSFKSNLAFALQSYVGTAEEVCALSVALFRALNLTARFVANLDVAG LKPDTKSMGTSNQDEPRLCTKALPSSSFVAGHNEYNNLSPVLSQNNTEGSINTTPKQV KVQGCRKSLSKKLSKCKANQRDSSASLSKDSSSSSQYPSTSSNAEVPRRKGDLEFELQ LEMALLASAAKSQDNKLATQLNQSTDSLLSSTPPLKKLRKSEEASSNSSVVWSRNRAP LFWAEVFCGGEASSGRWVHVDVANDIIDGEQKVEAASAVCRKPLRYVVAFAGNGAKDV TRRYCLQWHRIVQGRVNPEWWKSVLAPLERLELAATNNTEEMELQTRALTEPLPTNQQ AYKDHHLYALEKWLHKNQVLHPKGPVLGFCKGNPVYPRSCVQTLQSRHGWLREGLQVR ENELPAKVVTRPKRTFNSQSIQSNSNSNEDGLKPTMELYGKWQLEPLQLPHAVNGIVP KNERGQVDVWSEKCLPPGTVHLRLPRIFQVAKRLGIDFAPAMVGFDYRNTRCLPVFDG IVVCSEFKNTILEAYAEQEERRQAEERKQEEAQALIRWYQLLCSVVTTQRLKDSYKAP SSEHGPEGPSQDVSQQKGTRKSRSSETKTRSSRLQADRPFDSPFPVHDHEHEYPEEDQ SFDEETFVRTKRCPCGFSIQVEEL</aaseq> |
| Gene Sequence |
<dnaseqindica>243..306#431..534#994..1284#1601..1693#1858..1953#2056..2157#3419..3468#4016..4747#4865..5028#5141..5337#5410..5565#5664..5873#6500..6883#gcgcgaaaccagaccatcgcaccgtccaccaccagtctcgtagcatcgtggcgccgcaccgcgccgtctccctctctctctctctctctctcttccccttcctcccctgaaacctaacgcgccaccgccaccgccgccgccgcctccctctcccaaatcttcgccgggaatcgcgacgatcaagccacgaggatcgctgctgctgctgcagcagctttgcctgtgcttaacgcccaggtataatgcggaccaggagccagcgcgacggccaccacgccgccgccgctgccgaaaccccgccttccggttcgtctccggccgcccgccgtgccgccgaaatccaccccccctcccccccccccaatcctgttcccacgaaccccgcctccgtcatcttcccaactgaaaccggtgtttgttcgtcccgcaggggcaagcggaggatcaggaggggacgttgcgaggggcggtggcacgcctcgccgtcgccggagggcttcgccggccgcggagaaagggaagtcgcccgccaaggtaaattaaattaaatcggtgtttgtgaaggactaaaggctctgtgcttgatttcctcattgcgacaagtcgagaactattttaccatctgtggcttgttcaggaacttcgggctctaaatgttccttgtggttaagcgcgattgttcgacatatgttcacattgtatgacttcaaactcgctaaactagtaaaattgatcaaaaatgctctgggtccttattatttattcaagtctaagttttgcactcttaaggagtgtaattgagtcggaagcatatgtcaaaaggatgccaaataattactatagaatgcattgattttgagacaaaaaaataaaccaactcgatgtgttgaatcatggataggttctggcttaggactctgaaggtttaatgatgttggtggattttaagtattactcctagctgatagggctcaactgctattgtctcttcaggtggaaatggaatcggcattggaggataaaagtaaaaacgttaaggtccatgcagagggttatgacgatgccgggatgacgaggttcggtagggatggctctgaaaagaacagtttggaggaagaagatccagatgcagctgatatggactgggaagaagggattgttttcgcggcggaacacgatgagtgttattcccatgagcttggagagacagtcaccgttgagttcactgatctaccctcttccactgaaaagaagactgctcggaggcttactgctgaagaaaaggtaaaatatttcttgagagaaattttcagttaaggcgtctgacacagatgagctcatggacatttgcattaagtttataacctgttactataagtctaattttatcgttgaaaatttttttataaaaaaattctatttgccttctaagagtttcctggcgccagctcatttgccaagttgtatgtaatgctcaggagtttcgtcacaagctttggaccatatctaaaagagtcactgccttttcctttcttgtgtgctttaaatatctttgttatctttgaattttgacctgttagttttatttctgattatccaggagttggctgaactcgtgcacagggtccatttgctttgcctactagcaaggggtagggtaattgacaaggcttgcaatgatcctctgattcaggtgcgagcattacagtggtattcattatttcatttacaccagattctgtatttctcatgttccaaaatgatgaagtggcattatgatttatgaatcatagtggttaaaacagaggtgtgtttcaaacagaattgtgtcaatattctttgaaatgttctttccaggcttcaattctctctgttttaccacaacatgtactacggaattctgtagacactccaattctgaaagctaatgaactgcgtagtcttgtgagctgggtaagtccccttcatatattattttattgactaaaaatgtgaagttttatgaaatagtagtttttagatgaaatcttttaatttgcatttatttgtctgcagttccacaacactttcagtgtaattgcacaatccgacgacaaggggtcttttaaatcaaatttggcatttgctcttcaaagttatgtaggcactgctgaagaggtatcatcttctccctgaagattatgctgtgaaacaaatctgctgtctttatttcagcaaacttatttttcttattcatgtttctcagatttggaaaacctaaaaagtgaataagagttgtcatatttcaatgccccaaaatatgttttccattgagatttgatatggattgtcaatgtctacttcatttcttttggaaaaaaaaacaatctttagttgccactgaaagttgacaccattggttatgtgccgtcaggaaacttggtctcccttcattgtcacccctaaatattgttctgttatttctattgtcgtctgcccttttaggtaaggttgccaccaacatataaaatactgtcagtttttttttctttttggggccaaaatagaaggacgagagactccagcagctcggtatgcgcatgccaagttggtggcatagagtgttccatcagtaactgtgcacaaaacaccaaaggcctaccgacatgactcttgcctatagtggtcatgagttacgcaccatgcagtaacactaccaaaggaaagcaagagatacattcacaggtcgacggtcgaccagtcttctcaccttggaacgagggagaatagggatgcattaacaagctgatcagtcctagggccatcaaacgcatggtgcaggtgtgctttctcatggcgtgaacaggtttcagtgcacaaacattgaaaccaataagcatacgaggtagaatgcgtcatgaggagtactgtgtagttgtcagtgggaatcaactatccttttgcaattccagtgaggaaatgctctgaaacaaatatggtaaaatgattgctttaggtaaagaaatatgggtatgggaacacatctttacgctgctgaaattgttcttggacccctggtgctccggttctcaatggggaagataatgatggagaggttccttgatgtcacaatggaaggaggatggagccagtgcacctggagtgaccatgactaccttgactcctttttggctggagaagatgcagaactgtcttttttttttgtggaccacttaacagcaaacttatacaggactgtcgagtggcaaataaggtaacaaaactctgaaggagtagcaatgaagggagaacttttcctatggcatataaggtataatgtcaactttcagtctttcaatggcaaataaaaaatctcctcttttgtaaaacaagacgctatttctgtttaaagctgccaaataattcgtttgcaatgcaggtttgtgcactttcagtggcattgtttagggctctcaacttaacagctaggtatggatttcactctgtaattagttttatgattgattccatccattccagaacgttagcataaaaaatccataaatcattttgcaatccattctcgtcgaatgctgtttgcttttgttccacgcaggtttataattatagtaaacagtttccatgatatgtattatatgtttaattccgtggtgaaaactggattttctgatctcttccagagaatagatttcttctttttctttgttctgataaaaaaaaagaatttgtcatattctaaagaagtggttcagtagaatggactcttaactaactttcaataaactacagtttgataaaatcctcgggtgcttgggttagaatagttgatattactcctccccagactgatttatttttttttcttcctatcgaacttcccataaagatcaaggaaatttcaattgtaagaccatctattatagttagtaaaagcgcatataaaggttcattatgttgtcctgtggttttgttcgataaccttctgaaccaattctaagtatagcttcccttctaggtttgttgcgaatctggatgttgctggtctcaagcctgacactaaatcaatggggacatcaaatcaggatgaacctaggctttgtacaaaggcgctgccatctagttcttttgttgcaggccataatgagtataataacctttcacctgtcctgtcacaaaacaatactgaaggtagcatcaatacaactccaaaacaagtcaaagttcaaggctgcaggaaaagtttgtctaaaaaattgtcgaagtgcaaggcaaatcagagagatagctctgcatcactatcaaaagatagctcatccagcagccaatatccttccacctccagtaatgctgaagtaccaagacgaaaaggggatttggaatttgagttgcagctggaaatggctcttttagcatctgcagctaaaagtcaagacaacaagctagcaactcaattaaatcagtcaactgatagcttactaagttcaactccaccattgaagaagttacgaaaaagtgaagaagcctcaagcaactcgagcgtggtttggtcgaggaatagagcaccgttattttgggctgaggtattttgtggtggcgaggcatcgtctggaagatgggtccatgttgatgttgcaaatgatattattgatggtgaacaaaaagtagaagctgcttccgctgtttgcaggaagcctttgagatatgttgttgcctttgctggaaatggtgctaaagatgtgaccagaaggtttacctctttcataattcctaacttagtagctatatagaatcatgaggatatattctttgcttttggaaatttgtaaaagaactggtttgagaactgtgttctatattttcctaggtattgcctgcaatggcacagaattgttcaggggagagtgaatcctgagtggtggaaaagtgttttggcacccctagagcgtcttgaattggcagcaacgaacaacactgaagaaatggaacttcagaccagggccttaacagagcctcttcctaccaatcaacaggcaatgcacttactgagtttacgatattggttaacttctagttatgccttttgcttctttcaaaggttgcctgttggcttttctaattatttatgtaaccataaccacttaggcctacaaagaccatcatctatatgcccttgagaagtggcttcacaagaaccaagttcttcaccccaaaggcccagtgcttggcttctgtaaagggaatcctgtttatcctagatcttgtgttcagacactgcaatcaagacatggatggttgcgggagggtctgcaagtcagagaaaatgagttgcctgcaaaggttcataatagaatcacagcgctagcagtttttttctgtcttcatgtgaagtaaccatttttctgtacacaggtcgtgacgcggccaaagaggactttcaattctcagtcaattcaatctaatagtaatagtaatgaagatgggcttaagccaaccatggaactatatggtaaatggcagctggaaccgctgcaacttccccatgcagtaaatggtattgtaccaaaggtagacctccttgattatgactattgattttcattaggtagctatcagtgcttattttgtggtgttccatgctgattaaatgctaaaatatgtccaagaatgagcgtggtcaagtcgatgtgtggtcagagaaatgtcttccgcctggtactgtacacctgaggttaccaagaatattccaggtcgcaaagagacttggaattgattttgccccagccatggttggatttgattatcgaaacacccggtgccttccagtttttgatggaattgttgtctgttccgaattcaaaaatactatcttagaggtatgctgagtacttgatttatttttcaaaattctggtcccattcatcctgctgtctacaattttagtcggatcctttatgcaatctgatgtggatgtttaattaggtaaaattattaacaatctttaacaatcacaaattagcccaaacctgttagcaccttagtcaaaagtgtgtgcttgaaaggtatttgcacactttgtaaatatttttattttgttttcttccccttgatgaaatgaaatgcagttctctcgttttcgagaaaaaaaaaggtatttgcataagcatgtttcataatagcgcttaactcattgttgagcatgtctcattataatgcactcaatgttatggaaagtagtgtaatgatcaagagtagaattgttatattcatgtatatgctagaggtagtgatggtattatagtctctaggttcctgtactctcttgcgtaacaagaactaacagggaaaattgctcagtaacactaatcactcgagttagaaaataacatcgatgtgtcactgtcatgtaggcctagggccaaagctaattctcctagtttcatcaggtacatacaaagctagctctatagttggtctaacttactcctacgctttctgccaggcatatgcagaacaagaggaacggagacaagccgaggagaggaagcaggaggaagctcaggctcttattaggtggtatcagctgctgtgttccgtcgtaaccacacagcggttgaaggactcttacaaagcaccctcatcagagcacggaccagaaggaccatcccaagatgttagtcagcagaagggcacacgcaaaagtcgaagctcggaaacgaagactcgctcaagcagactacaggcggaccgaccatttgattctccttttcctgtccatgaccatgagcatgagtatccagaggaagatcagagcttcgacgaagagacgtttgtgaggacgaaacgctgtccatgtggtttttcaatccaagttgaggaattgtagcaaaatgatatcagaaatgcactaacttaaggtgtagcctgtttttggtcccaggtgaactctcaaaactatggtagctgtgatgcttctgacgaatgcaggttttgatgcatttgtcttgagttgggagttaagagtgagtttgctaaacccatagttcagctgttgcactgaaatgaggtgttgaaagttgaagctgatggtatgaaatgtagtgggtgttaaaactgttaacagtatatgcttgtttaagtttcagcatagtgccatcacgctaagattttatcaaact</dnaseqindica> 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